Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2129295Fold c.66: S-adenosyl-L-methionine-dependent methyltransferases [53334] (1 superfamily)
    core: 3 layers, a/b/a; mixed beta-sheet of 7 strands, order 3214576; strand 7 is antiparallel to the rest
  4. 2129296Superfamily c.66.1: S-adenosyl-L-methionine-dependent methyltransferases [53335] (60 families) (S)
  5. 2129933Family c.66.1.25: mRNA cap methylase [88785] (3 protein domains)
  6. 2129978Protein automated matches [190302] (8 species)
    not a true protein

Species:

  1. 2129979Dengue virus 2 16681-pdk53 [TaxId:31635] [188733] (1 PDB entry)
  2. 2129981Dengue virus 3 [TaxId:11069] [189561] (2 PDB entries)
    1. Domains for 3p8z:
      1. 2129984Domain d3p8za_: 3p8z A: [183595]
        automated match to d1r6aa_
        protein/RNA complex; complexed with 36a, sah
      2. 2129985Domain d3p8zc_: 3p8z C: [183596]
        automated match to d1r6aa_
        protein/RNA complex; complexed with 36a, sah
    2. Domains for 3p97:
      1. 2129982Domain d3p97a_: 3p97 A: [183601]
        automated match to d1r6aa_
        complexed with sam
      2. 2129983Domain d3p97c_: 3p97 C: [183602]
        automated match to d1r6aa_
        complexed with sam
  3. 2129986Dengue virus [TaxId:12637] [189508] (1 PDB entry)
  4. 2129991Vaccinia virus [TaxId:10245] [187111] (2 PDB entries)
    1. Domain for 2ga9:
    2. Domain for 2gaf:
  5. 2129994West Nile virus [TaxId:11082] [187969] (2 PDB entries)
    1. Domains for 2oy0:
      1. 2129997Domain d2oy0a_: 2oy0 A: [166919]
        automated match to d1r6aa_
        complexed with sah
      2. 2129998Domain d2oy0b_: 2oy0 B: [166920]
        automated match to d1r6aa_
        complexed with sah
    2. Domains for 3lkz:
      1. 2129995Domain d3lkza_: 3lkz A: [247469]
        automated match to d2px8b_
        complexed with gol, sfg
      2. 2129996Domain d3lkzb_: 3lkz B: [247470]
        automated match to d2px8b_
        complexed with gol, sfg
  6. 2279497Zika virus (strain mr 766) [TaxId:64320] [322798] (7 PDB entries)
    1. Domain for 5kqs:
    2. Domains for 5mrk:
      1. 2285722Domain d5mrkb_: 5mrk B: [329023]
        automated match to d2xbma_
        complexed with cl, sfg
      2. 2285740Domain d5mrka_: 5mrk A: [329041]
        automated match to d2xbma_
        complexed with cl, sfg
    3. Domains for 5ulp:
      1. 2290983Domain d5ulpb_: 5ulp B: [334284]
        automated match to d2xbma_
        complexed with cl, ipa, kb1, na, ure
      2. 2290999Domain d5ulpa_: 5ulp A: [334300]
        automated match to d2xbma_
        complexed with cl, ipa, kb1, na, ure
    4. Domains for 5vim:
      1. 2295410Domain d5vima_: 5vim A: [338711]
        Other proteins in same PDB: d5vimb2
        automated match to d2px8a_
        complexed with sam, so4
      2. 2295419Domain d5vimb1: 5vim B:5-265 [338720]
        Other proteins in same PDB: d5vimb2
        automated match to d2px8a_
        complexed with sam, so4
    5. Domain for 5wxb:
    6. Domains for 5wz1:
      1. 2287560Domain d5wz1c_: 5wz1 C: [330861]
        automated match to d2px5a_
        complexed with sam
      2. 2287566Domain d5wz1g_: 5wz1 G: [330867]
        automated match to d2px5a_
        complexed with sam
      3. 2287571Domain d5wz1f_: 5wz1 F: [330872]
        automated match to d2px5a_
        complexed with sam
      4. 2287572Domain d5wz1e_: 5wz1 E: [330873]
        automated match to d2px5a_
        complexed with sam
      5. 2287581Domain d5wz1h_: 5wz1 H: [330882]
        automated match to d2px5a_
        complexed with sam
      6. 2287637Domain d5wz1a_: 5wz1 A: [330938]
        automated match to d2px5a_
        complexed with sam
      7. 2287649Domain d5wz1d_: 5wz1 D: [330950]
        automated match to d2px5a_
        complexed with sam
      8. 2287650Domain d5wz1b_: 5wz1 B: [330951]
        automated match to d2px5a_
        complexed with sam
    7. Domains for 5wz2:
      1. 2287595Domain d5wz2b_: 5wz2 B: [330896]
        automated match to d2px5a_
        complexed with gta, sam
      2. 2287625Domain d5wz2a_: 5wz2 A: [330926]
        automated match to d2px5a_
        complexed with gta, sam
      3. 2287647Domain d5wz2c_: 5wz2 C: [330948]
        automated match to d2px5a_
        complexed with gta, sam
  7. 2279510Zika virus [TaxId:64320] [322811] (2 PDB entries)
    1. Domain for 5kqr:
    2. Domains for 5m5b:
      1. 2284360Domain d5m5ba_: 5m5b A: [327661]
        automated match to d2px8b_
        complexed with cl, gol, sam, so4
      2. 2284363Domain d5m5bb_: 5m5b B: [327664]
        automated match to d2px8b_
        complexed with cl, gol, sam, so4
  8. 2281147Dengue virus type 3 (strain philippines/h87/1956) [TaxId:408870] [324448] (1 PDB entry)

More info for Protein automated matches from c.66.1.25: mRNA cap methylase

Timeline for Protein automated matches from c.66.1.25: mRNA cap methylase: