Species:

1. Dengue virus 2 16681-pdk53 [TaxId:31635] [188733] (1 PDB entry)

   • Domain for 3evg:

     • Domain d3evga_: 3evg A: [175250] automated match to d1l9ka_ protein/RNA complex; complexed with sah, so4

2. Dengue virus 3 [TaxId:11069] [189561] (3 PDB entries)

   1. Domains for 3p8z:

      1. Domain d3p8za_: 3p8z A: [183595] automated match to d1r6aa_ protein/RNA complex; complexed with 36a, sah

      2. Domain d3p8zc_: 3p8z C: [183596] automated match to d1r6aa_ protein/RNA complex; complexed with 36a, sah

   2. Domains for 3p97:

      1. Domain d3p97a_: 3p97 A: [183601] automated match to d1r6aa_ complexed with sam

      2. Domain d3p97c_: 3p97 C: [183602] automated match to d1r6aa_ complexed with sam

   3. Domains for 5e9q:

      1. Domain d5e9qa_: 5e9q A: [324449] automated match to d2xbma_ complexed with 5ky, sam

      2. Domain d5e9qc_: 5e9q C: [324481] automated match to d2xbma_ complexed with 5ky, sam

3. Dengue virus [TaxId:12637] [189508] (1 PDB entry)

   • Domains for 2xbm:

     1. Domain d2xbma_: 2xbm A: [169997] automated match to d1r6aa_ complexed with gol, sah, so4

     2. Domain d2xbmb_: 2xbm B: [169998] automated match to d1r6aa_ complexed with gol, sah, so4

     3. Domain d2xbmc_: 2xbm C: [169999] automated match to d1r6aa_ complexed with gol, sah, so4

     4. Domain d2xbmd_: 2xbm D: [170000] automated match to d1r6aa_ complexed with gol, sah, so4

4. Human betacoronavirus 2c EMC/2012 [TaxId:1235996] [419989] (12 PDB entries)

   1. Domain for 5yn5:

      • Domain d5yn5a_: 5yn5 A: [410736] Other proteins in same PDB: d5yn5b_ automated match to d2xyqa_ complexed with zn

   2. Domain for 5yn6:

      • Domain d5yn6a_: 5yn6 A: [410737] Other proteins in same PDB: d5yn6b_ automated match to d2xyqa_ complexed with sam, zn

   3. Domain for 5yn8:

      • Domain d5yn8a_: 5yn8 A: [410738] Other proteins in same PDB: d5yn8b_ automated match to d2xyqa_ complexed with sah, zn

   4. Domain for 5ynb:

      • Domain d5ynba_: 5ynb A: [410739] Other proteins in same PDB: d5ynbb_ automated match to d2xyqa_ complexed with sfg, zn

   5. Domain for 5ynf:

      • Domain d5ynfa_: 5ynf A: [410740] Other proteins in same PDB: d5ynfb_ automated match to d2xyqa_ complexed with gta, zn

   6. Domain for 5yni:

      • Domain d5ynia_: 5yni A: [410741] Other proteins in same PDB: d5ynib_ automated match to d2xyqa_ complexed with gtg, sam, zn

   7. Domain for 5ynj:

      • Domain d5ynja_: 5ynj A: [410742] Other proteins in same PDB: d5ynjb_ automated match to d2xyqa_ complexed with gtg, zn

   8. Domain for 5ynm:

      • Domain d5ynma_: 5ynm A: [410744] Other proteins in same PDB: d5ynmb_ automated match to d2xyqa_ complexed with gta, sam, zn

   9. Domain for 5ynn:

      • Domain d5ynna_: 5ynn A: [410745] Other proteins in same PDB: d5ynnb_ automated match to d2xyqa_ complexed with gtg, sfg, zn

   10. Domain for 5yno:

       • Domain d5ynoa_: 5yno A: [410746] Other proteins in same PDB: d5ynob_ automated match to d2xyqa_ complexed with gta, sah, zn

   11. Domain for 5ynp:

       • Domain d5ynpa_: 5ynp A: [410747] Other proteins in same PDB: d5ynpb_ automated match to d2xyqa_ complexed with gta, sfg, zn

   12. Domain for 5ynq:

       • Domain d5ynqa_: 5ynq A: [410748] Other proteins in same PDB: d5ynqb_ automated match to d2xyqa_ complexed with gtg, sah, zn

5. Human coronavirus oc43 [TaxId:31631] [420140] (1 PDB entry)

   • Domain for 7nh7:

     • Domain d7nh7a_: 7nh7 A: [412645] Other proteins in same PDB: d7nh7b_ automated match to d2xyqa_ complexed with sfg, zn

6. SARS coronavirus [TaxId:227859] [419868] (1 PDB entry)

   • Domain for 3r24:

     • Domain d3r24a_: 3r24 A: [408641] Other proteins in same PDB: d3r24b1, d3r24b2 automated match to d2xyqa_ complexed with sam, zn

7. Severe acute respiratory syndrome coronavirus 2 [TaxId:2697049] [420071] (20 PDB entries)

   1. Domain for 6w4h:

      • Domain d6w4ha1: 6w4h A:6799-7096 [412065] Other proteins in same PDB: d6w4ha2, d6w4hb_ automated match to d2xyqa_ complexed with act, bdf, sam, so3, zn

   2. Domain for 6w61:

      • Domain d6w61a_: 6w61 A: [412068] Other proteins in same PDB: d6w61b_ automated match to d2xyqa_ complexed with cl, edo, sam, zn

   3. Domains for 6w75:

      1. Domain d6w75a_: 6w75 A: [412070] Other proteins in same PDB: d6w75b_, d6w75d_ automated match to d2xyqa_ complexed with fmt, na, sam, zn

      2. Domain d6w75c_: 6w75 C: [412071] Other proteins in same PDB: d6w75b_, d6w75d_ automated match to d2xyqa_ complexed with fmt, na, sam, zn

   4. Domains for 6wjt:

      1. Domain d6wjta_: 6wjt A: [412092] Other proteins in same PDB: d6wjtb_, d6wjtd_ automated match to d2xyqa_ complexed with fmt, na, sah, zn

      2. Domain d6wjtc_: 6wjt C: [412093] Other proteins in same PDB: d6wjtb_, d6wjtd_ automated match to d2xyqa_ complexed with fmt, na, sah, zn

   5. Domains for 6wkq:

      1. Domain d6wkqa_: 6wkq A: [412097] Other proteins in same PDB: d6wkqb_, d6wkqd_ automated match to d2xyqa_ complexed with fmt, na, sfg, zn

      2. Domain d6wkqc_: 6wkq C: [412098] Other proteins in same PDB: d6wkqb_, d6wkqd_ automated match to d2xyqa_ complexed with fmt, na, sfg, zn

   6. Domain for 6wq3:

      • Domain d6wq3a1: 6wq3 A:6799-7096 [412119] Other proteins in same PDB: d6wq3a2, d6wq3b_ automated match to d2xyqa_ complexed with 8nk, gta, sah, so4, zn

   7. Domain for 6wrz:

      • Domain d6wrza1: 6wrz A:6799-7096 [412126] Other proteins in same PDB: d6wrza2, d6wrzb_ automated match to d2xyqa_ protein/RNA complex; complexed with cl, gta, mgp, sah, so4, zn

   8. Domain for 6wvn:

      • Domain d6wvna1: 6wvn A:6799-7096 [412137] Other proteins in same PDB: d6wvna2, d6wvnb_ automated match to d2xyqa_ complexed with ade, cl, gta, mgp, sam, so4, zn

   9. Domain for 6xkm:

      • Domain d6xkma_: 6xkm A: [412168] Other proteins in same PDB: d6xkmb_ automated match to d2xyqa_ complexed with cl, sam, zn

   10. Domain for 6yz1:

       • Domain d6yz1a_: 6yz1 A: [412235] Other proteins in same PDB: d6yz1b_ automated match to d2xyqa_ complexed with mes, sfg, zn

   11. Domain for 7bq7:

       • Domain d7bq7a_: 7bq7 A: [412364] Other proteins in same PDB: d7bq7b_ automated match to d2xyqa_ complexed with sam, zn

   12. Domain for 7c2i:

       • Domain d7c2ia_: 7c2i A: [412377] Other proteins in same PDB: d7c2ib_ automated match to d2xyqa_ complexed with sam, zn

   13. Domain for 7c2j:

       • Domain d7c2ja_: 7c2j A: [412378] Other proteins in same PDB: d7c2jb_ automated match to d2xyqa_ complexed with sam, zn

   14. Domain for 7jhe:

       • Domain d7jhea1: 7jhe A:1-298 [412483] Other proteins in same PDB: d7jhea2, d7jheb_ automated match to d2xyqa_ complexed with cl, mgp, sah, v9g, zn

   15. Domain for 7jib:

       • Domain d7jiba1: 7jib A:1-298 [412485] Other proteins in same PDB: d7jiba2, d7jibb_ automated match to d2xyqa_ complexed with cl, gta, mgp, sah, sam, v9g, zn

   16. Domain for 7jpe:

       • Domain d7jpea1: 7jpe A:1-298 [412501] Other proteins in same PDB: d7jpea2, d7jpeb_ automated match to d2xyqa_ complexed with 8nk, gta, sam, zn

   17. Domain for 7koa:

       • Domain d7koaa_: 7koa A: [412563] Other proteins in same PDB: d7koab_ automated match to d2xyqa_ complexed with gta, sam, zn

   18. Domain for 7lw3:

       • Domain d7lw3a_: 7lw3 A: [412620] Other proteins in same PDB: d7lw3b_ automated match to d2xyqa_ complexed with edo, mes, mg, sah, yg4, zn

   19. Domain for 7lw4:

       • Domain d7lw4a_: 7lw4 A: [412621] Other proteins in same PDB: d7lw4b_ automated match to d2xyqa_ complexed with act, edo, mes, sah, zn

   20. Domain for 7r1u:

       • Domain d7r1ua_: 7r1u A: [422783] Other proteins in same PDB: d7r1ub_ automated match to d6w61a_ complexed with 4ik, gta, mes, zn

8. Vaccinia virus [TaxId:10245] [187111] (2 PDB entries)

   1. Domain for 2ga9:

      • Domain d2ga9a_: 2ga9 A: [134885] Other proteins in same PDB: d2ga9d1 automated match to d1vpt__ complexed with ags, ca

   2. Domain for 2gaf:

      • Domain d2gafa_: 2gaf A: [134888] Other proteins in same PDB: d2gafd_ automated match to d1vpt__

9. West Nile virus [TaxId:11082] [187969] (2 PDB entries)

   1. Domains for 2oy0:

      1. Domain d2oy0a_: 2oy0 A: [166919] automated match to d1r6aa_ complexed with sah

      2. Domain d2oy0b_: 2oy0 B: [166920] automated match to d1r6aa_ complexed with sah

   2. Domains for 3lkz:

      1. Domain d3lkza_: 3lkz A: [247469] automated match to d2px8b_ complexed with gol, sfg

      2. Domain d3lkzb_: 3lkz B: [247470] automated match to d2px8b_ complexed with gol, sfg

10. Zika virus (strain mr 766) [TaxId:64320] [322798] (8 PDB entries)

    1. Domain for 5kqs:

       • Domain d5kqsa_: 5kqs A: [322799] automated match to d2px8b_ complexed with act, gol, m7g, po4, sam

    2. Domains for 5mrk:

       1. Domain d5mrka_: 5mrk A: [329041] automated match to d2xbma_ complexed with cl, sfg

       2. Domain d5mrkb_: 5mrk B: [329023] automated match to d2xbma_ complexed with cl, sfg

    3. Domains for 5njv:

       1. Domain d5njva_: 5njv A: [346916] automated match to d5wxba_ complexed with cl, sam

       2. Domain d5njvb_: 5njv B: [347112] automated match to d5wxba_ complexed with cl, sam

       3. Domain d5njvc_: 5njv C: [347073] automated match to d5wxba_ complexed with cl, sam

       4. Domain d5njvd_: 5njv D: [347207] automated match to d5wxba_ complexed with cl, sam

    4. Domains for 5ulp:

       1. Domain d5ulpa_: 5ulp A: [334300] automated match to d2xbma_ complexed with cl, ipa, kb1, na, ure

       2. Domain d5ulpb_: 5ulp B: [334284] automated match to d2xbma_ complexed with cl, ipa, kb1, na, ure

    5. Domains for 5vim:

       1. Domain d5vima_: 5vim A: [338711] Other proteins in same PDB: d5vimb2 automated match to d2px8a_ complexed with sam, so4

       2. Domain d5vimb1: 5vim B:5-265 [338720] Other proteins in same PDB: d5vimb2 automated match to d2px8a_ complexed with sam, so4

    6. Domain for 5wxb:

       • Domain d5wxba_: 5wxb A: [334428] automated match to d2xbma_ complexed with sah

    7. Domains for 5wz1:

       1. Domain d5wz1a_: 5wz1 A: [330938] automated match to d2px5a_ complexed with sam

       2. Domain d5wz1b_: 5wz1 B: [330951] automated match to d2px5a_ complexed with sam

       3. Domain d5wz1c_: 5wz1 C: [330861] automated match to d2px5a_ complexed with sam

       4. Domain d5wz1d_: 5wz1 D: [330950] automated match to d2px5a_ complexed with sam

       5. Domain d5wz1e_: 5wz1 E: [330873] automated match to d2px5a_ complexed with sam

       6. Domain d5wz1f_: 5wz1 F: [330872] automated match to d2px5a_ complexed with sam

       7. Domain d5wz1g_: 5wz1 G: [330867] automated match to d2px5a_ complexed with sam

       8. Domain d5wz1h_: 5wz1 H: [330882] automated match to d2px5a_ complexed with sam

    8. Domains for 5wz2:

       1. Domain d5wz2a_: 5wz2 A: [330926] automated match to d2px5a_ complexed with gta, sam

       2. Domain d5wz2b_: 5wz2 B: [330896] automated match to d2px5a_ complexed with gta, sam

       3. Domain d5wz2c_: 5wz2 C: [330948] automated match to d2px5a_ complexed with gta, sam

11. Zika virus [TaxId:64320] [322811] (3 PDB entries)

    1. Domain for 5kqr:

       • Domain d5kqra_: 5kqr A: [322812] automated match to d2px8b_ complexed with cl, po4, sam

    2. Domains for 5m5b:

       1. Domain d5m5ba_: 5m5b A: [327661] automated match to d2px8b_ complexed with cl, gol, sam, so4

       2. Domain d5m5bb_: 5m5b B: [327664] automated match to d2px8b_ complexed with cl, gol, sam, so4

    3. Domains for 5nju:

       1. Domain d5njua_: 5nju A: [346877] automated match to d5wxba_ complexed with mg, sah

       2. Domain d5njub_: 5nju B: [346902] automated match to d5wxba_ complexed with mg, sah

More info for Protein automated matches from c.66.1.25: mRNA cap methylase

Timeline for Protein automated matches from c.66.1.25: mRNA cap methylase:

• Protein automated matches from c.66.1.25: mRNA cap methylase first appeared in SCOPe 2.01
  
• Protein automated matches from c.66.1.25: mRNA cap methylase appears in SCOPe 2.07