Lineage for Protein: automated matches

  1. Root: SCOPe 2.04
  2. 1631855Class d: Alpha and beta proteins (a+b) [53931] (380 folds)
  3. 1632226Fold d.2: Lysozyme-like [53954] (1 superfamily)
    common alpha+beta motif for the active site region
  4. 1632227Superfamily d.2.1: Lysozyme-like [53955] (12 families) (S)
  5. 1632263Family d.2.1.2: C-type lysozyme [53960] (3 proteins)
    automatically mapped to Pfam PF00062
  6. 1633211Protein automated matches [190299] (5 species)
    not a true protein

Species:

  1. 1633212Chicken (Gallus gallus) [TaxId:9031] [196365] (9 PDB entries)
    1. Domain for 3b6l:
    2. Domain for 3b72:
    3. Domain for 3qy4:
    4. Domain for 3tmu:
    5. Domain for 3tmv:
    6. Domain for 3tmw:
    7. Domain for 3tmx:
    8. Domain for 4cj2:
    9. Domain for 4mwn:
  2. 1633222Cow (Bos taurus) [TaxId:9913] [187106] (2 PDB entries)
    1. Domains for 2g4n:
      1. 1633224Domain d2g4na_: 2g4n A: [134598]
        automated match to d1f6ra_
        complexed with ca, k
      2. 1633225Domain d2g4nb_: 2g4n B: [134599]
        automated match to d1f6ra_
        complexed with ca, k
      3. 1633226Domain d2g4nc_: 2g4n C: [134600]
        automated match to d1f6ra_
        complexed with ca, k
      4. 1633227Domain d2g4nd_: 2g4n D: [134601]
        automated match to d1f6ra_
        complexed with ca, k
      5. 1633228Domain d2g4ne_: 2g4n E: [134602]
        automated match to d1f6ra_
        complexed with ca, k
      6. 1633229Domain d2g4nf_: 2g4n F: [134603]
        automated match to d1f6ra_
        complexed with ca, k
    2. Domain for 2z2f:
  3. 1633230Dog (Canis familiaris) [TaxId:9615] [188283] (1 PDB entry)
  4. 1633233Human (Homo sapiens) [TaxId:9606] [188701] (6 PDB entries)
    1. Domain for 2zil:
    2. Domain for 2zwb:
    3. Domain for 3b0i:
    4. Domains for 3b0o:
      1. 1633235Domain d3b0oa_: 3b0o A: [199000]
        automated match to d3b0ob_
        complexed with ca
      2. 1633236Domain d3b0ob_: 3b0o B: [195182]
        automated match to d1hmla_
        complexed with ca
    5. Domain for 3eba:
    6. Domain for 3fe0:
  5. 1633241Pelodiscus sinensis [TaxId:13735] [187773] (1 PDB entry)

More info for Protein automated matches from d.2.1.2: C-type lysozyme

Timeline for Protein automated matches from d.2.1.2: C-type lysozyme: