Lineage for Protein: automated matches

  1. Root: SCOPe 2.05
  2. 1815291Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 1878506Fold c.93: Periplasmic binding protein-like I [53821] (1 superfamily)
    consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
    parallel beta-sheet of 6 strands, order 213456
  4. 1878507Superfamily c.93.1: Periplasmic binding protein-like I [53822] (2 families) (S)
    Similar in architecture to the superfamily II but partly differs in topology
  5. 1878508Family c.93.1.1: L-arabinose binding protein-like [53823] (18 proteins)
  6. 1878736Protein automated matches [190296] (9 species)
    not a true protein

Species:

  1. 1878737Actinobacillus succinogenes [TaxId:339671] [273094] (1 PDB entry)
  2. 1878739Bacillus anthracis [TaxId:198094] [238505] (1 PDB entry)
  3. 1878741Escherichia coli K-12 [TaxId:83333] [187775] (6 PDB entries)
    1. Domain for 1z15:
    2. Domain for 1z16:
    3. Domain for 1z17:
    4. Domain for 1z18:
    5. Domain for 2gx6:
    6. Domains for 3edc:
      1. 1878746Domain d3edca_: 3edc A: [245821]
        automated match to d1tlfa_
        complexed with hez
      2. 1878747Domain d3edcb_: 3edc B: [245822]
        automated match to d1tlfa_
        complexed with hez
      3. 1878748Domain d3edcc_: 3edc C: [245823]
        automated match to d1tlfa_
        complexed with hez
      4. 1878749Domain d3edcd_: 3edc D: [245824]
        automated match to d1tlfa_
        complexed with hez
  4. 1878751Human (Homo sapiens) [TaxId:9606] [189164] (3 PDB entries)
    1. Domain for 2wjw:
    2. Domains for 3ks9:
      1. 1878753Domain d3ks9a_: 3ks9 A: [179640]
        automated match to d1ewkb_
        complexed with mg, nag, z99
      2. 1878754Domain d3ks9b_: 3ks9 B: [179641]
        automated match to d1ewkb_
        complexed with mg, nag, z99
    3. Domains for 3lmk:
      1. 1878755Domain d3lmka_: 3lmk A: [180393]
        automated match to d1ewkb_
        complexed with glu, mg, nag
      2. 1878756Domain d3lmkb_: 3lmk B: [180394]
        automated match to d1ewkb_
        complexed with glu, mg, nag
  5. 1878757Norway rat (Rattus norvegicus) [TaxId:10116] [267861] (3 PDB entries)
    1. Domains for 3o21:
      1. 1878759Domain d3o21a_: 3o21 A: [265101]
        automated match to d3h5va_
        complexed with nag, po4
      2. 1878760Domain d3o21b_: 3o21 B: [265102]
        automated match to d3h5va_
        complexed with nag, po4
      3. 1878761Domain d3o21c_: 3o21 C: [265103]
        automated match to d3h5va_
        complexed with nag, po4
      4. 1878762Domain d3o21d_: 3o21 D: [265104]
        automated match to d3h5va_
        complexed with nag, po4
    2. Domains for 3saj:
      1. 1878763Domain d3saja_: 3saj A: [265346]
        automated match to d3h5va_
        complexed with nag
      2. 1878764Domain d3sajb_: 3saj B: [265347]
        automated match to d3h5va_
        complexed with nag
      3. 1878765Domain d3sajc_: 3saj C: [265348]
        automated match to d3h5va_
        complexed with nag
      4. 1878766Domain d3sajd_: 3saj D: [265349]
        automated match to d3h5va_
        complexed with nag
    3. Domain for 4gpa:
  6. 1878767Rhizobium meliloti (Sinorhizobium meliloti) [TaxId:382] [188703] (1 PDB entry)
  7. 1878770Streptobacillus moniliformis [TaxId:519441] [271603] (1 PDB entry)
  8. 1878772Thermoanaerobacter tengcongensis [TaxId:119072] [187869] (1 PDB entry)
  9. 1878775Yersinia pestis [TaxId:214092] [226264] (1 PDB entry)

More info for Protein automated matches from c.93.1.1: L-arabinose binding protein-like

Timeline for Protein automated matches from c.93.1.1: L-arabinose binding protein-like: