Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1981147Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (14 superfamilies)
    core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down
  4. 1982196Superfamily a.4.5: "Winged helix" DNA-binding domain [46785] (85 families) (S)
    contains a small beta-sheet (wing)
  5. 1982915Family a.4.5.28: MarR-like transcriptional regulators [63379] (20 protein domains)
    The N- and C-terminal helical extensions to the common fold form the dimer interface
  6. 1983015Protein automated matches [190294] (6 species)
    not a true protein

Species:

  1. 1983016Deinococcus radiodurans [TaxId:1299] [187697] (2 PDB entries)
    1. Domain for 2fbk:
    2. Domains for 5dd8:
      1. 1983018Domain d5dd8a_: 5dd8 A: [276705]
        automated match to d2fbka1
        complexed with cl; mutant
      2. 1983019Domain d5dd8b_: 5dd8 B: [276704]
        automated match to d2fbka1
        complexed with cl; mutant
  2. 1983020Escherichia coli K-12 [TaxId:83333] [193218] (4 PDB entries)
    1. Domains for 3vb2:
      1. 1983021Domain d3vb2a_: 3vb2 A: [194054]
        automated match to d1jgsa_
      2. 1983022Domain d3vb2b_: 3vb2 B: [194053]
        automated match to d1jgsa_
    2. Domains for 3vod:
      1. 1983027Domain d3voda_: 3vod A: [193220]
        automated match to d1jgsa_
        mutant
      2. 1983028Domain d3vodb_: 3vod B: [193221]
        automated match to d1jgsa_
        mutant
    3. Domains for 3voe:
      1. 1983023Domain d3voea_: 3voe A: [193219]
        automated match to d1jgsa_
      2. 1983024Domain d3voeb_: 3voe B: [201250]
        automated match to d3voea_
    4. Domains for 4jba:
      1. 1983025Domain d4jbaa_: 4jba A: [228343]
        automated match to d3vb2b_
      2. 1983026Domain d4jbab_: 4jba B: [234952]
        automated match to d4jbaa_
  3. 1983029Staphylococcus aureus [311136] (1 PDB entry)
  4. 1983031Thermotoga maritima [TaxId:2336] [187380] (1 PDB entry)
  5. 1983035Yersinia pseudotuberculosis [TaxId:502800] [193529] (1 PDB entry)
  6. 2276885Pseudomonas aeruginosa [TaxId:287] [320186] (1 PDB entry)

More info for Protein automated matches from a.4.5.28: MarR-like transcriptional regulators

Timeline for Protein automated matches from a.4.5.28: MarR-like transcriptional regulators: