Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2299346Class a: All alpha proteins [46456] (289 folds)
  3. 2316392Fold a.28: Acyl carrier protein-like [47335] (3 superfamilies)
    4 helices, bundle; helix 3 is shorter than others; up-and-down
  4. 2316393Superfamily a.28.1: ACP-like [47336] (4 families) (S)
  5. 2316394Family a.28.1.1: Acyl-carrier protein (ACP) [47337] (7 protein domains)
  6. 2316457Protein automated matches [190286] (9 species)
    not a true protein

Species:

  1. 2316458Agrobacterium tumefaciens [TaxId:176299] [226607] (3 PDB entries)
    1. Domains for 4h2w:
      1. 2316459Domain d4h2wc1: 4h2w C:1-77 [222342]
        Other proteins in same PDB: d4h2wc2
        automated match to d2jq4a1
        protein/RNA complex; complexed with 5gp, amp, cl, pns, zn
      2. 2316460Domain d4h2wd_: 4h2w D: [222343]
        Other proteins in same PDB: d4h2wc2
        automated match to d2jq4a1
        protein/RNA complex; complexed with 5gp, amp, cl, pns, zn
    2. Domains for 4h2x:
      1. 2316463Domain d4h2xc1: 4h2x C:1-76 [222344]
        Other proteins in same PDB: d4h2xc2
        automated match to d2jq4a1
        protein/RNA complex; complexed with cl, g5a, pns, zn
      2. 2316464Domain d4h2xd_: 4h2x D: [222345]
        Other proteins in same PDB: d4h2xc2
        automated match to d2jq4a1
        protein/RNA complex; complexed with cl, g5a, pns, zn
    3. Domains for 4h2y:
      1. 2316461Domain d4h2yc1: 4h2y C:1-76 [222346]
        Other proteins in same PDB: d4h2yc2
        automated match to d2jq4a1
        protein/RNA complex; complexed with atp, mg, pns, zn
      2. 2316462Domain d4h2yd_: 4h2y D: [222347]
        Other proteins in same PDB: d4h2yc2
        automated match to d2jq4a1
        protein/RNA complex; complexed with atp, mg, pns, zn
  2. 2316465Aquifex aeolicus [TaxId:224324] [187667] (2 PDB entries)
    1. Domain for 2ehs:
    2. Domain for 2eht:
  3. 2316468Bacillus subtilis [TaxId:224308] [189280] (1 PDB entry)
  4. 2316470Escherichia coli [TaxId:562] [187089] (2 PDB entries)
    1. Domains for 2fae:
      1. 2316471Domain d2faea_: 2fae A: [133193]
        automated match to d1acp__
        complexed with pm8, pse, zn
      2. 2316472Domain d2faeb_: 2fae B: [133194]
        automated match to d1acp__
        complexed with pm8, pse, zn
    2. Domain for 3ny7:
  5. 2316474Escherichia coli [TaxId:885275] [228942] (3 PDB entries)
    1. Domains for 4ihf:
      1. 2316475Domain d4ihfg_: 4ihf G: [228943]
        automated match to d3ejda_
        complexed with 1f7, cl
      2. 2316476Domain d4ihfh_: 4ihf H: [234851]
        automated match to d4ihfg_
        complexed with 1f7, cl
      3. 2316477Domain d4ihfi_: 4ihf I: [234852]
        automated match to d4ihfg_
        complexed with 1f7, cl
      4. 2316478Domain d4ihfj_: 4ihf J: [234853]
        automated match to d4ihfg_
        complexed with 1f7, cl
      5. 2316479Domain d4ihfk_: 4ihf K: [234854]
        automated match to d4ihfg_
        complexed with 1f7, cl
      6. 2316480Domain d4ihfl_: 4ihf L: [234855]
        automated match to d4ihfg_
        complexed with 1f7, cl
    2. Domains for 4ihg:
      1. 2316485Domain d4ihgg_: 4ihg G: [234857]
        automated match to d4ihfg_
        complexed with ftt, pns
      2. 2316486Domain d4ihgh_: 4ihg H: [234856]
        automated match to d4ihfg_
        complexed with ftt, pns
      3. 2316487Domain d4ihgi_: 4ihg I: [234858]
        automated match to d4ihfg_
        complexed with ftt, pns
      4. 2316488Domain d4ihgj_: 4ihg J: [234859]
        automated match to d4ihfg_
        complexed with ftt, pns
      5. 2316489Domain d4ihgk_: 4ihg K: [234860]
        automated match to d4ihfg_
        complexed with ftt, pns
    3. Domains for 4ihh:
      1. 2316481Domain d4ihhg_: 4ihh G: [234861]
        Other proteins in same PDB: d4ihhj2
        automated match to d4ihfg_
        complexed with mes, pns
      2. 2316482Domain d4ihhi_: 4ihh I: [234862]
        Other proteins in same PDB: d4ihhj2
        automated match to d4ihfg_
        complexed with mes, pns
      3. 2316483Domain d4ihhj1: 4ihh J:0-74 [234863]
        Other proteins in same PDB: d4ihhj2
        automated match to d4ihfg_
        complexed with mes, pns
      4. 2316484Domain d4ihhk_: 4ihh K: [234864]
        Other proteins in same PDB: d4ihhj2
        automated match to d4ihfg_
        complexed with mes, pns
  6. 2316490Human (Homo sapiens) [TaxId:9606] [187542] (1 PDB entry)
  7. 2316492Rattus norvegicus [311163] (1 PDB entry)
  8. 2316494Thermus thermophilus HB8 [TaxId:300852] [188109] (1 PDB entry)
  9. 2316496Vibrio harveyi [TaxId:673519] [255394] (1 PDB entry)

More info for Protein automated matches from a.28.1.1: Acyl-carrier protein (ACP)

Timeline for Protein automated matches from a.28.1.1: Acyl-carrier protein (ACP):