Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2127256Fold c.57: Molybdenum cofactor biosynthesis proteins [53217] (1 superfamily)
    3 layers: a/b/a; mixed beta-sheet of 5 strands; order: 21354, strand 5 is antiparallel to the rest; permutation of the Phosphorylase/hydrolase-like fold
  4. 2127257Superfamily c.57.1: Molybdenum cofactor biosynthesis proteins [53218] (3 families) (S)
  5. 2127399Family c.57.1.0: automated matches [191349] (1 protein)
    not a true family
  6. 2127400Protein automated matches [190284] (9 species)
    not a true protein

Species:

  1. 2127401Mycobacterium abscessus [TaxId:561007] [256097] (1 PDB entry)
  2. 2127404Mycobacterium avium [TaxId:1770] [226050] (1 PDB entry)
  3. 2127406Mycobacterium avium [TaxId:243243] [225961] (1 PDB entry)
  4. 2127408Mycobacterium ulcerans [TaxId:362242] [260972] (1 PDB entry)
  5. 2127415Norway rat (Rattus norvegicus) [TaxId:10116] [259256] (7 PDB entries)
    1. Domain for 4pd0:
    2. Domain for 5erq:
    3. Domain for 5err:
    4. Domain for 5ers:
    5. Domain for 5ert:
    6. Domain for 5eru:
    7. Domain for 5erv:
  6. 2127417Pyrococcus furiosus [TaxId:186497] [235373] (1 PDB entry)
  7. 2127421Shewanella oneidensis [TaxId:70863] [187084] (2 PDB entries)
    1. Domains for 2f7w:
      1. 2127422Domain d2f7wb_: 2f7w B: [133107]
        Other proteins in same PDB: d2f7wa1
        automated match to d1di6a_
      2. 2127423Domain d2f7wc_: 2f7w C: [133108]
        Other proteins in same PDB: d2f7wa1
        automated match to d1di6a_
    2. Domains for 2f7y:
      1. 2127424Domain d2f7ya_: 2f7y A: [133110]
        automated match to d1di6a_
      2. 2127425Domain d2f7yb_: 2f7y B: [133111]
        automated match to d1di6a_
      3. 2127426Domain d2f7yc_: 2f7y C: [133112]
        automated match to d1di6a_
  8. 2127427Sulfolobus tokodaii [TaxId:111955] [189061] (2 PDB entries)
    1. Domains for 2pjk:
      1. 2127428Domain d2pjka_: 2pjk A: [304348]
        automated match to d3iwta_
        complexed with gol, mg, na, peg, trs
      2. 2127429Domain d2pjkb_: 2pjk B: [304349]
        automated match to d3iwta_
        complexed with gol, mg, na, peg, trs
      3. 2127430Domain d2pjkc_: 2pjk C: [304350]
        automated match to d3iwta_
        complexed with gol, mg, na, peg, trs
    2. Domains for 3iwt:
      1. 2127431Domain d3iwta_: 3iwt A: [178657]
        automated match to d1y5ea1
        complexed with gol, mg, peg
      2. 2127432Domain d3iwtb_: 3iwt B: [178658]
        automated match to d1y5ea1
        complexed with gol, mg, peg
      3. 2127433Domain d3iwtc_: 3iwt C: [178659]
        automated match to d1y5ea1
        complexed with gol, mg, peg
  9. 2127434Thermus thermophilus HB8 [TaxId:300852] [225367] (2 PDB entries)
    1. Domains for 2is8:
      1. 2127435Domain d2is8a_: 2is8 A: [204849]
        automated match to d3k6af_
        complexed with fmt
      2. 2127436Domain d2is8b_: 2is8 B: [204850]
        automated match to d3k6af_
        complexed with fmt
      3. 2127437Domain d2is8c_: 2is8 C: [204851]
        automated match to d3k6af_
        complexed with fmt
    2. Domains for 3mch:
      1. 2127438Domain d3mcha_: 3mch A: [213195]
        automated match to d3k6af_
        complexed with edo
      2. 2127439Domain d3mchb_: 3mch B: [213196]
        automated match to d3k6af_
        complexed with edo
      3. 2127440Domain d3mchc_: 3mch C: [213197]
        automated match to d3k6af_
        complexed with edo

More info for Protein automated matches from c.57.1.0: automated matches

Timeline for Protein automated matches from c.57.1.0: automated matches: