Lineage for Protein: automated matches

  1. Root: SCOPe 2.04
  2. 1473060Class a: All alpha proteins [46456] (285 folds)
  3. 1506148Fold a.138: Multiheme cytochromes [48694] (1 superfamily)
    variable number of helices and little beta structure; not a true fold
  4. 1506149Superfamily a.138.1: Multiheme cytochromes [48695] (4 families) (S)
    duplication: contains multiple CxxCH motifs
  5. 1506280Family a.138.1.3: Di-heme elbow motif [48711] (8 proteins)
    the main characteristic feature of this motif is the packing of its two hemes
    many members contains one or more complete motifs flanked by incomplete motifs and/or other domains
  6. 1506374Protein automated matches [190276] (9 species)
    not a true protein

Species:

  1. 1506375Desulfovibrio vulgaris [TaxId:882] [187896] (2 PDB entries)
    1. Domains for 2j7a:
      1. 1506376Domain d2j7aa_: 2j7a A: [165927]
        automated match to d1oaha_
        complexed with act, ca, hem, lmt
      2. 1506377Domain d2j7ab_: 2j7a B: [165928]
        automated match to d1oaha_
        complexed with act, ca, hem, lmt
      3. 1506378Domain d2j7ad_: 2j7a D: [165929]
        automated match to d1oaha_
        complexed with act, ca, hem, lmt
      4. 1506379Domain d2j7ae_: 2j7a E: [165930]
        automated match to d1oaha_
        complexed with act, ca, hem, lmt
      5. 1506380Domain d2j7ag_: 2j7a G: [165931]
        automated match to d1oaha_
        complexed with act, ca, hem, lmt
      6. 1506381Domain d2j7ah_: 2j7a H: [165932]
        automated match to d1oaha_
        complexed with act, ca, hem, lmt
      7. 1506382Domain d2j7aj_: 2j7a J: [165933]
        automated match to d1oaha_
        complexed with act, ca, hem, lmt
      8. 1506383Domain d2j7ak_: 2j7a K: [165934]
        automated match to d1oaha_
        complexed with act, ca, hem, lmt
      9. 1506384Domain d2j7am_: 2j7a M: [165935]
        automated match to d1oaha_
        complexed with act, ca, hem, lmt
      10. 1506385Domain d2j7an_: 2j7a N: [165936]
        automated match to d1oaha_
        complexed with act, ca, hem, lmt
      11. 1506386Domain d2j7ap_: 2j7a P: [165937]
        automated match to d1oaha_
        complexed with act, ca, hem, lmt
      12. 1506387Domain d2j7aq_: 2j7a Q: [165938]
        automated match to d1oaha_
        complexed with act, ca, hem, lmt
    2. Domains for 2vr0:
      1. 1506388Domain d2vr0a_: 2vr0 A: [206418]
        automated match to d2j7ah_
        complexed with ca, hem, hqo
      2. 1506389Domain d2vr0b_: 2vr0 B: [206419]
        automated match to d2j7ah_
        complexed with ca, hem, hqo
      3. 1506390Domain d2vr0d_: 2vr0 D: [206420]
        automated match to d2j7ah_
        complexed with ca, hem, hqo
      4. 1506391Domain d2vr0e_: 2vr0 E: [206421]
        automated match to d2j7ah_
        complexed with ca, hem, hqo
  2. 1506392Escherichia coli K-12 [TaxId:83333] [189512] (1 PDB entry)
  3. 1506397Escherichia coli [TaxId:562] [187218] (2 PDB entries)
    1. Domains for 2rdz:
      1. 1506398Domain d2rdza_: 2rdz A: [151967]
        automated match to d1gu6a_
        complexed with ca, edo, hec, so4
      2. 1506399Domain d2rdzb_: 2rdz B: [151968]
        automated match to d1gu6a_
        complexed with ca, edo, hec, so4
      3. 1506400Domain d2rdzc_: 2rdz C: [151969]
        automated match to d1gu6a_
        complexed with ca, edo, hec, so4
      4. 1506401Domain d2rdzd_: 2rdz D: [151970]
        automated match to d1gu6a_
        complexed with ca, edo, hec, so4
    2. Domains for 3tor:
      1. 1506402Domain d3tora_: 3tor A: [185897]
        automated match to d1gu6a_
        complexed with ca, eu, hec
      2. 1506403Domain d3torb_: 3tor B: [185898]
        automated match to d1gu6a_
        complexed with ca, eu, hec
      3. 1506404Domain d3torc_: 3tor C: [185899]
        automated match to d1gu6a_
        complexed with ca, eu, hec
      4. 1506405Domain d3tord_: 3tor D: [185900]
        automated match to d1gu6a_
        complexed with ca, eu, hec
  4. 1506406Nitrosomonas europaea [TaxId:228410] [256253] (1 PDB entry)
  5. 1506410Nitrosomonas europaea [TaxId:915] [256367] (2 PDB entries)
    1. Domains for 4n4n:
      1. 1506411Domain d4n4na_: 4n4n A: [253875]
        automated match to d1fgja_
        complexed with hec, hem, k, po4
      2. 1506412Domain d4n4nc_: 4n4n C: [253876]
        automated match to d1fgja_
        complexed with hec, hem, k, po4
      3. 1506413Domain d4n4ne_: 4n4n E: [253877]
        automated match to d1fgja_
        complexed with hec, hem, k, po4
    2. Domains for 4n4o:
      1. 1506414Domain d4n4oa_: 4n4o A: [253878]
        automated match to d1fgja_
        complexed with 12p, hec, hem, hoa, k, po4
      2. 1506415Domain d4n4oc_: 4n4o C: [253879]
        automated match to d1fgja_
        complexed with 12p, hec, hem, hoa, k, po4
      3. 1506416Domain d4n4oe_: 4n4o E: [253880]
        automated match to d1fgja_
        complexed with 12p, hec, hem, hoa, k, po4
  6. 1506417Shewanella frigidimarina [TaxId:318167] [255317] (1 PDB entry)
  7. 1506419Shewanella oneidensis [TaxId:70863] [195500] (1 PDB entry)
  8. 1506422Wolinella succinogenes [TaxId:273121] [187068] (2 PDB entries)
    1. Domain for 2e80:
    2. Domain for 2e81:
  9. 1506425Wolinella succinogenes [TaxId:844] [187217] (4 PDB entries)
    1. Domain for 3bnf:
    2. Domain for 3bng:
    3. Domain for 3bnh:
    4. Domain for 3bnj:

More info for Protein automated matches from a.138.1.3: Di-heme elbow motif

Timeline for Protein automated matches from a.138.1.3: Di-heme elbow motif: