SCOPe 2.08: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.08
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
Fold c.26: Adenine nucleotide alpha hydrolase-like [52373] (3 superfamilies)
core: 3 layers, a/b/a ; parallel beta-sheet of 5 strands, order 32145

Superfamily c.26.2: Adenine nucleotide alpha hydrolases-like [52402] (7 families)

(S)

share similar mode of ligand (Adenosine group) binding
can be subdivided into two group with closer relationships within each group than between the groups; the first three families form one group whereas the last two families form the other group

Family c.26.2.1: N-type ATP pyrophosphatases [52403] (9 proteins)
Protein automated matches [190257] (5 species)
not a true protein

Species:

Helicobacter pylori [TaxId:210] [188123] (2 PDB entries)
1. Domain for 1xng:
  - Domain d1xngb2: 1xng B:3-260 [122187]
    Other proteins in same PDB: d1xnga1, d1xngb3
    automated match to d1xnga1
    complexed with atp, dnd, mg
2. Domain for 1xnh:
  - Domain d1xnha_: 1xnh A: [122188]
    automated match to d1xnga1
Pyrococcus horikoshii [TaxId:53953] [187044] (1 PDB entry)
- Domains for 2d13:
  1. Domain d2d13b_: 2d13 B: [131122]
    Other proteins in same PDB: d2d13a1
    automated match to d1ru8a_
  2. Domain d2d13c_: 2d13 C: [131123]
    Other proteins in same PDB: d2d13a1
    automated match to d1ru8a_
  3. Domain d2d13d_: 2d13 D: [131124]
    Other proteins in same PDB: d2d13a1
    automated match to d1ru8a_
Salmonella typhimurium [TaxId:90371] [188917] (1 PDB entry)
- Domain for 3hmq:
  - Domain d3hmqa_: 3hmq A: [177699]
    automated match to d1wxea1
    complexed with nad, so4
Staphylococcus aureus [TaxId:93062] [390589] (1 PDB entry)
- Domains for 6kv3:
  1. Domain d6kv3a_: 6kv3 A: [390691]
    automated match to d1wxea1
  2. Domain d6kv3b_: 6kv3 B: [390591]
    automated match to d1wxea1
  3. Domain d6kv3c_: 6kv3 C: [390590]
    automated match to d1wxea1
  4. Domain d6kv3d_: 6kv3 D: [390605]
    automated match to d1wxea1
Streptococcus pyogenes [TaxId:471876] [328854] (2 PDB entries)
1. Domains for 5huh:
  1. Domain d5huha_: 5huh A: [328890]
    automated match to d3hmqa_
    complexed with mg, so4
  2. Domain d5huhb_: 5huh B: [328876]
    automated match to d3hmqa_
    complexed with mg, so4
2. Domains for 5huj:
  1. Domain d5huja_: 5huj A: [328887]
    automated match to d3hmqa_
    complexed with cl
  2. Domain d5hujb_: 5huj B: [328855]
    automated match to d3hmqa_
    complexed with cl

More info for Protein automated matches from c.26.2.1: N-type ATP pyrophosphatases

Timeline for Protein automated matches from c.26.2.1: N-type ATP pyrophosphatases:

Protein automated matches from c.26.2.1: N-type ATP pyrophosphatases first appeared in SCOPe 2.01
Protein automated matches from c.26.2.1: N-type ATP pyrophosphatases appears in SCOPe 2.07