Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2581248Class g: Small proteins [56992] (98 folds)
  3. 2588606Fold g.44: RING/U-box [57849] (1 superfamily)
    dimetal(zinc)-bound alpha+beta motif; structurally diverse
  4. 2588607Superfamily g.44.1: RING/U-box [57850] (7 families) (S)
  5. 2588743Family g.44.1.0: automated matches [191345] (1 protein)
    not a true family
  6. 2588744Protein automated matches [190242] (3 species)
    not a true protein

Species:

  1. 2588745Fruit fly (Drosophila melanogaster) [TaxId:7227] [255464] (1 PDB entry)
  2. 2588747Human (Homo sapiens) [TaxId:9606] [189860] (11 PDB entries)
    1. Domain for 2ecl:
    2. Domain for 2lxh:
    3. Domain for 2lxp:
    4. Domains for 2y43:
      1. 2588748Domain d2y43a_: 2y43 A: [170589]
        automated match to d1jm7b_
        complexed with zn
      2. 2588749Domain d2y43b_: 2y43 B: [170590]
        automated match to d1jm7b_
        complexed with zn
    5. Domains for 3lrq:
      1. 2588751Domain d3lrqa1: 3lrq A:1-81 [199761]
        Other proteins in same PDB: d3lrqa2, d3lrqb2
        automated match to d3lrqd_
        complexed with zn
      2. 2588752Domain d3lrqb1: 3lrq B:1-79 [199762]
        Other proteins in same PDB: d3lrqa2, d3lrqb2
        automated match to d3lrqd_
        complexed with zn
      3. 2588753Domain d3lrqc_: 3lrq C: [199763]
        Other proteins in same PDB: d3lrqa2, d3lrqb2
        automated match to d3lrqd_
        complexed with zn
      4. 2588754Domain d3lrqd_: 3lrq D: [196465]
        Other proteins in same PDB: d3lrqa2, d3lrqb2
        automated match to d2y43b_
        complexed with zn
    6. Domain for 5d0i:
    7. Domain for 5lg0:
    8. Domain for 5lg7:
    9. Domains for 6icz:
      1. 3065822Domain d6iczq1: 6icz q:3-59 [365884]
        Other proteins in same PDB: d6icza_, d6iczb_, d6iczc1, d6iczc2, d6iczc3, d6iczc4, d6iczc5, d6iczd_, d6icze_, d6iczf_, d6iczg_, d6iczh_, d6iczi_, d6iczj_, d6iczk_, d6iczl_, d6iczm_, d6iczn_, d6iczo_, d6iczp_, d6iczq2, d6iczr2, d6iczs_, d6iczt_, d6iczu1, d6iczu2, d6iczv_, d6iczy_
        automated match to d3jb9s1
        complexed with atp, gtp, i6p, mg, zn
      2. 3065879Domain d6iczr1: 6icz r:3-59 [365941]
        Other proteins in same PDB: d6icza_, d6iczb_, d6iczc1, d6iczc2, d6iczc3, d6iczc4, d6iczc5, d6iczd_, d6icze_, d6iczf_, d6iczg_, d6iczh_, d6iczi_, d6iczj_, d6iczk_, d6iczl_, d6iczm_, d6iczn_, d6iczo_, d6iczp_, d6iczq2, d6iczr2, d6iczs_, d6iczt_, d6iczu1, d6iczu2, d6iczv_, d6iczy_
        automated match to d3jb9s1
        complexed with atp, gtp, i6p, mg, zn
    10. Domains for 6id0:
      1. 3065926Domain d6id0q1: 6id0 q:3-59 [365988]
        Other proteins in same PDB: d6id0a_, d6id0b_, d6id0c1, d6id0c2, d6id0c3, d6id0c4, d6id0c5, d6id0d_, d6id0e_, d6id0f_, d6id0g_, d6id0h_, d6id0i_, d6id0j_, d6id0k_, d6id0l_, d6id0m_, d6id0n_, d6id0o_, d6id0p_, d6id0q2, d6id0r2, d6id0s_, d6id0t_, d6id0y_
        automated match to d3jb9s1
        complexed with gtp, i6p, mg, zn
      2. 3065992Domain d6id0r1: 6id0 r:3-59 [366054]
        Other proteins in same PDB: d6id0a_, d6id0b_, d6id0c1, d6id0c2, d6id0c3, d6id0c4, d6id0c5, d6id0d_, d6id0e_, d6id0f_, d6id0g_, d6id0h_, d6id0i_, d6id0j_, d6id0k_, d6id0l_, d6id0m_, d6id0n_, d6id0o_, d6id0p_, d6id0q2, d6id0r2, d6id0s_, d6id0t_, d6id0y_
        automated match to d3jb9s1
        complexed with gtp, i6p, mg, zn
    11. Domains for 6id1:
      1. 3065953Domain d6id1q1: 6id1 q:3-59 [366015]
        Other proteins in same PDB: d6id1a_, d6id1b_, d6id1c1, d6id1c2, d6id1c3, d6id1c4, d6id1c5, d6id1d_, d6id1e_, d6id1f_, d6id1g_, d6id1h_, d6id1i_, d6id1j_, d6id1k_, d6id1l_, d6id1m_, d6id1n_, d6id1o_, d6id1p_, d6id1q2, d6id1r2, d6id1s_, d6id1t_, d6id1y_
        automated match to d3jb9s1
        complexed with gtp, i6p, mg, zn
      2. 3065982Domain d6id1r1: 6id1 r:3-59 [366044]
        Other proteins in same PDB: d6id1a_, d6id1b_, d6id1c1, d6id1c2, d6id1c3, d6id1c4, d6id1c5, d6id1d_, d6id1e_, d6id1f_, d6id1g_, d6id1h_, d6id1i_, d6id1j_, d6id1k_, d6id1l_, d6id1m_, d6id1n_, d6id1o_, d6id1p_, d6id1q2, d6id1r2, d6id1s_, d6id1t_, d6id1y_
        automated match to d3jb9s1
        complexed with gtp, i6p, mg, zn
  3. 2588758Mouse (Mus musculus) [TaxId:10090] [187013] (2 PDB entries)
    1. Domains for 2c2v:
      1. 2588759Domain d2c2vt_: 2c2v T: [129695]
        Other proteins in same PDB: d2c2vb_, d2c2vc1, d2c2ve_, d2c2vf_, d2c2vh_, d2c2vi_, d2c2vk_, d2c2vl_, d2c2vs1
        automated match to d1t1ha_
      2. 2588760Domain d2c2vu_: 2c2v U: [129696]
        Other proteins in same PDB: d2c2vb_, d2c2vc1, d2c2ve_, d2c2vf_, d2c2vh_, d2c2vi_, d2c2vk_, d2c2vl_, d2c2vs1
        automated match to d1t1ha_
      3. 2588761Domain d2c2vv_: 2c2v V: [129697]
        Other proteins in same PDB: d2c2vb_, d2c2vc1, d2c2ve_, d2c2vf_, d2c2vh_, d2c2vi_, d2c2vk_, d2c2vl_, d2c2vs1
        automated match to d1t1ha_
    2. Domain for 2ect:

More info for Protein automated matches from g.44.1.0: automated matches

Timeline for Protein automated matches from g.44.1.0: automated matches: