Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. 3029608Class g: Small proteins [56992] (100 folds)
  3. 3037528Fold g.44: RING/U-box [57849] (1 superfamily)
    dimetal(zinc)-bound alpha+beta motif; structurally diverse
  4. 3037529Superfamily g.44.1: RING/U-box [57850] (7 families) (S)
  5. 3037682Family g.44.1.0: automated matches [191345] (1 protein)
    not a true family
  6. 3037683Protein automated matches [190242] (4 species)
    not a true protein

Species:

  1. 3037684Fruit fly (Drosophila melanogaster) [TaxId:7227] [255464] (1 PDB entry)
  2. 3037686Glycine soja [TaxId:3848] [401792] (1 PDB entry)
  3. 3037688Human (Homo sapiens) [TaxId:9606] [189860] (17 PDB entries)
    1. Domain for 2ecl:
    2. Domain for 2kiz:
    3. Domain for 2lxh:
    4. Domain for 2lxp:
    5. Domains for 2y43:
      1. 3037689Domain d2y43a_: 2y43 A: [170589]
        automated match to d1jm7b_
        complexed with zn
      2. 3037690Domain d2y43b_: 2y43 B: [170590]
        automated match to d1jm7b_
        complexed with zn
    6. Domain for 3l1x:
    7. Domain for 3l1z:
    8. Domains for 3lrq:
      1. 3037695Domain d3lrqa1: 3lrq A:1-81 [199761]
        Other proteins in same PDB: d3lrqa2, d3lrqb2
        automated match to d3lrqd_
        complexed with zn
      2. 3037696Domain d3lrqb1: 3lrq B:1-79 [199762]
        Other proteins in same PDB: d3lrqa2, d3lrqb2
        automated match to d3lrqd_
        complexed with zn
      3. 3037697Domain d3lrqc_: 3lrq C: [199763]
        Other proteins in same PDB: d3lrqa2, d3lrqb2
        automated match to d3lrqd_
        complexed with zn
      4. 3037698Domain d3lrqd_: 3lrq D: [196465]
        Other proteins in same PDB: d3lrqa2, d3lrqb2
        automated match to d2y43b_
        complexed with zn
    9. Domain for 5d0i:
    10. Domain for 5lg0:
    11. Domain for 5lg7:
    12. Domain for 5o75:
    13. Domain for 5ulh:
    14. Domain for 5ulk:
    15. Domains for 6icz:
      1. 3037705Domain d6iczq1: 6icz q:3-59 [365884]
        Other proteins in same PDB: d6icza_, d6iczb_, d6iczc1, d6iczc2, d6iczc3, d6iczc4, d6iczc5, d6iczd_, d6icze_, d6iczf_, d6iczg_, d6iczh_, d6iczi_, d6iczj_, d6iczk_, d6iczl_, d6iczm_, d6iczn_, d6iczo_, d6iczp_, d6iczq2, d6iczr2, d6iczs_, d6iczt_, d6iczu1, d6iczu2, d6iczv_, d6iczy_
        automated match to d3jb9s1
        complexed with atp, gtp, ihp, mg, zn
      2. 3037706Domain d6iczr1: 6icz r:3-59 [365941]
        Other proteins in same PDB: d6icza_, d6iczb_, d6iczc1, d6iczc2, d6iczc3, d6iczc4, d6iczc5, d6iczd_, d6icze_, d6iczf_, d6iczg_, d6iczh_, d6iczi_, d6iczj_, d6iczk_, d6iczl_, d6iczm_, d6iczn_, d6iczo_, d6iczp_, d6iczq2, d6iczr2, d6iczs_, d6iczt_, d6iczu1, d6iczu2, d6iczv_, d6iczy_
        automated match to d3jb9s1
        complexed with atp, gtp, ihp, mg, zn
    16. Domains for 6id0:
      1. 3037703Domain d6id0q1: 6id0 q:3-59 [365988]
        Other proteins in same PDB: d6id0a_, d6id0b_, d6id0c1, d6id0c2, d6id0c3, d6id0c4, d6id0c5, d6id0d_, d6id0e_, d6id0f_, d6id0g_, d6id0h_, d6id0i_, d6id0j_, d6id0k_, d6id0l_, d6id0m_, d6id0n_, d6id0o_, d6id0p_, d6id0q2, d6id0r2, d6id0s_, d6id0t_, d6id0y_
        automated match to d3jb9s1
        complexed with gtp, ihp, mg, zn
      2. 3037704Domain d6id0r1: 6id0 r:3-59 [366054]
        Other proteins in same PDB: d6id0a_, d6id0b_, d6id0c1, d6id0c2, d6id0c3, d6id0c4, d6id0c5, d6id0d_, d6id0e_, d6id0f_, d6id0g_, d6id0h_, d6id0i_, d6id0j_, d6id0k_, d6id0l_, d6id0m_, d6id0n_, d6id0o_, d6id0p_, d6id0q2, d6id0r2, d6id0s_, d6id0t_, d6id0y_
        automated match to d3jb9s1
        complexed with gtp, ihp, mg, zn
    17. Domains for 6id1:
      1. 3037701Domain d6id1q1: 6id1 q:3-59 [366015]
        Other proteins in same PDB: d6id1a_, d6id1b_, d6id1c1, d6id1c2, d6id1c3, d6id1c4, d6id1c5, d6id1d_, d6id1e_, d6id1f_, d6id1g_, d6id1h_, d6id1i_, d6id1j_, d6id1k_, d6id1l_, d6id1m_, d6id1n_, d6id1o_, d6id1p_, d6id1q2, d6id1r2, d6id1s_, d6id1t_, d6id1y_
        automated match to d3jb9s1
        complexed with gtp, ihp, mg, zn
      2. 3037702Domain d6id1r1: 6id1 r:3-59 [366044]
        Other proteins in same PDB: d6id1a_, d6id1b_, d6id1c1, d6id1c2, d6id1c3, d6id1c4, d6id1c5, d6id1d_, d6id1e_, d6id1f_, d6id1g_, d6id1h_, d6id1i_, d6id1j_, d6id1k_, d6id1l_, d6id1m_, d6id1n_, d6id1o_, d6id1p_, d6id1q2, d6id1r2, d6id1s_, d6id1t_, d6id1y_
        automated match to d3jb9s1
        complexed with gtp, ihp, mg, zn
  4. 3037713Mouse (Mus musculus) [TaxId:10090] [187013] (2 PDB entries)
    1. Domains for 2c2v:
      1. 3037714Domain d2c2vt_: 2c2v T: [129695]
        Other proteins in same PDB: d2c2vb2, d2c2vb3, d2c2vc1, d2c2ve_, d2c2vf_, d2c2vh_, d2c2vi_, d2c2vk2, d2c2vk3, d2c2vl_, d2c2vs1
        automated match to d1t1ha_
      2. 3037715Domain d2c2vu_: 2c2v U: [129696]
        Other proteins in same PDB: d2c2vb2, d2c2vb3, d2c2vc1, d2c2ve_, d2c2vf_, d2c2vh_, d2c2vi_, d2c2vk2, d2c2vk3, d2c2vl_, d2c2vs1
        automated match to d1t1ha_
      3. 3037716Domain d2c2vv_: 2c2v V: [129697]
        Other proteins in same PDB: d2c2vb2, d2c2vb3, d2c2vc1, d2c2ve_, d2c2vf_, d2c2vh_, d2c2vi_, d2c2vk2, d2c2vk3, d2c2vl_, d2c2vs1
        automated match to d1t1ha_
    2. Domain for 2ect:

More info for Protein automated matches from g.44.1.0: automated matches

Timeline for Protein automated matches from g.44.1.0: automated matches: