Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2166686Fold d.32: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase [54592] (1 superfamily)
    beta-alpha-beta(3); 2 layers: alpha/beta
  4. 2166687Superfamily d.32.1: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase [54593] (11 families) (S)
  5. 2167144Family d.32.1.0: automated matches [191344] (1 protein)
    not a true family
  6. 2167145Protein automated matches [190239] (20 species)
    not a true protein

Species:

  1. 2167146Anthrax bacillus (Bacillus anthracis) [TaxId:1392] [280024] (1 PDB entry)
  2. 2167148Bacillus anthracis [TaxId:198094] [226573] (4 PDB entries)
    1. Domains for 3uh9:
      1. 2167151Domain d3uh9a1: 3uh9 A:2-139 [306657]
        Other proteins in same PDB: d3uh9a2
        automated match to d4jd1b_
        complexed with edo, fcn, zn
      2. 2167152Domain d3uh9b_: 3uh9 B: [306659]
        Other proteins in same PDB: d3uh9a2
        automated match to d4jd1b_
        complexed with edo, fcn, zn
    2. Domains for 4ir0:
      1. 2167149Domain d4ir0a1: 4ir0 A:1-139 [223326]
        Other proteins in same PDB: d4ir0a2, d4ir0a3
        automated match to d1npbc_
        complexed with edo, fcn, zn
      2. 2167150Domain d4ir0b_: 4ir0 B: [223327]
        Other proteins in same PDB: d4ir0a2, d4ir0a3
        automated match to d1npbc_
        complexed with edo, fcn, zn
    3. Domains for 4jd1:
      1. 2167153Domain d4jd1a1: 4jd1 A:1-139 [223743]
        Other proteins in same PDB: d4jd1a2, d4jd1b2, d4jd1b3
        automated match to d1npbc_
        complexed with fcn, pge, zn
      2. 2167154Domain d4jd1b1: 4jd1 B:1-139 [223744]
        Other proteins in same PDB: d4jd1a2, d4jd1b2, d4jd1b3
        automated match to d1npbc_
        complexed with fcn, pge, zn
    4. Domain for 5f6q:
  3. 2167156Bacillus cereus [TaxId:222523] [228045] (9 PDB entries)
    1. Domains for 4jh1:
      1. 2167165Domain d4jh1a_: 4jh1 A: [234990]
        automated match to d4jh2a_
        complexed with gol, mg, so4, zn
      2. 2167166Domain d4jh1b_: 4jh1 B: [234991]
        automated match to d4jh2a_
        complexed with gol, mg, so4, zn
    2. Domains for 4jh2:
      1. 2167157Domain d4jh2a_: 4jh2 A: [228047]
        automated match to d4jd1b_
        complexed with fmt, mg, so4, zn
      2. 2167158Domain d4jh2b_: 4jh2 B: [228048]
        automated match to d4jd1b_
        complexed with fmt, mg, so4, zn
    3. Domains for 4jh3:
      1. 2167163Domain d4jh3a_: 4jh3 A: [234992]
        automated match to d4jh2a_
        complexed with fcn, fmt, gol, mg, zn
      2. 2167164Domain d4jh3b_: 4jh3 B: [234993]
        automated match to d4jh2a_
        complexed with fcn, fmt, gol, mg, zn
    4. Domains for 4jh4:
      1. 2167173Domain d4jh4a_: 4jh4 A: [234994]
        automated match to d4jh2a_
        complexed with fcn, ni
      2. 2167174Domain d4jh4b_: 4jh4 B: [234995]
        automated match to d4jh2a_
        complexed with fcn, ni
    5. Domains for 4jh5:
      1. 2167169Domain d4jh5a_: 4jh5 A: [234996]
        automated match to d4jh2a_
        complexed with co, fcn, mg
      2. 2167170Domain d4jh5b_: 4jh5 B: [234999]
        automated match to d4jh2a_
        complexed with co, fcn, mg
    6. Domains for 4jh6:
      1. 2167159Domain d4jh6a_: 4jh6 A: [234997]
        automated match to d4jh2a_
        complexed with fcn, gol, mg, mn
      2. 2167160Domain d4jh6b_: 4jh6 B: [235000]
        automated match to d4jh2a_
        complexed with fcn, gol, mg, mn
    7. Domains for 4jh7:
      1. 2167167Domain d4jh7a_: 4jh7 A: [234998]
        automated match to d4jh2a_
        complexed with 1km, fmt, mg, mn
      2. 2167168Domain d4jh7b_: 4jh7 B: [235001]
        automated match to d4jh2a_
        complexed with 1km, fmt, mg, mn
    8. Domains for 4jh8:
      1. 2167161Domain d4jh8a_: 4jh8 A: [235002]
        automated match to d4jh2a_
        complexed with cys, fcn, gol, mg, zn
      2. 2167162Domain d4jh8b_: 4jh8 B: [235003]
        automated match to d4jh2a_
        complexed with cys, fcn, gol, mg, zn
    9. Domains for 4jh9:
      1. 2167171Domain d4jh9a_: 4jh9 A: [235004]
        automated match to d4jh2a_
        complexed with 1km, mn
      2. 2167172Domain d4jh9b_: 4jh9 B: [235005]
        automated match to d4jh2a_
        complexed with 1km, mn
  4. 2167175Bacillus cereus [TaxId:226900] [189456] (1 PDB entry)
  5. 2167177Bacillus halodurans [TaxId:272558] [225948] (1 PDB entry)
  6. 2167179Clostridium acetobutylicum [TaxId:1488] [193388] (2 PDB entries)
    1. Domain for 2qh0:
    2. Domain for 3hdp:
  7. 2167182Human (Homo sapiens) [TaxId:9606] [189952] (1 PDB entry)
  8. 2167187Leishmania major [TaxId:5664] [187010] (1 PDB entry)
  9. 2167193Mycobacterium tuberculosis [TaxId:1773] [231709] (2 PDB entries)
    1. Domains for 2zi8:
      1. 2167198Domain d2zi8a1: 2zi8 A:1-132 [231710]
        automated match to d2wl3b1
        complexed with fe2, sdt
      2. 2167199Domain d2zi8a2: 2zi8 A:133-299 [231711]
        automated match to d2wl3b2
        complexed with fe2, sdt
      3. 2167200Domain d2zi8b1: 2zi8 B:1-132 [231712]
        automated match to d2wl3b1
        complexed with fe2, sdt
      4. 2167201Domain d2zi8b2: 2zi8 B:133-298 [231713]
        automated match to d2wl3b2
        complexed with fe2, sdt
    2. Domains for 2zyq:
      1. 2167194Domain d2zyqa1: 2zyq A:2-132 [245048]
        automated match to d2zi8a1
        complexed with fe2, tar
      2. 2167195Domain d2zyqa2: 2zyq A:133-297 [245049]
        automated match to d2zi8a2
        complexed with fe2, tar
      3. 2167196Domain d2zyqb1: 2zyq B:2-132 [245050]
        automated match to d2zi8a1
        complexed with fe2, tar
      4. 2167197Domain d2zyqb2: 2zyq B:133-297 [245051]
        automated match to d2zi8a2
        complexed with fe2, tar
  10. 2167202Pseudomonas aeruginosa, PA01 [TaxId:208964] [259805] (4 PDB entries)
    1. Domains for 4mtq:
      1. 2167209Domain d4mtqa_: 4mtq A: [266773]
        automated match to d4mtsa_
        complexed with ni, sin
      2. 2167210Domain d4mtqb_: 4mtq B: [266774]
        automated match to d4mtsa_
        complexed with ni, sin
    2. Domains for 4mtr:
      1. 2167205Domain d4mtra_: 4mtr A: [266775]
        automated match to d4mtsa_
        complexed with edo, zn
      2. 2167206Domain d4mtrb_: 4mtr B: [266776]
        automated match to d4mtsa_
        complexed with edo, zn
    3. Domains for 4mts:
      1. 2167203Domain d4mtsa_: 4mts A: [259806]
        automated match to d1f9za_
        complexed with gol, ni, zn
      2. 2167204Domain d4mtsb_: 4mts B: [263055]
        automated match to d4mtsa_
        complexed with gol, ni, zn
    4. Domains for 4mtt:
      1. 2167207Domain d4mtta_: 4mtt A: [266777]
        automated match to d4mtsa_
        complexed with cl, gol, ni, tam, zn
      2. 2167208Domain d4mttb_: 4mtt B: [266778]
        automated match to d4mtsa_
        complexed with cl, gol, ni, tam, zn
  11. 2167211Pseudomonas sp. [TaxId:237609] [225772] (3 PDB entries)
    1. Domains for 3hpv:
      1. 2167228Domain d3hpva1: 3hpv A:2-146 [211186]
        automated match to d1mpya1
        complexed with fe2
      2. 2167229Domain d3hpva2: 3hpv A:147-298 [211187]
        automated match to d1mpya2
        complexed with fe2
      3. 2167230Domain d3hpvb1: 3hpv B:2-146 [211188]
        automated match to d1mpya1
        complexed with fe2
      4. 2167231Domain d3hpvb2: 3hpv B:147-289 [211189]
        automated match to d1mpya2
        complexed with fe2
      5. 2167232Domain d3hpvc1: 3hpv C:2-146 [211190]
        automated match to d1mpya1
        complexed with fe2
      6. 2167233Domain d3hpvc2: 3hpv C:147-289 [211191]
        automated match to d1mpya2
        complexed with fe2
      7. 2167234Domain d3hpvd1: 3hpv D:2-146 [211192]
        automated match to d1mpya1
        complexed with fe2
      8. 2167235Domain d3hpvd2: 3hpv D:147-289 [211193]
        automated match to d1mpya2
        complexed with fe2
    2. Domains for 3hpy:
      1. 2167220Domain d3hpya1: 3hpy A:2-146 [211194]
        automated match to d1mpya1
        complexed with fe, mct
      2. 2167221Domain d3hpya2: 3hpy A:147-289 [211195]
        automated match to d1mpya2
        complexed with fe, mct
      3. 2167222Domain d3hpyb1: 3hpy B:2-146 [211196]
        automated match to d1mpya1
        complexed with fe, mct
      4. 2167223Domain d3hpyb2: 3hpy B:147-289 [211197]
        automated match to d1mpya2
        complexed with fe, mct
      5. 2167224Domain d3hpyc1: 3hpy C:2-146 [211198]
        automated match to d1mpya1
        complexed with fe, mct
      6. 2167225Domain d3hpyc2: 3hpy C:147-297 [211199]
        automated match to d1mpya2
        complexed with fe, mct
      7. 2167226Domain d3hpyd1: 3hpy D:2-146 [211200]
        automated match to d1mpya1
        complexed with fe, mct
      8. 2167227Domain d3hpyd2: 3hpy D:147-297 [211201]
        automated match to d1mpya2
        complexed with fe, mct
    3. Domains for 3hq0:
      1. 2167212Domain d3hq0a1: 3hq0 A:2-146 [211202]
        automated match to d1mpya1
        complexed with fe, m3p
      2. 2167213Domain d3hq0a2: 3hq0 A:147-298 [211203]
        automated match to d1mpya2
        complexed with fe, m3p
      3. 2167214Domain d3hq0b1: 3hq0 B:2-146 [211204]
        automated match to d1mpya1
        complexed with fe, m3p
      4. 2167215Domain d3hq0b2: 3hq0 B:147-289 [211205]
        automated match to d1mpya2
        complexed with fe, m3p
      5. 2167216Domain d3hq0c1: 3hq0 C:2-146 [211206]
        automated match to d1mpya1
        complexed with fe, m3p
      6. 2167217Domain d3hq0c2: 3hq0 C:147-297 [211207]
        automated match to d1mpya2
        complexed with fe, m3p
      7. 2167218Domain d3hq0d1: 3hq0 D:2-146 [211208]
        automated match to d1mpya1
        complexed with fe, m3p
      8. 2167219Domain d3hq0d2: 3hq0 D:147-289 [211209]
        automated match to d1mpya2
        complexed with fe, m3p
  12. 2167236Pseudomonas sp. [TaxId:69011] [230718] (5 PDB entries)
    1. Domains for 2ehz:
      1. 2167237Domain d2ehza1: 2ehz A:4-137 [241759]
        automated match to d2ei0a1
        complexed with edo, fe2, mct, mg
      2. 2167238Domain d2ehza2: 2ehz A:138-302 [241760]
        automated match to d2ei0a2
        complexed with edo, fe2, mct, mg
    2. Domains for 2ei0:
      1. 2167241Domain d2ei0a1: 2ei0 A:5-137 [230719]
        automated match to d2wl3b1
        complexed with bp7, fe2, gol, mg
      2. 2167242Domain d2ei0a2: 2ei0 A:138-295 [230720]
        automated match to d2wl3b2
        complexed with bp7, fe2, gol, mg
    3. Domains for 2ei1:
      1. 2167239Domain d2ei1a1: 2ei1 A:5-137 [241761]
        automated match to d2ei0a1
        complexed with d1n, fe2, gol, mg
      2. 2167240Domain d2ei1a2: 2ei1 A:138-302 [241762]
        automated match to d2ei0a2
        complexed with d1n, fe2, gol, mg
    4. Domains for 2ei2:
      1. 2167243Domain d2ei2a1: 2ei2 A:4-137 [241763]
        automated match to d2ei0a1
        complexed with fe2, gol, mg
      2. 2167244Domain d2ei2a2: 2ei2 A:138-302 [241764]
        automated match to d2ei0a2
        complexed with fe2, gol, mg
    5. Domains for 2ei3:
      1. 2167245Domain d2ei3a1: 2ei3 A:5-137 [241765]
        automated match to d2ei0a1
        complexed with bpy, fe2, gol, mg
      2. 2167246Domain d2ei3a2: 2ei3 A:138-302 [241766]
        automated match to d2ei0a2
        complexed with bpy, fe2, gol, mg
  13. 2167247Rhodococcus sp. [TaxId:186196] [225962] (2 PDB entries)
    1. Domains for 2wl3:
      1. 2167256Domain d2wl3a1: 2wl3 A:2-134 [206875]
        automated match to d1lkda1
        complexed with ca, fe, gol
      2. 2167257Domain d2wl3a2: 2wl3 A:135-288 [206876]
        automated match to d1hana2
        complexed with ca, fe, gol
      3. 2167258Domain d2wl3b1: 2wl3 B:1-134 [206877]
        automated match to d1lkda1
        complexed with ca, fe, gol
      4. 2167259Domain d2wl3b2: 2wl3 B:135-287 [206878]
        automated match to d1hana2
        complexed with ca, fe, gol
      5. 2167260Domain d2wl3c1: 2wl3 C:2-134 [206879]
        automated match to d1lkda1
        complexed with ca, fe, gol
      6. 2167261Domain d2wl3c2: 2wl3 C:135-285 [206880]
        automated match to d1hana2
        complexed with ca, fe, gol
      7. 2167262Domain d2wl3d1: 2wl3 D:2-134 [206881]
        automated match to d1lkda1
        complexed with ca, fe, gol
      8. 2167263Domain d2wl3d2: 2wl3 D:135-286 [206882]
        automated match to d1hana2
        complexed with ca, fe, gol
    2. Domains for 2wl9:
      1. 2167248Domain d2wl9a1: 2wl9 A:1-134 [231437]
        automated match to d2wl3a1
        complexed with fe, gol, mbd, mg
      2. 2167249Domain d2wl9a2: 2wl9 A:135-300 [231438]
        automated match to d2wl3a2
        complexed with fe, gol, mbd, mg
      3. 2167250Domain d2wl9b1: 2wl9 B:2-134 [231435]
        automated match to d2wl3a1
        complexed with fe, gol, mbd, mg
      4. 2167251Domain d2wl9b2: 2wl9 B:135-299 [231436]
        automated match to d2wl3a2
        complexed with fe, gol, mbd, mg
      5. 2167252Domain d2wl9c1: 2wl9 C:1-134 [231439]
        automated match to d2wl3a1
        complexed with fe, gol, mbd, mg
      6. 2167253Domain d2wl9c2: 2wl9 C:135-299 [231440]
        automated match to d2wl3a2
        complexed with fe, gol, mbd, mg
      7. 2167254Domain d2wl9d1: 2wl9 D:2-134 [231441]
        automated match to d2wl3a1
        complexed with fe, gol, mbd, mg
      8. 2167255Domain d2wl9d2: 2wl9 D:135-300 [231442]
        automated match to d2wl3a2
        complexed with fe, gol, mbd, mg
  14. 2167264Staphylococcus aureus [TaxId:158879] [237200] (5 PDB entries)
    1. Domain for 4nay:
    2. Domain for 4naz:
    3. Domains for 4nb0:
      1. 2167267Domain d4nb0a1: 4nb0 A:2-138 [266905]
        Other proteins in same PDB: d4nb0a2, d4nb0b2
        automated match to d4nb1a_
        complexed with cys, gol, so4
      2. 2167268Domain d4nb0b1: 4nb0 B:2-138 [266906]
        Other proteins in same PDB: d4nb0a2, d4nb0b2
        automated match to d4nb1a_
        complexed with cys, gol, so4
    4. Domains for 4nb1:
      1. 2167269Domain d4nb1a1: 4nb1 A:1-139 [237203]
        Other proteins in same PDB: d4nb1a2, d4nb1b2
        automated match to d4jh2a_
        complexed with cys, so4
      2. 2167270Domain d4nb1b1: 4nb1 B:1-138 [237202]
        Other proteins in same PDB: d4nb1a2, d4nb1b2
        automated match to d4jh2a_
        complexed with cys, so4
    5. Domains for 4nb2:
      1. 2167271Domain d4nb2a1: 4nb2 A:1-138 [266907]
        Other proteins in same PDB: d4nb2a2, d4nb2b2
        automated match to d4nb1a_
        complexed with so4
      2. 2167272Domain d4nb2b1: 4nb2 B:1-138 [266908]
        Other proteins in same PDB: d4nb2a2, d4nb2b2
        automated match to d4nb1a_
        complexed with so4
  15. 2167273Staphylococcus aureus [TaxId:367830] [255916] (1 PDB entry)
  16. 2167276Thale cress (Arabidopsis thaliana) [TaxId:3702] [276308] (1 PDB entry)
  17. 2167281Uncultured bacterium [TaxId:77133] [188712] (1 PDB entry)
  18. 2167284Vibrio splendidus [TaxId:314291] [194747] (1 PDB entry)
  19. 2295396Klebsiella pneumoniae [TaxId:573] [338697] (2 PDB entries)
    1. Domains for 5v3d:
      1. 2295397Domain d5v3db_: 5v3d B: [338698]
        automated match to d4jh2a_
        complexed with edo, fcn, k, mn, peg
      2. 2295400Domain d5v3da_: 5v3d A: [338701]
        automated match to d4jh2a_
        complexed with edo, fcn, k, mn, peg
    2. Domains for 5v91:
      1. 2295425Domain d5v91a_: 5v91 A: [338726]
        automated match to d4jh2a_
        complexed with zn
      2. 2295569Domain d5v91b_: 5v91 B: [338870]
        automated match to d4jh2a_
        complexed with zn
  20. 2295422Escherichia coli [TaxId:562] [338723] (1 PDB entry)

More info for Protein automated matches from d.32.1.0: automated matches

Timeline for Protein automated matches from d.32.1.0: automated matches: