Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. 3021034Class f: Membrane and cell surface proteins and peptides [56835] (69 folds)
  3. 3021035Fold f.1: Toxins' membrane translocation domains [56836] (5 superfamilies)
    multi-helical domains of various folds which is thought to unfold in the membrane
  4. 3021129Superfamily f.1.4: Bcl-2 inhibitors of programmed cell death [56854] (2 families) (S)
    PROVISIONAL CLASSIFICATION, based on structural similarity to the diphtheria toxin domain
  5. 3021130Family f.1.4.1: Bcl-2 inhibitors of programmed cell death [56855] (11 proteins)
    Pfam PF00452
  6. 3021485Protein automated matches [190236] (3 species)
    not a true protein

Species:

  1. 3021486Human (Homo sapiens) [TaxId:9606] [188722] (26 PDB entries)
    1. Domain for 2kbw:
    2. Domain for 2m03:
    3. Domains for 2w3l:
      1. 3021516Domain d2w3la_: 2w3l A: [169043]
        automated match to d1gjha_
        complexed with dro
      2. 3021517Domain d2w3lb_: 2w3l B: [169044]
        automated match to d1gjha_
        complexed with dro
    4. Domains for 2y6w:
      1. 3021491Domain d2y6wa_: 2y6w A: [207489]
        automated match to d1zy3a1
        complexed with peg, pge
      2. 3021492Domain d2y6wb_: 2y6w B: [207490]
        automated match to d1zy3a1
        complexed with peg, pge
    5. Domains for 2yj1:
      1. 3021518Domain d2yj1a1: 2yj1 A:1-202 [170824]
        Other proteins in same PDB: d2yj1a2, d2yj1c2
        automated match to d1g5ja_
      2. 3021519Domain d2yj1c1: 2yj1 C:83-196 [170825]
        Other proteins in same PDB: d2yj1a2, d2yj1c2
        automated match to d1g5ja_
    6. Domain for 3fdl:
    7. Domains for 3fdm:
      1. 3021520Domain d3fdma1: 3fdm A:1-198 [175711]
        Other proteins in same PDB: d3fdma2, d3fdmb2
        automated match to d1g5ja_
        complexed with edo
      2. 3021521Domain d3fdmb1: 3fdm B:1-197 [175712]
        Other proteins in same PDB: d3fdma2, d3fdmb2
        automated match to d1g5ja_
        complexed with edo
      3. 3021522Domain d3fdmc_: 3fdm C: [175713]
        Other proteins in same PDB: d3fdma2, d3fdmb2
        automated match to d1g5ja_
        complexed with edo
    8. Domains for 3inq:
      1. 3021507Domain d3inqa_: 3inq A: [178463]
        automated match to d1g5ja_
        complexed with cl, edo, x0j
      2. 3021508Domain d3inqb_: 3inq B: [178464]
        automated match to d1g5ja_
        complexed with cl, edo, x0j
    9. Domain for 3kj0:
    10. Domain for 3kj1:
    11. Domain for 3kj2:
    12. Domains for 3kz0:
      1. 3021524Domain d3kz0a_: 3kz0 A: [179819]
        automated match to d1wsxa_
        complexed with so4, zn
      2. 3021525Domain d3kz0b_: 3kz0 B: [179820]
        automated match to d1wsxa_
        complexed with so4, zn
    13. Domain for 3mk8:
    14. Domains for 3r85:
      1. 3021503Domain d3r85a_: 3r85 A: [184840]
        automated match to d1g5ja_
        complexed with so4
      2. 3021504Domain d3r85b_: 3r85 B: [184841]
        automated match to d1g5ja_
        complexed with so4
      3. 3021505Domain d3r85c_: 3r85 C: [184842]
        automated match to d1g5ja_
        complexed with so4
      4. 3021506Domain d3r85d_: 3r85 D: [184843]
        automated match to d1g5ja_
        complexed with so4
    15. Domains for 3zk6:
      1. 3021511Domain d3zk6a1: 3zk6 A:27-197 [197062]
        Other proteins in same PDB: d3zk6a2, d3zk6b2
        automated match to d1g5ja_
        complexed with h1i
      2. 3021512Domain d3zk6b1: 3zk6 B:27-197 [197286]
        Other proteins in same PDB: d3zk6a2, d3zk6b2
        automated match to d1g5ja_
        complexed with h1i
    16. Domain for 3zln:
    17. Domain for 3zlo:
    18. Domains for 3zlr:
      1. 3021509Domain d3zlra1: 3zlr A:1-197 [197065]
        Other proteins in same PDB: d3zlra2
        automated match to d2yj1a_
        complexed with edo, so4, x0b
      2. 3021510Domain d3zlrb_: 3zlr B: [197287]
        Other proteins in same PDB: d3zlra2
        automated match to d2yj1a_
        complexed with edo, so4, x0b
    19. Domain for 4a1u:
    20. Domains for 4a1w:
      1. 3021530Domain d4a1wa1: 4a1w A:83-197 [186692]
        Other proteins in same PDB: d4a1wa2, d4a1wb2, d4a1wd2
        automated match to d1g5ja_
      2. 3021531Domain d4a1wb1: 4a1w B:1-197 [186693]
        Other proteins in same PDB: d4a1wa2, d4a1wb2, d4a1wd2
        automated match to d1g5ja_
      3. 3021532Domain d4a1wc_: 4a1w C: [186694]
        Other proteins in same PDB: d4a1wa2, d4a1wb2, d4a1wd2
        automated match to d1g5ja_
      4. 3021533Domain d4a1wd1: 4a1w D:1-196 [186695]
        Other proteins in same PDB: d4a1wa2, d4a1wb2, d4a1wd2
        automated match to d1g5ja_
    21. Domains for 4aq3:
      1. 3021494Domain d4aq3a_: 4aq3 A: [201495]
        automated match to d4aq3b_
        complexed with 398
      2. 3021495Domain d4aq3b_: 4aq3 B: [195239]
        automated match to d1g5ma_
        complexed with 398
      3. 3021496Domain d4aq3c_: 4aq3 C: [201496]
        automated match to d4aq3b_
        complexed with 398
      4. 3021497Domain d4aq3d_: 4aq3 D: [201497]
        automated match to d4aq3b_
        complexed with 398
      5. 3021498Domain d4aq3e_: 4aq3 E: [201498]
        automated match to d4aq3b_
        complexed with 398
      6. 3021499Domain d4aq3f_: 4aq3 F: [201499]
        automated match to d4aq3b_
        complexed with 398
    22. Domains for 4c52:
      1. 3021513Domain d4c52a1: 4c52 A:1-196 [236513]
        Other proteins in same PDB: d4c52a2, d4c52b2
        automated match to d3fdma_
        complexed with edo, so4, x0d
      2. 3021514Domain d4c52b1: 4c52 B:1-198 [236514]
        Other proteins in same PDB: d4c52a2, d4c52b2
        automated match to d3fdma_
        complexed with edo, so4, x0d
    23. Domains for 4c5d:
      1. 3021501Domain d4c5da1: 4c5d A:1-196 [236515]
        Other proteins in same PDB: d4c5da2, d4c5db2
        automated match to d3fdma_
        complexed with edo, so4, x0r
      2. 3021502Domain d4c5db1: 4c5d B:1-198 [236516]
        Other proteins in same PDB: d4c5da2, d4c5db2
        automated match to d3fdma_
        complexed with edo, so4, x0r
    24. Domains for 4cim:
      1. 3021488Domain d4cima_: 4cim A: [261068]
        automated match to d1zy3a1
        complexed with edo; mutant
      2. 3021489Domain d4cimb_: 4cim B: [260881]
        automated match to d1zy3a1
        complexed with edo; mutant
    25. Domains for 4cin:
      1. 3021528Domain d4cina1: 4cin A:21-197 [260882]
        Other proteins in same PDB: d4cina2, d4cinb2
        automated match to d1ysga_
        complexed with ca, edo, epe
      2. 3021529Domain d4cinb1: 4cin B:83-197 [260883]
        Other proteins in same PDB: d4cina2, d4cinb2
        automated match to d1ysga_
        complexed with ca, edo, epe
    26. Domain for 4ieh:
  2. 3021537Mouse (Mus musculus) [TaxId:10090] [187004] (1 PDB entry)
  3. 3021539Nematode (Caenorhabditis elegans) [TaxId:6239] [255025] (1 PDB entry)

More info for Protein automated matches from f.1.4.1: Bcl-2 inhibitors of programmed cell death

Timeline for Protein automated matches from f.1.4.1: Bcl-2 inhibitors of programmed cell death: