Class d: Alpha and beta proteins (a+b) [53931] (376 folds) |
Fold d.3: Cysteine proteinases [54000] (1 superfamily) consists of one alpha-helix and 4 strands of antiparallel beta-sheet and contains the catalytic triad Cys-His-Asn |
Superfamily d.3.1: Cysteine proteinases [54001] (23 families) the constitute families differ by insertion into and circular permutation of the common catalytic core made of one alpha-helix and 3-strands of beta-sheet |
Family d.3.1.0: automated matches [191342] (1 protein) not a true family |
Protein automated matches [190230] (9 species) not a true protein |
Blood fluke (Schistosoma mansoni) [TaxId:6183] [189710] (3 PDB entries) |
Domain d3qsda_: 3qsd A: [184608] automated match to d1qdqa_ complexed with 074, act, peg |
Domain d3s3qa_: 3s3q A: [185256] automated match to d1qdqa_ complexed with act, c1p |
Domain d3s3ra_: 3s3r A: [185257] automated match to d1qdqa_ complexed with 0iw |
Domain d3s3rb_: 3s3r B: [185258] automated match to d1qdqa_ complexed with 0iw |
Domain d3s3rc_: 3s3r C: [185259] automated match to d1qdqa_ complexed with 0iw |
Crocus sativus [TaxId:82528] [189777] (1 PDB entry) |
Domain d3u8ea_: 3u8e A: [186108] automated match to d1s4va_ complexed with gol, na, so4 |
Fasciola hepatica [TaxId:6192] [188299] (1 PDB entry) |
Domain d2o6xa_: 2o6x A: [166568] automated match to d1by8a_ |
Human (Homo sapiens) [TaxId:9606] [187072] (8 PDB entries) |
Domain d2etlb_: 2etl B: [132362] Other proteins in same PDB: d2etla1 automated match to d1uch__ complexed with cl |
Domain d2y5ba_: 2y5b A: [170606] automated match to d2ibia1 complexed with so4, zn |
Domain d2y5be_: 2y5b E: [170607] automated match to d2ibia1 complexed with so4, zn |
Domain d2zfya_: 2zfy A: [171201] automated match to d1tffa_ |
Domain d3a7sa_: 3a7s A: [171848] automated match to d1ucha_ complexed with cl |
Domain d3i3ta_: 3i3t A: [178066] Other proteins in same PDB: d3i3tb_, d3i3td_, d3i3tf_, d3i3th_ automated match to d2ibia1 complexed with neh, zn |
Domain d3i3tc_: 3i3t C: [178068] Other proteins in same PDB: d3i3tb_, d3i3td_, d3i3tf_, d3i3th_ automated match to d2ibia1 complexed with neh, zn |
Domain d3i3te_: 3i3t E: [178070] Other proteins in same PDB: d3i3tb_, d3i3td_, d3i3tf_, d3i3th_ automated match to d2ibia1 complexed with neh, zn |
Domain d3i3tg_: 3i3t G: [178072] Other proteins in same PDB: d3i3tb_, d3i3td_, d3i3tf_, d3i3th_ automated match to d2ibia1 complexed with neh, zn |
Domain d3mtna_: 3mtn A: [181546] Other proteins in same PDB: d3mtnb_, d3mtnd_ automated match to d2ibia1 complexed with cl, gol, zn |
Domain d3mtnc_: 3mtn C: [181548] Other proteins in same PDB: d3mtnb_, d3mtnd_ automated match to d2ibia1 complexed with cl, gol, zn |
Domain d3riia_: 3rii A: [184984] automated match to d1ucha_ complexed with edo, mg |
Domain d3riib_: 3rii B: [184985] automated match to d1ucha_ complexed with edo, mg |
Domain d3risa_: 3ris A: [184990] automated match to d1ucha_ complexed with gol, so4 |
Domain d3risb_: 3ris B: [184991] automated match to d1ucha_ complexed with gol, so4 |
Domain d3risc_: 3ris C: [184992] automated match to d1ucha_ complexed with gol, so4 |
Domain d3risd_: 3ris D: [184993] automated match to d1ucha_ complexed with gol, so4 |
Malaria parasite (Plasmodium falciparum) [TaxId:5833] [189172] (2 PDB entries) |
Domain d2wdta_: 2wdt A: [169255] Other proteins in same PDB: d2wdtb_, d2wdtd_ automated match to d1ucha_ complexed with cl |
Domain d2wdtc_: 2wdt C: [169257] Other proteins in same PDB: d2wdtb_, d2wdtd_ automated match to d1ucha_ complexed with cl |
Domain d2we6a_: 2we6 A: [169270] automated match to d1ucha_ |
Domain d2we6b_: 2we6 B: [169271] automated match to d1ucha_ |
Rhizobium loti [TaxId:381] [186994] (1 PDB entry) |
Domain d2bszb_: 2bsz B: [129132] Other proteins in same PDB: d2bsza1 automated match to d1gx3a_ |
Toxoplasma gondii [TaxId:383379] [188681] (1 PDB entry) |
Domain d3f75a_: 3f75 A: [175538] automated match to d1fh0a_ complexed with cl, edo |
Trypanosome (Trypanosoma brucei) [TaxId:5691] [189337] (2 PDB entries) |
Domain d3hhia_: 3hhi A: [177576] automated match to d1pbha_ complexed with 074, gol, li, mg, trs |
Domain d3hhib_: 3hhi B: [177577] automated match to d1pbha_ complexed with 074, gol, li, mg, trs |
Domain d3mora_: 3mor A: [181467] automated match to d1pbha_ complexed with cl, gol, na |
Domain d3morb_: 3mor B: [181468] automated match to d1pbha_ complexed with cl, gol, na |
Yellow mealworm (Tenebrio molitor) [TaxId:7067] [189891] (1 PDB entry) |
Domain d3qj3a_: 3qj3 A: [184410] automated match to d7pcka_ complexed with act |
Domain d3qj3b_: 3qj3 B: [184411] automated match to d7pcka_ complexed with act |
Timeline for Protein automated matches from d.3.1.0: automated matches: