Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. Fold d.122: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase [55873] (1 superfamily)
    8-stranded mixed beta-sheet; 2 layers: alpha/beta
  4. Superfamily d.122.1: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase [55874] (5 families) (S)
  5. Family d.122.1.1: Heat shock protein 90, HSP90, N-terminal domain [55875] (2 proteins)
  6. Protein automated matches [190229] (13 species)
    not a true protein

Species:

  1. Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [187543] (7 PDB entries)
    1. Domain for 2cgf:
    2. Domain for 2wep:
    3. Domain for 2weq:
    4. Domains for 2wer:
      1. Domain d2wera_: 2wer A: [169280]
        automated match to d1ah8b_
        complexed with rdc; mutant
      2. Domain d2werb_: 2wer B: [169281]
        automated match to d1ah8b_
        complexed with rdc; mutant
    5. Domain for 2yga:
    6. Domain for 2yge:
    7. Domain for 2ygf:
  2. Barley (Hordeum vulgare) [TaxId:4513] [225951] (1 PDB entry)
  3. Candida albicans [TaxId:237561] [363057] (6 PDB entries)
    1. Domain for 6cji:
    2. Domain for 6cjj:
    3. Domains for 6cjl:
      1. Domain d6cjla1: 6cjl A:7-218 [363090]
        Other proteins in same PDB: d6cjla2, d6cjlb2
        automated match to d4xkaa_
        complexed with mg, rdc
      2. Domain d6cjlb1: 6cjl B:7-218 [363069]
        Other proteins in same PDB: d6cjla2, d6cjlb2
        automated match to d4xkaa_
        complexed with mg, rdc
    4. Domains for 6cjp:
      1. Domain d6cjpa1: 6cjp A:7-217 [363085]
        Other proteins in same PDB: d6cjpa2
        automated match to d4xkaa_
        complexed with f5s
      2. Domain d6cjpb_: 6cjp B: [363058]
        Other proteins in same PDB: d6cjpa2
        automated match to d4xkaa_
        complexed with f5s
    5. Domains for 6cjr:
      1. Domain d6cjra1: 6cjr A:7-218 [363070]
        Other proteins in same PDB: d6cjra2
        automated match to d4xkaa_
        complexed with e0g, edo
      2. Domain d6cjrb_: 6cjr B: [363067]
        Other proteins in same PDB: d6cjra2
        automated match to d4xkaa_
        complexed with e0g, edo
    6. Domain for 6cjs:
  4. Cryptococcus neoformans [TaxId:5207] [399141] (4 PDB entries)
    1. Domains for 7k9r:
      1. Domain d7k9ra1: 7k9r A:1-211 [399156]
        Other proteins in same PDB: d7k9ra2, d7k9rb2
        automated match to d3nmqa_
        complexed with cl
      2. Domain d7k9rb1: 7k9r B:1-211 [399142]
        Other proteins in same PDB: d7k9ra2, d7k9rb2
        automated match to d3nmqa_
        complexed with cl
      3. Domain d7k9rc_: 7k9r C: [399147]
        Other proteins in same PDB: d7k9ra2, d7k9rb2
        automated match to d3nmqa_
        complexed with cl
    2. Domains for 7k9u:
      1. Domain d7k9ua_: 7k9u A: [399154]
        automated match to d2iwxa_
        complexed with w8y
      2. Domain d7k9ub_: 7k9u B: [399155]
        automated match to d2iwxa_
        complexed with w8y
    3. Domains for 7k9v:
      1. Domain d7k9va_: 7k9v A: [399161]
        automated match to d2iwxa_
        complexed with ben, cl, gol, w8v
      2. Domain d7k9vb_: 7k9v B: [399189]
        automated match to d2iwxa_
        complexed with ben, cl, gol, w8v
    4. Domains for 7k9w:
      1. Domain d7k9wa_: 7k9w A: [399164]
        automated match to d2iwxa_
        complexed with ben, cl, w8s
      2. Domain d7k9wb_: 7k9w B: [399162]
        automated match to d2iwxa_
        complexed with ben, cl, w8s
  5. Human (Homo sapiens) [TaxId:9606] [187292] (113 PDB entries)
    1. Domain for 2bsm:
    2. Domains for 2bt0:
      1. Domain d2bt0a_: 2bt0 A: [129133]
        automated match to d1osfa_
        complexed with ct5
      2. Domain d2bt0b_: 2bt0 B: [129134]
        automated match to d1osfa_
        complexed with ct5
    3. Domain for 2byh:
    4. Domain for 2byi:
    5. Domains for 2bz5:
      1. Domain d2bz5a_: 2bz5 A: [129550]
        automated match to d1osfa_
        complexed with ab4
      2. Domain d2bz5b_: 2bz5 B: [129551]
        automated match to d1osfa_
        complexed with ab4
    6. Domain for 2ccs:
    7. Domain for 2cct:
    8. Domain for 2ccu:
    9. Domain for 2jjc:
    10. Domain for 2uwd:
    11. Domain for 2vci:
    12. Domain for 2vcj:
    13. Domain for 2wi1:
    14. Domains for 2wi2:
      1. Domain d2wi2a_: 2wi2 A: [169361]
        automated match to d1osfa_
        complexed with dms, zz3
      2. Domain d2wi2b_: 2wi2 B: [169362]
        automated match to d1osfa_
        complexed with dms, zz3
    15. Domain for 2wi3:
    16. Domain for 2wi4:
    17. Domain for 2wi5:
    18. Domain for 2wi6:
    19. Domain for 2wi7:
    20. Domains for 2xab:
      1. Domain d2xaba_: 2xab A: [244478]
        automated match to d4egia_
        complexed with vhd
      2. Domain d2xabb_: 2xab B: [244479]
        automated match to d4egia_
        complexed with vhd
    21. Domain for 2xdk:
    22. Domain for 2xdl:
    23. Domain for 2xds:
    24. Domain for 2xdu:
    25. Domain for 2xdx:
    26. Domain for 2xhr:
    27. Domain for 2xht:
    28. Domain for 2xhx:
    29. Domain for 2xjg:
    30. Domains for 2xjj:
      1. Domain d2xjja_: 2xjj A: [244522]
        automated match to d4egia_
        complexed with gol, l81
      2. Domain d2xjjb_: 2xjj B: [244523]
        automated match to d4egia_
        complexed with gol, l81
    31. Domain for 2xjx:
    32. Domain for 2xk2:
    33. Domain for 2ye2:
    34. Domain for 2ye3:
    35. Domain for 2ye4:
    36. Domain for 2ye5:
    37. Domain for 2ye6:
    38. Domain for 2ye7:
    39. Domain for 2ye8:
    40. Domain for 2ye9:
    41. Domain for 2yea:
    42. Domain for 2yeb:
    43. Domain for 2yec:
    44. Domain for 2yed:
    45. Domain for 2yee:
    46. Domain for 2yef:
    47. Domains for 2yeg:
      1. Domain d2yega_: 2yeg A: [244753]
        automated match to d4egia_
        complexed with xqg
      2. Domain d2yegb_: 2yeg B: [244754]
        automated match to d4egia_
        complexed with xqg
    48. Domain for 2yeh:
    49. Domain for 2yei:
    50. Domain for 2yej:
    51. Domain for 2yi0:
    52. Domain for 2yi5:
    53. Domain for 2yi6:
    54. Domain for 2yi7:
    55. Domains for 3b24:
      1. Domain d3b24a_: 3b24 A: [208504]
        automated match to d3b27a_
        complexed with b2j, mg
      2. Domain d3b24b_: 3b24 B: [208505]
        automated match to d3b26b_
        complexed with b2j, mg
    56. Domain for 3b25:
    57. Domains for 3b26:
      1. Domain d3b26a_: 3b26 A: [197368]
        automated match to d3r4pb_
        complexed with b2l
      2. Domain d3b26b_: 3b26 B: [193644]
        automated match to d3r4pb_
        complexed with b2l
    58. Domain for 3b27:
    59. Domains for 3b28:
      1. Domain d3b28a_: 3b28 A: [208507]
        automated match to d3b26b_
        complexed with b2x, gol, mg
      2. Domain d3b28b_: 3b28 B: [208508]
        automated match to d3b26b_
        complexed with b2x, gol, mg
    60. Domain for 3d0b:
    61. Domains for 3hek:
      1. Domain d3heka1: 3hek A:10-225 [177450]
        Other proteins in same PDB: d3heka2, d3hekb2
        automated match to d1osfa_
        complexed with bd0, po4
      2. Domain d3hekb1: 3hek B:9-225 [177451]
        Other proteins in same PDB: d3heka2, d3hekb2
        automated match to d1osfa_
        complexed with bd0, po4
    62. Domains for 3hhu:
      1. Domain d3hhua_: 3hhu A: [177584]
        automated match to d1osfa_
        complexed with 819
      2. Domain d3hhub_: 3hhu B: [177585]
        automated match to d1osfa_
        complexed with 819
    63. Domain for 3hyy:
    64. Domains for 3hyz:
      1. Domain d3hyza_: 3hyz A: [246625]
        automated match to d4egia_
        complexed with 42c
      2. Domain d3hyzb_: 3hyz B: [246626]
        automated match to d4egia_
        complexed with 42c
    65. Domain for 3hz1:
    66. Domain for 3hz5:
    67. Domain for 3k97:
    68. Domain for 3mnr:
    69. Domain for 3nmq:
    70. Domain for 3o0i:
    71. Domain for 3qtf:
    72. Domain for 3r91:
    73. Domain for 3r92:
    74. Domain for 3rkz:
    75. Domain for 3t0h:
    76. Domain for 3t0z:
    77. Domain for 3t10:
    78. Domains for 3t1k:
      1. Domain d3t1ka_: 3t1k A: [185609]
        automated match to d1osfa_
        complexed with anp, mg
      2. Domain d3t1kb_: 3t1k B: [185610]
        automated match to d1osfa_
        complexed with anp, mg
    79. Domains for 3t2s:
      1. Domain d3t2sa_: 3t2s A: [185618]
        automated match to d1osfa_
        complexed with ags, mg
      2. Domain d3t2sb_: 3t2s B: [185619]
        automated match to d1osfa_
        complexed with ags, mg
    80. Domain for 3vha:
    81. Domain for 3vhc:
    82. Domains for 3vhd:
      1. Domain d3vhda_: 3vhd A: [217818]
        automated match to d3b27a_
        complexed with vhe
      2. Domain d3vhdb_: 3vhd B: [217819]
        automated match to d3b27a_
        complexed with vhe
    83. Domains for 3wha:
      1. Domain d3whaa_: 3wha A: [236506]
        automated match to d3b26a_
        complexed with gol, mg, wha
      2. Domain d3whab_: 3wha B: [236505]
        automated match to d3b26a_
        complexed with gol, mg, wha
    84. Domains for 4awo:
      1. Domain d4awoa_: 4awo A: [219182]
        automated match to d4awpb_
        complexed with 99b
      2. Domain d4awob_: 4awo B: [219183]
        automated match to d4awpb_
        complexed with 99b
    85. Domains for 4awp:
      1. Domain d4awpa_: 4awp A: [201540]
        automated match to d4awpb_
        complexed with 99a
      2. Domain d4awpb_: 4awp B: [193555]
        automated match to d3rlra_
        complexed with 99a
    86. Domains for 4awq:
      1. Domain d4awqa_: 4awq A: [219184]
        automated match to d4awpb_
        complexed with 592
      2. Domain d4awqb_: 4awq B: [219185]
        automated match to d4awpb_
        complexed with 592
    87. Domain for 4b7p:
    88. Domain for 4bqg:
    89. Domain for 4bqj:
    90. Domain for 4cwf:
    91. Domain for 4cwn:
    92. Domain for 4cwo:
    93. Domain for 4cwp:
    94. Domain for 4cwq:
    95. Domain for 4cwr:
    96. Domain for 4cws:
    97. Domain for 4cwt:
    98. Domain for 4eeh:
    99. Domain for 4eft:
    100. Domain for 4efu:
    101. Domain for 4hy6:
    102. Domain for 4l8z:
    103. Domain for 4l90:
    104. Domain for 4l91:
    105. Domains for 4l93:
      1. Domain d4l93a_: 4l93 A: [266638]
        automated match to d2xjxa_
        complexed with s36
      2. Domain d4l93b_: 4l93 B: [266639]
        automated match to d2xjxa_
        complexed with s36
    106. Domain for 4l94:
    107. Domain for 4r3m:
    108. Domains for 5uc4:
      1. Domain d5uc4a1: 5uc4 A:1-217 [348117]
        Other proteins in same PDB: d5uc4a2, d5uc4c2
        automated match to d1uyma_
        complexed with 83s, dms, gol
      2. Domain d5uc4b_: 5uc4 B: [348195]
        Other proteins in same PDB: d5uc4a2, d5uc4c2
        automated match to d1uyma_
        complexed with 83s, dms, gol
      3. Domain d5uc4c1: 5uc4 C:1-217 [348397]
        Other proteins in same PDB: d5uc4a2, d5uc4c2
        automated match to d1uyma_
        complexed with 83s, dms, gol
      4. Domain d5uc4d_: 5uc4 D: [347585]
        Other proteins in same PDB: d5uc4a2, d5uc4c2
        automated match to d1uyma_
        complexed with 83s, dms, gol
    109. Domains for 5uch:
      1. Domain d5ucha1: 5uch A:1-217 [347831]
        Other proteins in same PDB: d5ucha2, d5uchc2
        automated match to d1uyma_
        complexed with 871, dms, gol
      2. Domain d5uchb_: 5uch B: [347870]
        Other proteins in same PDB: d5ucha2, d5uchc2
        automated match to d1uyma_
        complexed with 871, dms, gol
      3. Domain d5uchc1: 5uch C:1-217 [347881]
        Other proteins in same PDB: d5ucha2, d5uchc2
        automated match to d1uyma_
        complexed with 871, dms, gol
      4. Domain d5uchd_: 5uch D: [347886]
        Other proteins in same PDB: d5ucha2, d5uchc2
        automated match to d1uyma_
        complexed with 871, dms, gol
    110. Domains for 5uci:
      1. Domain d5ucia1: 5uci A:1-217 [347939]
        Other proteins in same PDB: d5ucia2, d5ucic2
        automated match to d1uyma_
        complexed with 874, dms, gol
      2. Domain d5ucib_: 5uci B: [347996]
        Other proteins in same PDB: d5ucia2, d5ucic2
        automated match to d1uyma_
        complexed with 874, dms, gol
      3. Domain d5ucic1: 5uci C:1-217 [347536]
        Other proteins in same PDB: d5ucia2, d5ucic2
        automated match to d1uyma_
        complexed with 874, dms, gol
      4. Domain d5ucid_: 5uci D: [347618]
        Other proteins in same PDB: d5ucia2, d5ucic2
        automated match to d1uyma_
        complexed with 874, dms, gol
    111. Domains for 5ucj:
      1. Domain d5ucja1: 5ucj A:1-217 [347628]
        Other proteins in same PDB: d5ucja2, d5ucjb2
        automated match to d1uyma_
        complexed with dms, ku3
      2. Domain d5ucjb1: 5ucj B:1-217 [347587]
        Other proteins in same PDB: d5ucja2, d5ucjb2
        automated match to d1uyma_
        complexed with dms, ku3
      3. Domain d5ucjc_: 5ucj C: [347578]
        Other proteins in same PDB: d5ucja2, d5ucjb2
        automated match to d1uyma_
        complexed with dms, ku3
      4. Domain d5ucjd_: 5ucj D: [347593]
        Other proteins in same PDB: d5ucja2, d5ucjb2
        automated match to d1uyma_
        complexed with dms, ku3
    112. Domains for 6n8w:
      1. Domain d6n8wa1: 6n8w A:1-217 [370694]
        Other proteins in same PDB: d6n8wa2, d6n8wb2, d6n8wd2
        automated match to d2xjxa_
        complexed with gol
      2. Domain d6n8wb1: 6n8w B:1-218 [370697]
        Other proteins in same PDB: d6n8wa2, d6n8wb2, d6n8wd2
        automated match to d2xjxa_
        complexed with gol
      3. Domain d6n8wd1: 6n8w D:1-217 [370718]
        Other proteins in same PDB: d6n8wa2, d6n8wb2, d6n8wd2
        automated match to d2xjxa_
        complexed with gol
    113. Domain for 6n8y:
  6. Leishmania major [TaxId:347515] [195250] (5 PDB entries)
    1. Domain for 3h80:
    2. Domain for 3q5j:
    3. Domain for 3q5k:
    4. Domains for 3q5l:
      1. Domain d3q5la1: 3q5l A:1-208 [215064]
        Other proteins in same PDB: d3q5la2, d3q5lb2, d3q5lc2, d3q5ld2
        automated match to d3u67a_
        complexed with kx2
      2. Domain d3q5lb1: 3q5l B:1-208 [215065]
        Other proteins in same PDB: d3q5la2, d3q5lb2, d3q5lc2, d3q5ld2
        automated match to d3u67a_
        complexed with kx2
      3. Domain d3q5lc1: 3q5l C:1-208 [215066]
        Other proteins in same PDB: d3q5la2, d3q5lb2, d3q5lc2, d3q5ld2
        automated match to d3u67a_
        complexed with kx2
      4. Domain d3q5ld1: 3q5l D:1-208 [215067]
        Other proteins in same PDB: d3q5la2, d3q5lb2, d3q5lc2, d3q5ld2
        automated match to d3u67a_
        complexed with kx2
    5. Domain for 3u67:
  7. Mouse (Mus musculus) [TaxId:10090] [339980] (6 PDB entries)
    1. Domain for 5h22:
    2. Domain for 7d1v:
    3. Domain for 7d22:
    4. Domain for 7d24:
    5. Domain for 7d25:
    6. Domain for 7d26:
  8. Nematode (Caenorhabditis elegans) [TaxId:6239] [194727] (1 PDB entry)
  9. Oryza sativa [TaxId:39947] [273792] (1 PDB entry)
  10. Plasmodium falciparum [TaxId:36329] [189412] (1 PDB entry)
  11. Slime mold (Dictyostelium discoideum) [TaxId:44689] [269221] (8 PDB entries)
    1. Domain for 4xc0:
    2. Domain for 4xcj:
    3. Domain for 4xcl:
    4. Domain for 4xd8:
    5. Domain for 4xdm:
    6. Domain for 4xka:
    7. Domain for 4xkk:
    8. Domain for 4xko:
  12. Trypanosoma brucei [TaxId:5702] [224939] (1 PDB entry)
  13. Trypanosome (Trypanosoma brucei) [TaxId:5691] [189431] (2 PDB entries)
    1. Domains for 3o6o:
      1. Domain d3o6oa1: 3o6o A:1-208 [182839]
        Other proteins in same PDB: d3o6oa2
        automated match to d1uy6a_
        complexed with 1pe, 94m
      2. Domain d3o6ob_: 3o6o B: [182840]
        Other proteins in same PDB: d3o6oa2
        automated match to d1uy6a_
        complexed with 1pe, 94m
    2. Domains for 3omu:
      1. Domain d3omua1: 3omu A:2-208 [200102]
        Other proteins in same PDB: d3omua2
        automated match to d3omub_
        complexed with ibd
      2. Domain d3omub_: 3omu B: [196407]
        Other proteins in same PDB: d3omua2
        automated match to d3o6oa_
        complexed with ibd

More info for Protein automated matches from d.122.1.1: Heat shock protein 90, HSP90, N-terminal domain

Timeline for Protein automated matches from d.122.1.1: Heat shock protein 90, HSP90, N-terminal domain: