Species:

1. Ambystoma tigrinum [TaxId:8305] [225004] (1 PDB entry)

   • Domains for 1suj:

     1. Domain d1suja1: 1suj A:5-173 [202906] automated match to d1cf1b1

     2. Domain d1suja2: 1suj A:174-374 [202907] automated match to d1cf1b2

2. Bacillus amyloliquefaciens [TaxId:1390] [197052] (3 PDB entries)

   1. Domains for 2yow:

      1. Domain d2yowa_: 2yow A: [197055] automated match to d2bena_

      2. Domain d2yowb_: 2yow B: [198768] automated match to d2yowa_

   2. Domains for 2yox:

      1. Domain d2yoxa_: 2yox A: [207697] automated match to d2yoya_ complexed with cu1

      2. Domain d2yoxb_: 2yox B: [207698] automated match to d2yoya_ complexed with cu1

   3. Domains for 2yoy:

      1. Domain d2yoya_: 2yoy A: [197053] automated match to d2bena_ complexed with cu1, edo

      2. Domain d2yoyb_: 2yoy B: [198769] automated match to d2yoya_ complexed with cu1, edo

3. Bos taurus [TaxId:9913] [231496] (1 PDB entry)

   • Domain for 2wtr:

     • Domain d2wtrb2: 2wtr B:176-400 [231497] Other proteins in same PDB: d2wtra1, d2wtra2, d2wtrb1 automated match to d1g4ma2 complexed with ba

4. Camponotus japonicus [TaxId:84547] [236657] (1 PDB entry)

   • Domain for 3wea:

     • Domain d3weab_: 3wea B: [236658] automated match to d1nepa_

5. Cellulomonas fimi [TaxId:1708] [231539] (1 PDB entry)

   • Domains for 2x2y:

     1. Domain d2x2ya2: 2x2y A:371-465 [231540] Other proteins in same PDB: d2x2ya1, d2x2yb1 automated match to d2bvta1 complexed with fmt, mg; mutant

     2. Domain d2x2yb2: 2x2y B:371-465 [231542] Other proteins in same PDB: d2x2ya1, d2x2yb1 automated match to d2bvta1 complexed with fmt, mg; mutant

6. Chicken (Gallus gallus) [TaxId:9031] [225870] (6 PDB entries)

   1. Domain for 3hbg:

      • Domain d3hbga2: 3hbg A:344-466 [210977] Other proteins in same PDB: d3hbga1 automated match to d1ogpa1 complexed with mom, mte; mutant

   2. Domain for 3hbp:

      • Domain d3hbpa2: 3hbp A:344-466 [210979] Other proteins in same PDB: d3hbpa1 automated match to d1ogpa1 complexed with mom, mte, so3; mutant

   3. Domain for 3hbq:

      • Domain d3hbqa2: 3hbq A:344-466 [210981] Other proteins in same PDB: d3hbqa1 automated match to d1ogpa1 complexed with gol, mom, mte; mutant

   4. Domain for 3hc2:

      • Domain d3hc2a2: 3hc2 A:344-466 [210996] Other proteins in same PDB: d3hc2a1 automated match to d1ogpa1 complexed with mo, mte; mutant

   5. Domain for 3r18:

      • Domain d3r18a2: 3r18 A:344-466 [215526] Other proteins in same PDB: d3r18a1 automated match to d1ogpa1 complexed with mo, mte; mutant

   6. Domain for 3r19:

      • Domain d3r19a2: 3r19 A:344-466 [215528] Other proteins in same PDB: d3r19a1 automated match to d1ogpa1 complexed with mo, mte; mutant

7. Chikungunya virus [TaxId:37124] [226027] (3 PDB entries)

   1. Domain for 3n40:

      • Domain d3n40f2: 3n40 F:293-391 [213715] Other proteins in same PDB: d3n40f1 automated match to d2alaa1 complexed with act, nag

   2. Domain for 3n43:

      • Domain d3n43f2: 3n43 F:293-391 [213717] Other proteins in same PDB: d3n43f1 automated match to d2alaa1 complexed with act, nag

   3. Domain for 3n44:

      • Domain d3n44f2: 3n44 F:293-391 [213719] Other proteins in same PDB: d3n44f1 automated match to d2alaa1 complexed with act, nag, os

8. Dengue virus 1 [TaxId:11059] [226544] (2 PDB entries)

   1. Domains for 4gsx:

      1. Domain d4gsxa2: 4gsx A:298-403 [222124] Other proteins in same PDB: d4gsxa1, d4gsxb1 automated match to d1urza1 complexed with cd, cl, nag

      2. Domain d4gsxb2: 4gsx B:298-404 [222126] Other proteins in same PDB: d4gsxa1, d4gsxb1 automated match to d1urza1 complexed with cd, cl, nag

   2. Domains for 4gt0:

      1. Domain d4gt0a2: 4gt0 A:298-403 [222132] Other proteins in same PDB: d4gt0a1, d4gt0b1 automated match to d1urza1 complexed with cd, cl, nag

      2. Domain d4gt0b2: 4gt0 B:298-404 [222134] Other proteins in same PDB: d4gt0a1, d4gt0b1 automated match to d1urza1 complexed with cd, cl, nag

9. Dengue virus 2 thailand/16681/84 [TaxId:31634] [231877] (1 PDB entry)

   • Domain for 3c5x:

     • Domain d3c5xa2: 3c5x A:298-394 [231878] Other proteins in same PDB: d3c5xa1 automated match to d1ok8a1 protein/RNA complex; complexed with bma, shd

10. Dengue virus 4 [TaxId:11070] [195988] (1 PDB entry)

    • Domain for 3uyp:

      • Domain d3uypb_: 3uyp B: [195989] Other proteins in same PDB: d3uypa1, d3uypa2 automated match to d2jsfa1 complexed with gol, so4, trs

11. Dengue virus type 3 [TaxId:408870] [193303] (1 PDB entry)

    • Domains for 3vtt:

      1. Domain d3vtta_: 3vtt A: [193304] automated match to d2jsfa1 complexed with so4

      2. Domain d3vttb_: 3vtt B: [201256] automated match to d3vtta_ complexed with so4

12. Dengue virus type 4 [TaxId:408871] [236276] (1 PDB entry)

    • Domains for 3we1:

      1. Domain d3we1a_: 3we1 A: [236277] automated match to d1s6na_

      2. Domain d3we1b_: 3we1 B: [236278] automated match to d1s6na_

13. Enterococcus faecalis [TaxId:1351] [189861] (7 PDB entries)

    1. Domain for 4a02:

       • Domain d4a02a_: 4a02 A: [186686] automated match to d2bema_

    2. Domain for 4alc:

       • Domain d4alca_: 4alc A: [192643] automated match to d4a02a_ complexed with cu, peg

    3. Domain for 4ale:

       • Domain d4alea_: 4ale A: [192639] automated match to d4a02a_ complexed with cu, peg

    4. Domain for 4alq:

       • Domain d4alqa_: 4alq A: [192642] automated match to d4a02a_ complexed with cu, peg

    5. Domain for 4alr:

       • Domain d4alra_: 4alr A: [192640] automated match to d4a02a_ complexed with cu, peg

    6. Domain for 4als:

       • Domain d4alsa_: 4als A: [192638] automated match to d4a02a_ complexed with cu, peg

    7. Domain for 4alt:

       • Domain d4alta_: 4alt A: [192641] automated match to d4a02a_ complexed with cu, peg

14. Human (Homo sapiens) [TaxId:9606] [186988] (3 PDB entries)

    1. Domain for 2bp3:

       • Domain d2bp3b_: 2bp3 B: [128920] Other proteins in same PDB: d2bp3a1 automated match to d1v05a_ complexed with gol

    2. Domain for 2brq:

       • Domain d2brqb_: 2brq B: [129009] Other proteins in same PDB: d2brqa1 automated match to d1v05a_ complexed with gol, gsh

    3. Domains for 3rgh:

       1. Domain d3rgha_: 3rgh A: [184950] automated match to d2diaa1 complexed with act

       2. Domain d3rghb_: 3rgh B: [184951] automated match to d2diaa1 complexed with act

15. Japanese encephalitis virus [TaxId:11072] [226037] (1 PDB entry)

    • Domain for 3p54:

      • Domain d3p54a2: 3p54 A:300-404 [214663] Other proteins in same PDB: d3p54a1 automated match to d1urza1

16. Listeria monocytogenes [TaxId:1639] [225010] (1 PDB entry)

    • Domain for 1xeu:

      • Domain d1xeua2: 1xeu A:217-297 [203142] Other proteins in same PDB: d1xeua1 automated match to d1m9sa1

17. Listeria monocytogenes [TaxId:169963] [225327] (7 PDB entries)

    1. Domains for 2uzx:

       1. Domain d2uzxa2: 2uzx A:241-320 [206193] Other proteins in same PDB: d2uzxa1, d2uzxc1 automated match to d1m9sa1

       2. Domain d2uzxc2: 2uzx C:241-320 [206195] Other proteins in same PDB: d2uzxa1, d2uzxc1 automated match to d1m9sa1

    2. Domains for 2wqu:

       1. Domain d2wqua2: 2wqu A:241-320 [206945] Other proteins in same PDB: d2wqua1, d2wqub1, d2wquc1, d2wqud1, d2wque1, d2wquf1 automated match to d1m9sa1 complexed with gol, so4

       2. Domain d2wqub2: 2wqu B:241-320 [206947] Other proteins in same PDB: d2wqua1, d2wqub1, d2wquc1, d2wqud1, d2wque1, d2wquf1 automated match to d1m9sa1 complexed with gol, so4

       3. Domain d2wquc2: 2wqu C:241-318 [206949] Other proteins in same PDB: d2wqua1, d2wqub1, d2wquc1, d2wqud1, d2wque1, d2wquf1 automated match to d1m9sa1 complexed with gol, so4

       4. Domain d2wqud2: 2wqu D:241-321 [206951] Other proteins in same PDB: d2wqua1, d2wqub1, d2wquc1, d2wqud1, d2wque1, d2wquf1 automated match to d1m9sa1 complexed with gol, so4

       5. Domain d2wque2: 2wqu E:241-320 [206953] Other proteins in same PDB: d2wqua1, d2wqub1, d2wquc1, d2wqud1, d2wque1, d2wquf1 automated match to d1m9sa1 complexed with gol, so4

       6. Domain d2wquf2: 2wqu F:241-320 [206955] Other proteins in same PDB: d2wqua1, d2wqub1, d2wquc1, d2wqud1, d2wque1, d2wquf1 automated match to d1m9sa1 complexed with gol, so4

    3. Domains for 2wqv:

       1. Domain d2wqva2: 2wqv A:241-320 [206957] Other proteins in same PDB: d2wqva1, d2wqvb1 automated match to d1m9sa1 complexed with pg4, pge

       2. Domain d2wqvb2: 2wqv B:241-320 [206959] Other proteins in same PDB: d2wqva1, d2wqvb1 automated match to d1m9sa1 complexed with pg4, pge

    4. Domains for 2wqw:

       1. Domain d2wqwa2: 2wqw A:241-321 [206961] Other proteins in same PDB: d2wqwa1, d2wqwb1 automated match to d1m9sa1 complexed with peg

       2. Domain d2wqwb2: 2wqw B:241-321 [206963] Other proteins in same PDB: d2wqwa1, d2wqwb1 automated match to d1m9sa1 complexed with peg

    5. Domains for 2wqx:

       1. Domain d2wqxa2: 2wqx A:241-321 [206965] Other proteins in same PDB: d2wqxa1, d2wqxb1 automated match to d1m9sa1 mutant

       2. Domain d2wqxb2: 2wqx B:241-321 [206967] Other proteins in same PDB: d2wqxa1, d2wqxb1 automated match to d1m9sa1 mutant

    6. Domains for 4aw4:

       1. Domain d4aw4a2: 4aw4 A:263-342 [234102] Other proteins in same PDB: d4aw4a1, d4aw4b1, d4aw4c1 automated match to d1h6ua1 complexed with gol, so4

       2. Domain d4aw4b2: 4aw4 B:263-342 [234104] Other proteins in same PDB: d4aw4a1, d4aw4b1, d4aw4c1 automated match to d1h6ua1 complexed with gol, so4

    7. Domains for 4cc4:

       1. Domain d4cc4a2: 4cc4 A:220-297 [234302] Other proteins in same PDB: d4cc4a1, d4cc4b_, d4cc4c1, d4cc4d_, d4cc4e1, d4cc4f_ automated match to d4cc4e2 complexed with cl, gol, pe4, po4, so4

       2. Domain d4cc4c2: 4cc4 C:220-298 [234305] Other proteins in same PDB: d4cc4a1, d4cc4b_, d4cc4c1, d4cc4d_, d4cc4e1, d4cc4f_ automated match to d4cc4e2 complexed with cl, gol, pe4, po4, so4

       3. Domain d4cc4e2: 4cc4 E:220-297 [228588] Other proteins in same PDB: d4cc4a1, d4cc4b_, d4cc4c1, d4cc4d_, d4cc4e1, d4cc4f_ automated match to d2omza1 complexed with cl, gol, pe4, po4, so4

18. Magnetospirillum magnetotacticum [TaxId:188] [231564] (1 PDB entry)

    • Domain for 2x6c:

      • Domain d2x6ca2: 2x6c A:138-299 [231565] Other proteins in same PDB: d2x6ca1 automated match to d1p7ba1 complexed with cl, k, pc, sm

19. Mouse (Mus musculus) [TaxId:10090] [226768] (1 PDB entry)

    • Domains for 3jv5:

      1. Domain d3jv5a_: 3jv5 A: [212117] automated match to d1my5a_

      2. Domain d3jv5b_: 3jv5 B: [212118] automated match to d1my5a_

      3. Domain d3jv5c_: 3jv5 C: [212119] automated match to d1my5a_

      4. Domain d3jv5d_: 3jv5 D: [212120] automated match to d1my5a_

20. Paracoccus denitrificans [TaxId:266] [187968] (3 PDB entries)

    1. Domains for 2ox5:

       1. Domain d2ox5a_: 2ox5 A: [166888] automated match to d1v8ha1 complexed with act, edo, so4

       2. Domain d2ox5c_: 2ox5 C: [166889] automated match to d1v8ha1 complexed with act, edo, so4

       3. Domain d2ox5e_: 2ox5 E: [166890] automated match to d1v8ha1 complexed with act, edo, so4

       4. Domain d2ox5z_: 2ox5 Z: [166891] automated match to d1v8ha1 complexed with act, edo, so4

    2. Domains for 2oxg:

       1. Domain d2oxga_: 2oxg A: [166902] automated match to d1v8ha1 complexed with edo, so4

       2. Domain d2oxgc_: 2oxg C: [166903] automated match to d1v8ha1 complexed with edo, so4

       3. Domain d2oxge_: 2oxg E: [166904] automated match to d1v8ha1 complexed with edo, so4

       4. Domain d2oxgz_: 2oxg Z: [166905] automated match to d1v8ha1 complexed with edo, so4

    3. Domains for 2oxh:

       1. Domain d2oxha_: 2oxh A: [166906] automated match to d1v8ha1 complexed with edo

       2. Domain d2oxhc_: 2oxh C: [166907] automated match to d1v8ha1 complexed with edo

       3. Domain d2oxhe_: 2oxh E: [166908] automated match to d1v8ha1 complexed with edo

       4. Domain d2oxhz_: 2oxh Z: [166909] automated match to d1v8ha1 complexed with edo

21. Porphyromonas gingivalis [TaxId:242619] [226635] (1 PDB entry)

    • Domains for 4ief:

      1. Domain d4iefb2: 4ief B:580-661 [223141] Other proteins in same PDB: d4iefb1, d4iefd1, d4ieff1, d4iefh1 automated match to d1cvra1 complexed with ba, ca, cl, gol, mg, na, trs

      2. Domain d4iefd2: 4ief D:580-661 [223143] Other proteins in same PDB: d4iefb1, d4iefd1, d4ieff1, d4iefh1 automated match to d1cvra1 complexed with ba, ca, cl, gol, mg, na, trs

      3. Domain d4ieff2: 4ief F:580-661 [223145] Other proteins in same PDB: d4iefb1, d4iefd1, d4ieff1, d4iefh1 automated match to d1cvra1 complexed with ba, ca, cl, gol, mg, na, trs

      4. Domain d4iefh2: 4ief H:580-661 [223147] Other proteins in same PDB: d4iefb1, d4iefd1, d4ieff1, d4iefh1 automated match to d1cvra1 complexed with ba, ca, cl, gol, mg, na, trs

22. Salmonella enterica [TaxId:90371] [225882] (1 PDB entry)

    • Domains for 3mga:

      1. Domain d3mgaa1: 3mga A:7-155 [213249] Other proteins in same PDB: d3mgaa2, d3mgab2 automated match to d2b20a1 complexed with cl, gol, mg, na, peg

      2. Domain d3mgab1: 3mga B:9-155 [213251] Other proteins in same PDB: d3mgaa2, d3mgab2 automated match to d2b20a1 complexed with cl, gol, mg, na, peg

More info for Protein automated matches from b.1.18.0: automated matches

Timeline for Protein automated matches from b.1.18.0: automated matches:

• Protein automated matches from b.1.18.0: automated matches first appeared in SCOPe 2.01
  
• Protein automated matches from b.1.18.0: automated matches appears in SCOPe 2.02
  
• Protein automated matches from b.1.18.0: automated matches appears in SCOPe 2.04
  
• Protein automated matches from b.1.18.0: automated matches appears in the current release, SCOPe 2.08