SCOPe 2.01: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.01
Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
Fold d.129: TBP-like [55944] (11 superfamilies)
beta-alpha-beta(4)-alpha

Superfamily d.129.3: Bet v1-like [55961] (11 families)

(S)

contains a single copy of this fold with a alpha-beta2 insertion after the first helix; there is a cavity between the beta-sheet and the long C-terminal helix

Family d.129.3.0: automated matches [191339] (1 protein)
not a true family
Protein automated matches [190218] (4 species)
not a true protein

Species:

Celery (Apium graveolens) [TaxId:4045] [186978] (1 PDB entry)
- Domain for 2bk0:
  - Domain d2bk0b_: 2bk0 B: [128647]
    Other proteins in same PDB: d2bk0a1
    automated match to d1qmra_
Hypericum perforatum [TaxId:65561] [189103] (1 PDB entry)
- Domains for 3ie5:
  1. Domain d3ie5a_: 3ie5 A: [178262]
    automated match to d1e09a_
    complexed with 1pe, cl, pe8, peg, pg4, pge
  2. Domain d3ie5b_: 3ie5 B: [178263]
    automated match to d1e09a_
    complexed with 1pe, cl, pe8, peg, pg4, pge
Mung bean (Vigna radiata) [TaxId:157791] [187717] (2 PDB entries)
1. Domains for 2flh:
  1. Domain d2flha_: 2flh A: [164428]
    automated match to d1fm4a_
    complexed with na, zea
  2. Domain d2flhb_: 2flh B: [164429]
    automated match to d1fm4a_
    complexed with na, zea
  3. Domain d2flhc_: 2flh C: [164430]
    automated match to d1fm4a_
    complexed with na, zea
  4. Domain d2flhd_: 2flh D: [164431]
    automated match to d1fm4a_
    complexed with na, zea
2. Domains for 3c0v:
  1. Domain d3c0va_: 3c0v A: [172977]
    automated match to d1fm4a_
    complexed with epe, na, tbr, zea
  2. Domain d3c0vb_: 3c0v B: [172978]
    automated match to d1fm4a_
    complexed with epe, na, tbr, zea
  3. Domain d3c0vc_: 3c0v C: [172979]
    automated match to d1fm4a_
    complexed with epe, na, tbr, zea
  4. Domain d3c0vd_: 3c0v D: [172980]
    automated match to d1fm4a_
    complexed with epe, na, tbr, zea
Mycobacterium smegmatis [TaxId:246196] [189822] (1 PDB entry)
- Domains for 3uid:
  1. Domain d3uida_: 3uid A: [186316]
    automated match to d1xfsa_
  2. Domain d3uidb_: 3uid B: [186317]
    automated match to d1xfsa_

More info for Protein automated matches from d.129.3.0: automated matches

Timeline for Protein automated matches from d.129.3.0: automated matches:

Protein automated matches from d.129.3.0: automated matches is new in SCOPe 2.01-stable
Protein automated matches from d.129.3.0: automated matches appears in SCOPe 2.02
Protein automated matches from d.129.3.0: automated matches appears in the current release, SCOPe 2.08