Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2978075Fold d.137: Monooxygenase (hydroxylase) regulatory protein [56028] (1 superfamily)
    corner-like structure formed by two sheets and filled in with 2-3 helices
  4. 2978076Superfamily d.137.1: Monooxygenase (hydroxylase) regulatory protein [56029] (1 family) (S)
    duplication: consists of two beta-alpha-(beta)-beta(2) motifs; some topological similarity to the ferredoxin-like fold
  5. 2978077Family d.137.1.1: Monooxygenase (hydroxylase) regulatory protein [56030] (4 proteins)
    note: the solution structure determinations disagree in the relative orientations of two motifs
  6. 2978116Protein automated matches [190214] (3 species)
    not a true protein

Species:

  1. 2978117Methylosinus trichosporium [TaxId:595536] [392646] (10 PDB entries)
    1. Domains for 6vk4:
      1. 2978130Domain d6vk4d_: 6vk4 D: [392691]
        Other proteins in same PDB: d6vk4a_, d6vk4b_, d6vk4c_, d6vk4e_, d6vk4f_, d6vk4g_
        automated match to d1ckva_
        complexed with bez, edo, fe, fe2
      2. 2978131Domain d6vk4h_: 6vk4 H: [392687]
        Other proteins in same PDB: d6vk4a_, d6vk4b_, d6vk4c_, d6vk4e_, d6vk4f_, d6vk4g_
        automated match to d1ckva_
        complexed with bez, edo, fe, fe2
    2. Domains for 6vk5:
      1. 2978118Domain d6vk5d_: 6vk5 D: [392647]
        Other proteins in same PDB: d6vk5a_, d6vk5b_, d6vk5c_, d6vk5e_, d6vk5f_, d6vk5g_
        automated match to d1ckva_
        complexed with bez, cl, edo, fe
      2. 2978119Domain d6vk5h_: 6vk5 H: [392716]
        Other proteins in same PDB: d6vk5a_, d6vk5b_, d6vk5c_, d6vk5e_, d6vk5f_, d6vk5g_
        automated match to d1ckva_
        complexed with bez, cl, edo, fe
    3. Domains for 6vk8:
      1. 2978123Domain d6vk8d_: 6vk8 D: [392693]
        Other proteins in same PDB: d6vk8a_, d6vk8b_, d6vk8c_, d6vk8e_, d6vk8f_, d6vk8g_
        automated match to d1ckva_
        complexed with bez, edo, fe, sin
      2. 2978124Domain d6vk8h_: 6vk8 H: [392698]
        Other proteins in same PDB: d6vk8a_, d6vk8b_, d6vk8c_, d6vk8e_, d6vk8f_, d6vk8g_
        automated match to d1ckva_
        complexed with bez, edo, fe, sin
    4. Domain for 6yd0:
    5. Domain for 6ydi:
    6. Domain for 6ydu:
    7. Domain for 6yy3:
    8. Domains for 7m8q:
      1. 2978125Domain d7m8qd_: 7m8q D: [418364]
        Other proteins in same PDB: d7m8qa_, d7m8qb_, d7m8qc_, d7m8qe_, d7m8qf_, d7m8qg_
        automated match to d6vk5h_
        complexed with bez, edo, fe, ftr, na
      2. 2978126Domain d7m8qh_: 7m8q H: [418368]
        Other proteins in same PDB: d7m8qa_, d7m8qb_, d7m8qc_, d7m8qe_, d7m8qf_, d7m8qg_
        automated match to d6vk5h_
        complexed with bez, edo, fe, ftr, na
    9. Domains for 7m8r:
      1. 2978128Domain d7m8rd_: 7m8r D: [418372]
        Other proteins in same PDB: d7m8ra_, d7m8rb_, d7m8rc_, d7m8re_, d7m8rf_, d7m8rg_
        automated match to d6vk5h_
        complexed with bez, cl, edo, fe, w6x
      2. 2978129Domain d7m8rh_: 7m8r H: [418376]
        Other proteins in same PDB: d7m8ra_, d7m8rb_, d7m8rc_, d7m8re_, d7m8rf_, d7m8rg_
        automated match to d6vk5h_
        complexed with bez, cl, edo, fe, w6x
    10. Domains for 7s6r:
      1. 3085892Domain d7s6rh_: 7s6r H: [422209]
        Other proteins in same PDB: d7s6ra_, d7s6rb_, d7s6rc_, d7s6re_, d7s6rf_, d7s6rg_
        automated match to d6vk5h_
        complexed with bez, edo, fe; mutant
      2. 3085976Domain d7s6rd_: 7s6r D: [422293]
        Other proteins in same PDB: d7s6ra_, d7s6rb_, d7s6rc_, d7s6re_, d7s6rf_, d7s6rg_
        automated match to d6vk5h_
        complexed with bez, edo, fe; mutant
  2. 2978132Pseudomonas mendocina [TaxId:300] [186971] (2 PDB entries)
    1. Domains for 2bf3:
      1. 2978133Domain d2bf3a_: 2bf3 A: [203592]
        automated match to d2bf2b_
        complexed with hto
      2. 2978134Domain d2bf3b_: 2bf3 B: [203593]
        automated match to d2bf2b_
        complexed with hto
    2. Domains for 2bf5:
      1. 2978135Domain d2bf5a_: 2bf5 A: [128405]
        automated match to d1g10a_
      2. 2978136Domain d2bf5b_: 2bf5 B: [128406]
        automated match to d1g10a_
  3. 2978137Pseudomonas stutzeri [TaxId:316] [187868] (2 PDB entries)
    1. Domain for 2inn:
    2. Domain for 2inp:

More info for Protein automated matches from d.137.1.1: Monooxygenase (hydroxylase) regulatory protein

Timeline for Protein automated matches from d.137.1.1: Monooxygenase (hydroxylase) regulatory protein: