Lineage for Protein: automated matches

  1. Root: SCOPe 2.01
  2. 929298Class b: All beta proteins [48724] (174 folds)
  3. 943163Fold b.22: TNF-like [49841] (1 superfamily)
    sandwich, 10 strands in 2 sheets; jelly-roll
  4. 943164Superfamily b.22.1: TNF-like [49842] (2 families) (S)
  5. 943165Family b.22.1.1: TNF-like [49843] (15 proteins)
  6. 943390Protein automated matches [190204] (2 species)
    not a true protein

Species:

  1. 943391Human (Homo sapiens) [TaxId:9606] [186956] (6 PDB entries)
    1. Domain for 1d2q:
    2. Domains for 2e7a:
      1. 943394Domain d2e7aa_: 2e7a A: [163888]
        automated match to d1a8ma_
        mutant
      2. 943395Domain d2e7ab_: 2e7a B: [163889]
        automated match to d1a8ma_
        mutant
      3. 943396Domain d2e7ac_: 2e7a C: [163890]
        automated match to d1a8ma_
        mutant
    3. Domains for 2wnu:
      1. 943397Domain d2wnub_: 2wnu B: [169486]
        Other proteins in same PDB: d2wnuc_, d2wnuf_
        automated match to d1pk6b_
        complexed with nag
      2. 943398Domain d2wnue_: 2wnu E: [169488]
        Other proteins in same PDB: d2wnuc_, d2wnuf_
        automated match to d1pk6b_
        complexed with nag
    4. Domains for 2wnv:
      1. 943392Domain d2wnvb_: 2wnv B: [169490]
        Other proteins in same PDB: d2wnvc_, d2wnvf_
        automated match to d1pk6b_
        complexed with 2dr, ca, nag
      2. 943393Domain d2wnve_: 2wnv E: [169492]
        Other proteins in same PDB: d2wnvc_, d2wnvf_
        automated match to d1pk6b_
        complexed with 2dr, ca, nag
    5. Domains for 3it8:
      1. 943402Domain d3it8a_: 3it8 A: [178607]
        automated match to d1tnfa_
        complexed with nag
      2. 943403Domain d3it8b_: 3it8 B: [178608]
        automated match to d1tnfa_
        complexed with nag
      3. 943404Domain d3it8c_: 3it8 C: [178609]
        automated match to d1tnfa_
        complexed with nag
      4. 943405Domain d3it8g_: 3it8 G: [178610]
        automated match to d1tnfa_
        complexed with nag
      5. 943406Domain d3it8h_: 3it8 H: [178611]
        automated match to d1tnfa_
        complexed with nag
      6. 943407Domain d3it8i_: 3it8 I: [178612]
        automated match to d1tnfa_
        complexed with nag
    6. Domains for 3lkj:
      1. 943399Domain d3lkja_: 3lkj A: [180346]
        automated match to d1alya_
        complexed with lkj, nag
      2. 943400Domain d3lkjb_: 3lkj B: [180347]
        automated match to d1alya_
        complexed with lkj, nag
      3. 943401Domain d3lkjc_: 3lkj C: [180348]
        automated match to d1alya_
        complexed with lkj, nag
  2. 943409Mouse (Mus musculus) [TaxId:10090] [189134] (2 PDB entries)
    1. Domains for 3k48:
      1. 943411Domain d3k48a_: 3k48 A: [179059]
        automated match to d1u5xa_
      2. 943412Domain d3k48b_: 3k48 B: [179060]
        automated match to d1u5xa_
      3. 943413Domain d3k48d_: 3k48 D: [179061]
        automated match to d1u5xa_
    2. Domain for 3me2:

More info for Protein automated matches from b.22.1.1: TNF-like

Timeline for Protein automated matches from b.22.1.1: TNF-like: