SCOPe 2.08: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.08
Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
Fold d.93: SH2-like [55549] (1 superfamily)
3 layers: a/b/a; antiparallel beta-sheet of 5 strands is flanked by two helices
Superfamily d.93.1: SH2 domain [55550] (2 families)
Family d.93.1.1: SH2 domain [55551] (35 proteins)
Pfam PF00017
Protein automated matches [190202] (2 species)
not a true protein

Species:

Human (Homo sapiens) [TaxId:9606] [186949] (18 PDB entries)
1. Domains for 2aug:
  1. Domain d2auga_: 2aug A: [203484]
    Other proteins in same PDB: d2augb2
    automated match to d2qmsa_
  2. Domain d2augb1: 2aug B:433-537 [203485]
    Other proteins in same PDB: d2augb2
    automated match to d2qmsa_
2. Domain for 2eyv:
  - Domain d2eyva2: 2eyv A:6-124 [132602]
    Other proteins in same PDB: d2eyva3, d2eyva4
    automated match to d2eyva1
3. Domain for 2iug:
  - Domain d2iuga1: 2iug A:10-112 [165692]
    Other proteins in same PDB: d2iuga2
    automated match to d1fu5a_
4. Domain for 2iuh:
  - Domain d2iuha1: 2iuh A:10-118 [165693]
    Other proteins in same PDB: d2iuha2
    automated match to d1fu5a_
5. Domains for 2iui:
  1. Domain d2iuia1: 2iui A:10-111 [165694]
    Other proteins in same PDB: d2iuia2, d2iuib2
    automated match to d1fu5a_
  2. Domain d2iuib1: 2iui B:1010-1111 [165695]
    Other proteins in same PDB: d2iuia2, d2iuib2
    automated match to d1fu5a_
6. Domains for 3k2m:
  1. Domain d3k2ma_: 3k2m A: [199601]
    Other proteins in same PDB: d3k2mc_, d3k2md_
    automated match to d3k2mb_
    complexed with po4
  2. Domain d3k2mb_: 3k2m B: [196464]
    Other proteins in same PDB: d3k2mc_, d3k2md_
    automated match to d3uyoa_
    complexed with po4
7. Domain for 3ove:
  - Domain d3ovea_: 3ove A: [183315]
    automated match to d1fhsa_
    complexed with cl
8. Domain for 3t04:
  - Domain d3t04a_: 3t04 A: [185602]
    Other proteins in same PDB: d3t04d1, d3t04d2
    automated match to d1ab2a_
    complexed with gol, so4
9. Domain for 3uyo:
  - Domain d3uyoa_: 3uyo A: [186434]
    Other proteins in same PDB: d3uyod_
    automated match to d1ab2a_
    complexed with so4
10. Domain for 4eih:
  - Domain d4eiha_: 4eih A: [196767]
    automated match to d3uyoa_
    complexed with cl
11. Domain for 4jgh:
  - Domain d4jgha1: 4jgh A:32-134 [252931]
    Other proteins in same PDB: d4jgha2, d4jgha3, d4jghb_, d4jghc_, d4jghd1, d4jghd2
    automated match to d2c9wa2
12. Domains for 4xz0:
  1. Domain d4xz0a1: 4xz0 A:1-132 [273942]
    Other proteins in same PDB: d4xz0a3
    automated match to d1m61a1
    complexed with 4n5, so4
  2. Domain d4xz0a2: 4xz0 A:133-257 [273943]
    Other proteins in same PDB: d4xz0a3
    automated match to d2oq1a2
    complexed with 4n5, so4
13. Domain for 5dc0:
  - Domain d5dc0b_: 5dc0 B: [313352]
    Other proteins in same PDB: d5dc0a_
    automated match to d3uyoa_
14. Domain for 5dc4:
  - Domain d5dc4a_: 5dc4 A: [313365]
    Other proteins in same PDB: d5dc4b_
    automated match to d3uyoa_
    complexed with gol
15. Domain for 5dc9:
  - Domain d5dc9a_: 5dc9 A: [313361]
    Other proteins in same PDB: d5dc9b_
    automated match to d3uyoa_
    complexed with gol, imd
16. Domain for 5jn0:
  - Domain d5jn0a_: 5jn0 A: [337481]
    automated match to d1ju5a_
    complexed with cl
17. Domain for 5kaz:
  - Domain d5kaza_: 5kaz A: [332981]
    automated match to d1i3za_
    complexed with so4
18. Domain for 5w3r:
  - Domain d5w3ra1: 5w3r A:519-628 [341911]
    Other proteins in same PDB: d5w3ra2
    automated match to d2hdvb_
    complexed with iph, po4
Mouse (Mus musculus) [TaxId:10090] [187800] (5 PDB entries)
1. Domains for 2hdv:
  1. Domain d2hdva1: 2hdv A:519-627 [165054]
    Other proteins in same PDB: d2hdva2
    automated match to d1rpyb_
  2. Domain d2hdvb_: 2hdv B: [165055]
    Other proteins in same PDB: d2hdva2
    automated match to d1rpyb_
2. Domains for 2hdx:
  1. Domain d2hdxa_: 2hdx A: [165056]
    automated match to d1rpyb_
  2. Domain d2hdxb_: 2hdx B: [165057]
    automated match to d1rpyb_
  3. Domain d2hdxc_: 2hdx C: [165058]
    automated match to d1rpyb_
  4. Domain d2hdxd_: 2hdx D: [165059]
    automated match to d1rpyb_
  5. Domain d2hdxe_: 2hdx E: [165060]
    automated match to d1rpyb_
  6. Domain d2hdxf_: 2hdx F: [165061]
    automated match to d1rpyb_
3. Domain for 3m7f:
  - Domain d3m7fa_: 3m7f A: [180909]
    automated match to d1nrva_
4. Domain for 3s9k:
  - Domain d3s9ka1: 3s9k A:5-110 [193809]
    Other proteins in same PDB: d3s9ka2
    automated match to d1luka_
    complexed with cit
5. Domains for 4tzi:
  1. Domain d4tzia_: 4tzi A: [271043]
    automated match to d1blka_
  2. Domain d4tzib_: 4tzi B: [271040]
    automated match to d1blka_

More info for Protein automated matches from d.93.1.1: SH2 domain

Timeline for Protein automated matches from d.93.1.1: SH2 domain:

Protein automated matches from d.93.1.1: SH2 domain first appeared in SCOPe 2.01
Protein automated matches from d.93.1.1: SH2 domain appears in SCOPe 2.07