SCOPe 2.02: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.02
Class b: All beta proteins [48724] (174 folds)
Fold b.2: Common fold of diphtheria toxin/transcription factors/cytochrome f [49379] (10 superfamilies)
sandwich; 9 strands in 2 sheet; greek-key; subclass of immunoglobin-like fold
Superfamily b.2.5: p53-like transcription factors [49417] (7 families)
Family b.2.5.2: p53 DNA-binding domain-like [81314] (3 proteins)
Protein automated matches [190198] (2 species)
not a true protein

Species:

Human (Homo sapiens) [TaxId:9606] [186941] (25 PDB entries)
1. Domains for 2ac0:
  1. Domain d2ac0a_: 2ac0 A: [126539]
    automated match to d1gzha_
    protein/DNA complex; complexed with zn
  2. Domain d2ac0b_: 2ac0 B: [126540]
    automated match to d1gzha_
    protein/DNA complex; complexed with zn
  3. Domain d2ac0c_: 2ac0 C: [126541]
    automated match to d1gzha_
    protein/DNA complex; complexed with zn
  4. Domain d2ac0d_: 2ac0 D: [126542]
    automated match to d1gzha_
    protein/DNA complex; complexed with zn
2. Domains for 2ady:
  1. Domain d2adya_: 2ady A: [126597]
    automated match to d1gzha_
    protein/DNA complex; complexed with zn
  2. Domain d2adyb_: 2ady B: [126598]
    automated match to d1gzha_
    protein/DNA complex; complexed with zn
3. Domains for 2ahi:
  1. Domain d2ahia_: 2ahi A: [126756]
    automated match to d1gzha_
    protein/DNA complex; complexed with zn
  2. Domain d2ahib_: 2ahi B: [126757]
    automated match to d1gzha_
    protein/DNA complex; complexed with zn
  3. Domain d2ahic_: 2ahi C: [126758]
    automated match to d1gzha_
    protein/DNA complex; complexed with zn
  4. Domain d2ahid_: 2ahi D: [126759]
    automated match to d1gzha_
    protein/DNA complex; complexed with zn
4. Domains for 2ata:
  1. Domain d2ataa_: 2ata A: [127285]
    automated match to d1gzha_
    protein/DNA complex; complexed with zn
  2. Domain d2atab_: 2ata B: [127286]
    automated match to d1gzha_
    protein/DNA complex; complexed with zn
  3. Domain d2atac_: 2ata C: [127287]
    automated match to d1gzha_
    protein/DNA complex; complexed with zn
  4. Domain d2atad_: 2ata D: [127288]
    automated match to d1gzha_
    protein/DNA complex; complexed with zn
5. Domain for 2bim:
  - Domain d2bimb_: 2bim B: [193853]
    automated match to d3igla_
    complexed with so4, zn; mutant
6. Domain for 2bin:
  - Domain d2bina_: 2bin A: [193852]
    automated match to d3igka_
    complexed with zn; mutant
7. Domain for 2bio:
  - Domain d2bioa_: 2bio A: [193854]
    automated match to d3igla_
    complexed with zn; mutant
8. Domain for 2bip:
  - Domain d2bipa_: 2bip A: [193855]
    automated match to d3igka_
    complexed with zn; mutant
9. Domain for 2biq:
  - Domain d2biqa_: 2biq A: [193834]
    automated match to d3igka_
    complexed with zn; mutant
10. Domain for 2j1w:
  - Domain d2j1wb_: 2j1w B: [193204]
    automated match to d3igla_
    complexed with zn; mutant
11. Domains for 2j1y:
  1. Domain d2j1ya_: 2j1y A: [165806]
    automated match to d1uola_
    complexed with ca, zn; mutant
  2. Domain d2j1yb_: 2j1y B: [165807]
    automated match to d1uola_
    complexed with ca, zn; mutant
  3. Domain d2j1yc_: 2j1y C: [165808]
    automated match to d1uola_
    complexed with ca, zn; mutant
  4. Domain d2j1yd_: 2j1y D: [165809]
    automated match to d1uola_
    complexed with ca, zn; mutant
12. Domain for 2j1z:
  - Domain d2j1zb_: 2j1z B: [193867]
    automated match to d3igla_
    complexed with zn; mutant
13. Domain for 2j20:
  - Domain d2j20b_: 2j20 B: [193868]
    automated match to d3igla_
    complexed with so4, zn; mutant
14. Domain for 2j21:
  - Domain d2j21b_: 2j21 B: [193869]
    automated match to d3igla_
    complexed with zn; mutant
15. Domains for 2ocj:
  1. Domain d2ocja_: 2ocj A: [139008]
    automated match to d3igla_
    complexed with zn
  2. Domain d2ocjb_: 2ocj B: [139009]
    automated match to d3igla_
    complexed with zn
  3. Domain d2ocjc_: 2ocj C: [139010]
    automated match to d3igla_
    complexed with zn
  4. Domain d2ocjd_: 2ocj D: [139011]
    automated match to d3igla_
    complexed with zn
16. Domain for 2wgx:
  - Domain d2wgxb_: 2wgx B: [193888]
    automated match to d3igla_
    complexed with zn; mutant
17. Domain for 2xwc:
  - Domain d2xwca_: 2xwc A: [170438]
    automated match to d1gzha_
    complexed with gol, tam, zn
18. Domains for 2xwr:
  1. Domain d2xwra_: 2xwr A: [170447]
    automated match to d1gzha_
    complexed with zn
  2. Domain d2xwrb_: 2xwr B: [170448]
    automated match to d1gzha_
    complexed with zn
19. Domains for 2ybg:
  1. Domain d2ybga_: 2ybg A: [170724]
    automated match to d1gzha_
    complexed with zn
  2. Domain d2ybgb_: 2ybg B: [170725]
    automated match to d1gzha_
    complexed with zn
  3. Domain d2ybgc_: 2ybg C: [170726]
    automated match to d1gzha_
    complexed with zn
  4. Domain d2ybgd_: 2ybg D: [170727]
    automated match to d1gzha_
    complexed with zn
20. Domains for 3kmd:
  1. Domain d3kmda_: 3kmd A: [179438]
    automated match to d1gzha_
    protein/DNA complex; complexed with zn
  2. Domain d3kmdb_: 3kmd B: [179439]
    automated match to d1gzha_
    protein/DNA complex; complexed with zn
  3. Domain d3kmdc_: 3kmd C: [179440]
    automated match to d1gzha_
    protein/DNA complex; complexed with zn
  4. Domain d3kmdd_: 3kmd D: [179441]
    automated match to d1gzha_
    protein/DNA complex; complexed with zn
21. Domains for 3qyn:
  1. Domain d3qyna_: 3qyn A: [184704]
    automated match to d1gzha_
    protein/DNA complex; complexed with zn
  2. Domain d3qynb_: 3qyn B: [184705]
    automated match to d1gzha_
    protein/DNA complex; complexed with zn
  3. Domain d3qync_: 3qyn C: [184706]
    automated match to d1gzha_
    protein/DNA complex; complexed with zn
  4. Domain d3qynd_: 3qyn D: [184707]
    automated match to d1gzha_
    protein/DNA complex; complexed with zn
22. Domains for 3us0:
  1. Domain d3us0a_: 3us0 A: [186380]
    automated match to d1gzha_
    protein/DNA complex; complexed with zn
  2. Domain d3us0b_: 3us0 B: [186381]
    automated match to d1gzha_
    protein/DNA complex; complexed with zn
  3. Domain d3us0c_: 3us0 C: [186382]
    automated match to d1gzha_
    protein/DNA complex; complexed with zn
  4. Domain d3us0d_: 3us0 D: [186383]
    automated match to d1gzha_
    protein/DNA complex; complexed with zn
23. Domains for 3us1:
  1. Domain d3us1a_: 3us1 A: [186384]
    automated match to d1gzha_
    protein/DNA complex; complexed with zn
  2. Domain d3us1d_: 3us1 D: [186385]
    automated match to d1gzha_
    protein/DNA complex; complexed with zn
24. Domain for 3vd1:
  - Domain d3vd1k_: 3vd1 K: [195565]
    automated match to d2xwca_
    protein/DNA complex; complexed with zn
25. Domains for 4a63:
  1. Domain d4a63a_: 4a63 A: [186722]
    automated match to d1gzha_
    complexed with act, zn
  2. Domain d4a63c_: 4a63 C: [186723]
    automated match to d1gzha_
    complexed with act, zn
  3. Domain d4a63e_: 4a63 E: [186724]
    automated match to d1gzha_
    complexed with act, zn
  4. Domain d4a63g_: 4a63 G: [186725]
    automated match to d1gzha_
    complexed with act, zn
  5. Domain d4a63i_: 4a63 I: [186726]
    automated match to d1gzha_
    complexed with act, zn
  6. Domain d4a63k_: 4a63 K: [186727]
    automated match to d1gzha_
    complexed with act, zn
Mouse (Mus musculus) [TaxId:10090] [187745] (7 PDB entries)
1. Domains for 2geq:
  1. Domain d2geqa_: 2geq A: [164670]
    automated match to d1hu8a_
    protein/DNA complex; complexed with trs, zn
  2. Domain d2geqb_: 2geq B: [164671]
    automated match to d1hu8a_
    protein/DNA complex; complexed with trs, zn
2. Domain for 2ioi:
  - Domain d2ioia_: 2ioi A: [165625]
    automated match to d1hu8a_
    complexed with trs, zn
3. Domain for 2iom:
  - Domain d2ioma_: 2iom A: [165626]
    automated match to d1hu8a_
    complexed with ipa, trs, zn
4. Domain for 2ioo:
  - Domain d2iooa_: 2ioo A: [165627]
    automated match to d1hu8a_
    complexed with zn
5. Domain for 2p52:
  - Domain d2p52a_: 2p52 A: [167007]
    automated match to d1hu8a_
6. Domains for 3exj:
  1. Domain d3exja_: 3exj A: [175289]
    automated match to d1hu8a_
    protein/DNA complex; protein/RNA complex; complexed with flc, zn
  2. Domain d3exjb_: 3exj B: [175290]
    automated match to d1hu8a_
    protein/DNA complex; protein/RNA complex; complexed with flc, zn
7. Domain for 3exl:
  - Domain d3exla_: 3exl A: [175291]
    automated match to d1hu8a_
    protein/DNA complex; protein/RNA complex; complexed with flc, zn

More info for Protein automated matches from b.2.5.2: p53 DNA-binding domain-like

Timeline for Protein automated matches from b.2.5.2: p53 DNA-binding domain-like:

Protein automated matches from b.2.5.2: p53 DNA-binding domain-like first appeared in SCOPe 2.01
Protein automated matches from b.2.5.2: p53 DNA-binding domain-like appears in SCOPe 2.03
Protein automated matches from b.2.5.2: p53 DNA-binding domain-like appears in the current release, SCOPe 2.08