Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2459598Fold c.51: Anticodon-binding domain-like [52953] (6 superfamilies)
    3 layers: a/b/a; mixed beta-sheet of five strands, order 21345; strand 4 is antiparallel to the rest
  4. 2459815Superfamily c.51.4: ITPase-like [52972] (4 families) (S)
    formerly Maf/Ham1; elaborated with additional structures inserted in the common fold
  5. 2459877Family c.51.4.0: automated matches [191335] (1 protein)
    not a true family
  6. 2459878Protein automated matches [190179] (8 species)
    not a true protein

Species:

  1. 2459879Burkholderia cenocepacia [TaxId:216591] [267984] (1 PDB entry)
  2. 2459882Coxiella burnetii [TaxId:227377] [226205] (1 PDB entry)
  3. 2459887Escherichia coli K-12 [TaxId:83333] [231183] (4 PDB entries)
    1. Domain for 2pyu:
    2. Domains for 2q16:
      1. 2459888Domain d2q16a_: 2q16 A: [231184]
        automated match to d3tqua_
        complexed with ca, itt, na, so4
      2. 2459889Domain d2q16b_: 2q16 B: [231185]
        automated match to d3tqua_
        complexed with ca, itt, na, so4
    3. Domains for 4jhc:
      1. 2459891Domain d4jhca_: 4jhc A: [252943]
        automated match to d4heba_
        complexed with gol, unx
      2. 2459892Domain d4jhcb_: 4jhc B: [252944]
        automated match to d4heba_
        complexed with gol, unx
    4. Domains for 4lu1:
      1. 2459893Domain d4lu1a_: 4lu1 A: [253692]
        automated match to d4heba_
        complexed with unx; mutant
      2. 2459894Domain d4lu1b_: 4lu1 B: [253693]
        automated match to d4heba_
        complexed with unx; mutant
  4. 2459895Escherichia coli [TaxId:1182738] [257387] (1 PDB entry)
  5. 2459898Escherichia coli [TaxId:83333] [257380] (1 PDB entry)
  6. 2459901Human (Homo sapiens) [TaxId:9606] [187020] (5 PDB entries)
    1. Domain for 2car:
    2. Domain for 2i5d:
    3. Domains for 2j4e:
      1. 2459907Domain d2j4ea_: 2j4e A: [137994]
        automated match to d1v7ra_
        complexed with imp, itt, mg, pop
      2. 2459908Domain d2j4eb_: 2j4e B: [137995]
        automated match to d1v7ra_
        complexed with imp, itt, mg, pop
      3. 2459909Domain d2j4ec_: 2j4e C: [137996]
        automated match to d1v7ra_
        complexed with imp, itt, mg, pop
      4. 2459910Domain d2j4ed_: 2j4e D: [137997]
        automated match to d1v7ra_
        complexed with imp, itt, mg, pop
      5. 2459911Domain d2j4ee_: 2j4e E: [137998]
        automated match to d1v7ra_
        complexed with imp, itt, mg, pop
      6. 2459912Domain d2j4ef_: 2j4e F: [137999]
        automated match to d1v7ra_
        complexed with imp, itt, mg, pop
      7. 2459913Domain d2j4eg_: 2j4e G: [138000]
        automated match to d1v7ra_
        complexed with imp, itt, mg, pop
      8. 2459914Domain d2j4eh_: 2j4e H: [138001]
        automated match to d1v7ra_
        complexed with imp, itt, mg, pop
    4. Domains for 2p5x:
      1. 2459905Domain d2p5xa_: 2p5x A: [243413]
        automated match to d1ex2a_
        complexed with po4
      2. 2459906Domain d2p5xb_: 2p5x B: [243414]
        automated match to d1ex2a_
        complexed with po4
    5. Domain for 4f95:
  7. 2459915Staphylococcus aureus [TaxId:46170] [226675] (1 PDB entry)
  8. 2459918Vibrio cholerae [TaxId:666] [186916] (2 PDB entries)
    1. Domains for 1zno:
      1. 2459922Domain d1znoa_: 1zno A: [125392]
        automated match to d1u14a_
        complexed with mg
      2. 2459923Domain d1znob_: 1zno B: [125393]
        automated match to d1u14a_
        complexed with mg
    2. Domains for 1zwy:
      1. 2459919Domain d1zwyb2: 1zwy B:1-182 [125754]
        Other proteins in same PDB: d1zwya1, d1zwyb3
        automated match to d1u14a_
      2. 2459920Domain d1zwyc_: 1zwy C: [125755]
        Other proteins in same PDB: d1zwya1, d1zwyb3
        automated match to d1u14a_
      3. 2459921Domain d1zwyd_: 1zwy D: [125756]
        Other proteins in same PDB: d1zwya1, d1zwyb3
        automated match to d1u14a_

More info for Protein automated matches from c.51.4.0: automated matches

Timeline for Protein automated matches from c.51.4.0: automated matches: