Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2101600Fold c.23: Flavodoxin-like [52171] (15 superfamilies)
    3 layers, a/b/a; parallel beta-sheet of 5 strand, order 21345
  4. 2101601Superfamily c.23.1: CheY-like [52172] (8 families) (S)
  5. 2101602Family c.23.1.1: CheY-related [52173] (26 protein domains)
  6. 2101883Protein automated matches [190177] (7 species)
    not a true protein

Species:

  1. 2101884Bacillus subtilis [TaxId:1423] [189041] (1 PDB entry)
  2. 2101887Bacillus subtilis [TaxId:224308] [189247] (1 PDB entry)
  3. 2101889Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [187251] (1 PDB entry)
  4. 2101891Escherichia coli K-12 [TaxId:83333] [189043] (17 PDB entries)
    1. Domain for 2lp4:
    2. Domains for 3f7n:
      1. 2101900Domain d3f7na_: 3f7n A: [175547]
        automated match to d1a0oa_
        complexed with bef, gol, mn, so4; mutant
      2. 2101901Domain d3f7nb_: 3f7n B: [175548]
        automated match to d1a0oa_
        complexed with bef, gol, mn, so4; mutant
    3. Domains for 3fft:
      1. 2101914Domain d3ffta_: 3fft A: [175760]
        automated match to d1a0oa_
        complexed with bef, gol, mn, so4; mutant
      2. 2101915Domain d3fftb_: 3fft B: [175761]
        automated match to d1a0oa_
        complexed with bef, gol, mn, so4; mutant
    4. Domains for 3ffw:
      1. 2101898Domain d3ffwa_: 3ffw A: [175762]
        automated match to d1miha_
        complexed with bef, gol, mn, so4; mutant
      2. 2101899Domain d3ffwb_: 3ffw B: [175763]
        automated match to d1miha_
        complexed with bef, gol, mn, so4; mutant
    5. Domains for 3ffx:
      1. 2101904Domain d3ffxa_: 3ffx A: [175764]
        automated match to d1miha_
        complexed with bef, gol, mn, so4; mutant
      2. 2101905Domain d3ffxb_: 3ffx B: [175765]
        automated match to d1miha_
        complexed with bef, gol, mn, so4; mutant
    6. Domains for 3fgz:
      1. 2101906Domain d3fgza_: 3fgz A: [175778]
        automated match to d1miha_
        complexed with bef, gol, mn, nh4; mutant
      2. 2101907Domain d3fgzb_: 3fgz B: [175779]
        automated match to d1miha_
        complexed with bef, gol, mn, nh4; mutant
    7. Domains for 3myy:
      1. 2101910Domain d3myya_: 3myy A: [181718]
        automated match to d1a0oa_
        complexed with bef, gol, mn, so4; mutant
      2. 2101911Domain d3myyb_: 3myy B: [181719]
        automated match to d1a0oa_
        complexed with bef, gol, mn, so4; mutant
    8. Domains for 3rvj:
      1. 2101912Domain d3rvja1: 3rvj A:1-129 [195429]
        Other proteins in same PDB: d3rvja2, d3rvjb2
        automated match to d1djma_
        complexed with bef, gol, mn, so4
      2. 2101913Domain d3rvjb1: 3rvj B:1-129 [195431]
        Other proteins in same PDB: d3rvja2, d3rvjb2
        automated match to d1djma_
        complexed with bef, gol, mn, so4
    9. Domain for 3rvk:
    10. Domains for 3rvl:
      1. 2101896Domain d3rvla_: 3rvl A: [216085]
        automated match to d3rvra_
        complexed with bef, gol, mn, so4
      2. 2101897Domain d3rvlb_: 3rvl B: [216086]
        automated match to d3rvra_
        complexed with bef, gol, mn, so4
    11. Domain for 3rvm:
    12. Domains for 3rvn:
      1. 2101916Domain d3rvna1: 3rvn A:1-129 [195440]
        Other proteins in same PDB: d3rvna2, d3rvnb2
        automated match to d1djma_
        complexed with bef, gol, mn, so4
      2. 2101917Domain d3rvnb1: 3rvn B:1-129 [200536]
        Other proteins in same PDB: d3rvna2, d3rvnb2
        automated match to d3rvna_
        complexed with bef, gol, mn, so4
    13. Domain for 3rvo:
    14. Domains for 3rvp:
      1. 2101918Domain d3rvpa1: 3rvp A:1-129 [216089]
        Other proteins in same PDB: d3rvpa2, d3rvpb2
        automated match to d3rvqa_
        complexed with bef, gol, mg, mn, so4
      2. 2101919Domain d3rvpb1: 3rvp B:1-129 [216090]
        Other proteins in same PDB: d3rvpa2, d3rvpb2
        automated match to d3rvqa_
        complexed with bef, gol, mg, mn, so4
    15. Domain for 3rvq:
    16. Domains for 3rvr:
      1. 2101908Domain d3rvra1: 3rvr A:1-129 [195430]
        Other proteins in same PDB: d3rvra2, d3rvrb2
        automated match to d1djma_
        complexed with gol, mn, moo, so4
      2. 2101909Domain d3rvrb1: 3rvr B:1-129 [195428]
        Other proteins in same PDB: d3rvra2, d3rvrb2
        automated match to d1djma_
        complexed with gol, mn, moo, so4
    17. Domains for 3rvs:
      1. 2101902Domain d3rvsa1: 3rvs A:1-129 [216091]
        Other proteins in same PDB: d3rvsa2, d3rvsb2
        automated match to d3rvra_
        complexed with gol, mn, so4, wo4
      2. 2101903Domain d3rvsb1: 3rvs B:1-129 [216092]
        Other proteins in same PDB: d3rvsa2, d3rvsb2
        automated match to d3rvra_
        complexed with gol, mn, so4, wo4
  5. 2101921Escherichia coli [TaxId:562] [186909] (5 PDB entries)
    1. Domains for 1zes:
      1. 2101926Domain d1zesa_: 1zes A: [124994]
        automated match to d1b00a_
        complexed with bef, mg
      2. 2101927Domain d1zesb_: 1zes B: [124995]
        automated match to d1b00a_
        complexed with bef, mg
      3. 2101928Domain d1zesc_: 1zes C: [124996]
        automated match to d1b00a_
        complexed with bef, mg
    2. Domains for 2iyn:
      1. 2101931Domain d2iyna_: 2iyn A: [137803]
        automated match to d1b00a_
        complexed with mg
      2. 2101932Domain d2iynb_: 2iyn B: [137804]
        automated match to d1b00a_
        complexed with mg
      3. 2101933Domain d2iync_: 2iyn C: [137805]
        automated match to d1b00a_
        complexed with mg
    3. Domains for 2j8e:
      1. 2101929Domain d2j8ea_: 2j8e A: [304105]
        automated match to d3fgza_
        complexed with bef, gol, mn, nh4
      2. 2101930Domain d2j8eb_: 2j8e B: [304106]
        automated match to d3fgza_
        complexed with bef, gol, mn, nh4
    4. Domains for 2jb9:
      1. 2101924Domain d2jb9a_: 2jb9 A: [165980]
        automated match to d1b00a_
        mutant
      2. 2101925Domain d2jb9b_: 2jb9 B: [165981]
        automated match to d1b00a_
        mutant
    5. Domains for 2jba:
      1. 2101922Domain d2jbaa_: 2jba A: [165982]
        automated match to d1b00a_
        complexed with na, trs; mutant
      2. 2101923Domain d2jbab_: 2jba B: [165983]
        automated match to d1b00a_
        complexed with na, trs; mutant
  6. 2101934Vibrio cholerae [TaxId:666] [194701] (5 PDB entries)
    1. Domain for 3to5:
    2. Domain for 4hnq:
    3. Domain for 4hns:
    4. Domain for 4jp1:
    5. Domain for 4lx8:
  7. 2269947Escherichia coli [TaxId:83334] [313252] (3 PDB entries)
    1. Domains for 5d2c:
      1. 2269948Domain d5d2cb_: 5d2c B: [313253]
        automated match to d3ffwa_
      2. 2270037Domain d5d2ca_: 5d2c A: [313342]
        automated match to d3ffwa_
    2. Domains for 5dgc:
      1. 2270295Domain d5dgcb_: 5dgc B: [313600]
        automated match to d3ffwa_
        complexed with bef, cl, gol, imd, mn
      2. 2271202Domain d5dgca_: 5dgc A: [314507]
        automated match to d3ffwa_
        complexed with bef, cl, gol, imd, mn
    3. Domains for 5dkf:
      1. 2270334Domain d5dkfa_: 5dkf A: [313639]
        automated match to d3ffwa_
        complexed with bef, gol, imd, mn
      2. 2270337Domain d5dkfb_: 5dkf B: [313642]
        automated match to d3ffwa_
        complexed with bef, gol, imd, mn

More info for Protein automated matches from c.23.1.1: CheY-related

Timeline for Protein automated matches from c.23.1.1: CheY-related: