Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2855423Fold c.23: Flavodoxin-like [52171] (15 superfamilies)
    3 layers, a/b/a; parallel beta-sheet of 5 strand, order 21345
  4. 2855424Superfamily c.23.1: CheY-like [52172] (8 families) (S)
  5. 2855425Family c.23.1.1: CheY-related [52173] (26 proteins)
  6. 2855710Protein automated matches [190177] (9 species)
    not a true protein

Species:

  1. 2855711Bacillus subtilis [TaxId:1423] [189041] (1 PDB entry)
  2. 2855714Bacillus subtilis [TaxId:224308] [189247] (1 PDB entry)
  3. 2855716Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [187251] (1 PDB entry)
  4. 2855718Escherichia coli K-12 [TaxId:83333] [189043] (16 PDB entries)
    1. Domains for 3f7n:
      1. 2855727Domain d3f7na_: 3f7n A: [175547]
        automated match to d1a0oa_
        complexed with bef, gol, mn, so4; mutant
      2. 2855728Domain d3f7nb_: 3f7n B: [175548]
        automated match to d1a0oa_
        complexed with bef, gol, mn, so4; mutant
    2. Domains for 3fft:
      1. 2855741Domain d3ffta_: 3fft A: [175760]
        automated match to d1a0oa_
        complexed with bef, gol, mn, so4; mutant
      2. 2855742Domain d3fftb_: 3fft B: [175761]
        automated match to d1a0oa_
        complexed with bef, gol, mn, so4; mutant
    3. Domains for 3ffw:
      1. 2855731Domain d3ffwa_: 3ffw A: [175762]
        automated match to d1miha_
        complexed with bef, gol, mn, so4; mutant
      2. 2855732Domain d3ffwb_: 3ffw B: [175763]
        automated match to d1miha_
        complexed with bef, gol, mn, so4; mutant
    4. Domains for 3ffx:
      1. 2855733Domain d3ffxa_: 3ffx A: [175764]
        automated match to d1miha_
        complexed with bef, gol, mn, so4; mutant
      2. 2855734Domain d3ffxb_: 3ffx B: [175765]
        automated match to d1miha_
        complexed with bef, gol, mn, so4; mutant
    5. Domains for 3fgz:
      1. 2855729Domain d3fgza_: 3fgz A: [175778]
        automated match to d1miha_
        complexed with bef, gol, mn, nh4; mutant
      2. 2855730Domain d3fgzb_: 3fgz B: [175779]
        automated match to d1miha_
        complexed with bef, gol, mn, nh4; mutant
    6. Domains for 3myy:
      1. 2855725Domain d3myya_: 3myy A: [181718]
        automated match to d1a0oa_
        complexed with bef, gol, mn, so4; mutant
      2. 2855726Domain d3myyb_: 3myy B: [181719]
        automated match to d1a0oa_
        complexed with bef, gol, mn, so4; mutant
    7. Domains for 3rvj:
      1. 2855739Domain d3rvja1: 3rvj A:1-129 [195429]
        Other proteins in same PDB: d3rvja2, d3rvjb2
        automated match to d1djma_
        complexed with bef, gol, mn, so4
      2. 2855740Domain d3rvjb1: 3rvj B:1-129 [195431]
        Other proteins in same PDB: d3rvja2, d3rvjb2
        automated match to d1djma_
        complexed with bef, gol, mn, so4
    8. Domain for 3rvk:
    9. Domains for 3rvl:
      1. 2855723Domain d3rvla_: 3rvl A: [216085]
        automated match to d3rvra_
        complexed with bef, gol, mn, so4
      2. 2855724Domain d3rvlb_: 3rvl B: [216086]
        automated match to d3rvra_
        complexed with bef, gol, mn, so4
    10. Domain for 3rvm:
    11. Domains for 3rvn:
      1. 2855743Domain d3rvna1: 3rvn A:1-129 [195440]
        Other proteins in same PDB: d3rvna2, d3rvnb2
        automated match to d1djma_
        complexed with bef, gol, mn, so4
      2. 2855744Domain d3rvnb1: 3rvn B:1-129 [200536]
        Other proteins in same PDB: d3rvna2, d3rvnb2
        automated match to d3rvna_
        complexed with bef, gol, mn, so4
    12. Domain for 3rvo:
    13. Domains for 3rvp:
      1. 2855745Domain d3rvpa1: 3rvp A:1-129 [216089]
        Other proteins in same PDB: d3rvpa2, d3rvpb2
        automated match to d3rvqa_
        complexed with bef, gol, mg, mn, so4
      2. 2855746Domain d3rvpb1: 3rvp B:1-129 [216090]
        Other proteins in same PDB: d3rvpa2, d3rvpb2
        automated match to d3rvqa_
        complexed with bef, gol, mg, mn, so4
    14. Domain for 3rvq:
    15. Domains for 3rvr:
      1. 2855735Domain d3rvra1: 3rvr A:1-129 [195430]
        Other proteins in same PDB: d3rvra2, d3rvrb2
        automated match to d1djma_
        complexed with gol, mn, moo, so4
      2. 2855736Domain d3rvrb1: 3rvr B:1-129 [195428]
        Other proteins in same PDB: d3rvra2, d3rvrb2
        automated match to d1djma_
        complexed with gol, mn, moo, so4
    16. Domains for 3rvs:
      1. 2855737Domain d3rvsa1: 3rvs A:1-129 [216091]
        Other proteins in same PDB: d3rvsa2, d3rvsb2
        automated match to d3rvra_
        complexed with gol, mn, so4, wo4
      2. 2855738Domain d3rvsb1: 3rvs B:1-129 [216092]
        Other proteins in same PDB: d3rvsa2, d3rvsb2
        automated match to d3rvra_
        complexed with gol, mn, so4, wo4
  5. 2855747Escherichia coli [TaxId:1444102] [377849] (1 PDB entry)
  6. 2855749Escherichia coli [TaxId:562] [186909] (5 PDB entries)
    1. Domains for 1zes:
      1. 2855754Domain d1zesa_: 1zes A: [124994]
        automated match to d1b00a_
        complexed with bef, mg
      2. 2855755Domain d1zesb_: 1zes B: [124995]
        automated match to d1b00a_
        complexed with bef, mg
      3. 2855756Domain d1zesc_: 1zes C: [124996]
        automated match to d1b00a_
        complexed with bef, mg
    2. Domains for 2iyn:
      1. 2855759Domain d2iyna_: 2iyn A: [137803]
        automated match to d1b00a_
        complexed with mg
      2. 2855760Domain d2iynb_: 2iyn B: [137804]
        automated match to d1b00a_
        complexed with mg
      3. 2855761Domain d2iync_: 2iyn C: [137805]
        automated match to d1b00a_
        complexed with mg
    3. Domains for 2j8e:
      1. 2855757Domain d2j8ea_: 2j8e A: [304105]
        automated match to d3fgza_
        complexed with bef, gol, mn, nh4
      2. 2855758Domain d2j8eb_: 2j8e B: [304106]
        automated match to d3fgza_
        complexed with bef, gol, mn, nh4
    4. Domains for 2jb9:
      1. 2855752Domain d2jb9a_: 2jb9 A: [165980]
        automated match to d1b00a_
        mutant
      2. 2855753Domain d2jb9b_: 2jb9 B: [165981]
        automated match to d1b00a_
        mutant
    5. Domains for 2jba:
      1. 2855750Domain d2jbaa_: 2jba A: [165982]
        automated match to d1b00a_
        complexed with na, trs; mutant
      2. 2855751Domain d2jbab_: 2jba B: [165983]
        automated match to d1b00a_
        complexed with na, trs; mutant
  7. 2855762Escherichia coli [TaxId:83334] [313252] (3 PDB entries)
    1. Domains for 5d2c:
      1. 2855767Domain d5d2ca_: 5d2c A: [313342]
        automated match to d3ffwa_
        complexed with bef, gol, imd, mn, so4
      2. 2855768Domain d5d2cb_: 5d2c B: [313253]
        automated match to d3ffwa_
        complexed with bef, gol, imd, mn, so4
    2. Domains for 5dgc:
      1. 2855765Domain d5dgca_: 5dgc A: [314507]
        automated match to d3ffwa_
        complexed with bef, cl, gol, imd, mn
      2. 2855766Domain d5dgcb_: 5dgc B: [313600]
        automated match to d3ffwa_
        complexed with bef, cl, gol, imd, mn
    3. Domains for 5dkf:
      1. 2855763Domain d5dkfa_: 5dkf A: [313639]
        automated match to d3ffwa_
        complexed with bef, gol, imd, mn
      2. 2855764Domain d5dkfb_: 5dkf B: [313642]
        automated match to d3ffwa_
        complexed with bef, gol, imd, mn
  8. 2855769Thermotoga maritima [TaxId:243274] [358854] (1 PDB entry)
  9. 2855772Vibrio cholerae [TaxId:666] [194701] (5 PDB entries)
    1. Domain for 3to5:
    2. Domain for 4hnq:
    3. Domain for 4hns:
    4. Domain for 4jp1:
    5. Domain for 4lx8:

More info for Protein automated matches from c.23.1.1: CheY-related

Timeline for Protein automated matches from c.23.1.1: CheY-related: