Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2537906Fold d.126: Pentein, beta/alpha-propeller [55908] (1 superfamily)
    duplication: composed of 5 alpha-beta(2)-alpha-beta units arranged around pseudo fivefold axis
  4. 2537907Superfamily d.126.1: Pentein [55909] (8 families) (S)
  5. 2538050Family d.126.1.0: automated matches [191334] (1 protein)
    not a true family
  6. 2538051Protein automated matches [190175] (10 species)
    not a true protein

Species:

  1. 2538052Campylobacter jejuni [TaxId:192222] [342731] (2 PDB entries)
    1. Domains for 6b10:
      1. 2538053Domain d6b10a1: 6b10 A:1-325 [342744]
        Other proteins in same PDB: d6b10a2, d6b10b2
        automated match to d1zbra1
        complexed with k, po4
      2. 2538054Domain d6b10b1: 6b10 B:1-325 [342732]
        Other proteins in same PDB: d6b10a2, d6b10b2
        automated match to d1zbra1
        complexed with k, po4
    2. Domains for 6b2w:
      1. 2538055Domain d6b2wa1: 6b2w A:1-325 [342766]
        Other proteins in same PDB: d6b2wa2, d6b2wb2
        automated match to d1zbra1
        complexed with ag2, k
      2. 2538056Domain d6b2wb1: 6b2w B:1-325 [342754]
        Other proteins in same PDB: d6b2wa2, d6b2wb2
        automated match to d1zbra1
        complexed with ag2, k
  2. 2538057Cow (Bos taurus) [TaxId:9913] [187514] (7 PDB entries)
    1. Domain for 2c6z:
    2. Domain for 2ci1:
    3. Domain for 2ci3:
    4. Domain for 2ci4:
    5. Domains for 2ci5:
      1. 2538063Domain d2ci5a_: 2ci5 A: [163409]
        automated match to d1h70a_
        complexed with cit, hcs
      2. 2538064Domain d2ci5b_: 2ci5 B: [163410]
        automated match to d1h70a_
        complexed with cit, hcs
    6. Domain for 2ci6:
    7. Domain for 2ci7:
  3. 2538066Erwinia amylovora [TaxId:552] [341718] (1 PDB entry)
  4. 2538069Helicobacter pylori [311190] (1 PDB entry)
  5. 2538071Human (Homo sapiens) [TaxId:9606] [187904] (35 PDB entries)
    1. Domains for 2jai:
      1. 2538077Domain d2jaia_: 2jai A: [165959]
        automated match to d1h70a_
        complexed with cir
      2. 2538078Domain d2jaib_: 2jai B: [165960]
        automated match to d1h70a_
        complexed with cir
    2. Domains for 2jaj:
      1. 2538084Domain d2jaja_: 2jaj A: [165961]
        automated match to d1h70a_
        complexed with d20
      2. 2538085Domain d2jajb_: 2jaj B: [165962]
        automated match to d1h70a_
        complexed with d20
    3. Domains for 3i2e:
      1. 2538095Domain d3i2ea_: 3i2e A: [211443]
        automated match to d2jajb_
      2. 2538096Domain d3i2eb_: 3i2e B: [211444]
        automated match to d2jajb_
    4. Domains for 3i4a:
      1. 2538091Domain d3i4aa_: 3i4a A: [211466]
        automated match to d2jajb_
        complexed with ln5
      2. 2538092Domain d3i4ab_: 3i4a B: [211467]
        automated match to d2jajb_
        complexed with ln5
    5. Domains for 3p8e:
      1. 2538097Domain d3p8ea_: 3p8e A: [214692]
        automated match to d2jajb_
        complexed with ln7
      2. 2538098Domain d3p8eb_: 3p8e B: [214693]
        automated match to d2jajb_
        complexed with ln7
    6. Domains for 3p8p:
      1. 2538100Domain d3p8pa_: 3p8p A: [214697]
        automated match to d2jajb_
        complexed with ln6
      2. 2538101Domain d3p8pb_: 3p8p B: [214698]
        automated match to d2jajb_
        complexed with ln6
    7. Domain for 4n20:
    8. Domain for 4n22:
    9. Domain for 4n24:
    10. Domain for 4n25:
    11. Domain for 4n26:
    12. Domain for 4n28:
    13. Domain for 4n2a:
    14. Domain for 4n2b:
    15. Domain for 4n2c:
    16. Domain for 4n2d:
    17. Domain for 4n2e:
    18. Domain for 4n2f:
    19. Domain for 4n2g:
    20. Domain for 4n2h:
    21. Domain for 4n2i:
    22. Domain for 4n2k:
    23. Domain for 4n2l:
    24. Domain for 4n2m:
    25. Domain for 4n2n:
    26. Domain for 6ce1:
    27. Domain for 6dge:
    28. Domain for 6szp:
    29. Domains for 6szq:
      1. 3078601Domain d6szqa_: 6szq A: [378663]
        Other proteins in same PDB: d6szqd2
        automated match to d2jajb_
      2. 3078602Domain d6szqd1: 6szq D:1-283 [378664]
        Other proteins in same PDB: d6szqd2
        automated match to d2jajb_
      3. 3078604Domain d6szqe_: 6szq E: [378666]
        Other proteins in same PDB: d6szqd2
        automated match to d2jajb_
      4. 3078609Domain d6szqc_: 6szq C: [378671]
        Other proteins in same PDB: d6szqd2
        automated match to d2jajb_
      5. 3078621Domain d6szqf_: 6szq F: [378683]
        Other proteins in same PDB: d6szqd2
        automated match to d2jajb_
      6. 3078631Domain d6szqb_: 6szq B: [378693]
        Other proteins in same PDB: d6szqd2
        automated match to d2jajb_
    30. Domains for 7d4y:
      1. 3104764Domain d7d4yb3: 7d4y B:294-664 [404826]
        Other proteins in same PDB: d7d4ya1, d7d4ya2, d7d4yb1, d7d4yb2
        automated match to d3b1ua3
      2. 3104832Domain d7d4ya3: 7d4y A:294-664 [404894]
        Other proteins in same PDB: d7d4ya1, d7d4ya2, d7d4yb1, d7d4yb2
        automated match to d3b1ua3
    31. Domains for 7d56:
      1. 3104862Domain d7d56b3: 7d56 B:294-664 [404924]
        Other proteins in same PDB: d7d56a1, d7d56a2, d7d56b1, d7d56b2, d7d56c1, d7d56c2
        automated match to d3b1ua3
        complexed with bfb, ca, cl, edo, gol
      2. 3104961Domain d7d56a3: 7d56 A:294-664 [405023]
        Other proteins in same PDB: d7d56a1, d7d56a2, d7d56b1, d7d56b2, d7d56c1, d7d56c2
        automated match to d3b1ua3
        complexed with bfb, ca, cl, edo, gol
      3. 3105010Domain d7d56c3: 7d56 C:294-664 [405072]
        Other proteins in same PDB: d7d56a1, d7d56a2, d7d56b1, d7d56b2, d7d56c1, d7d56c2
        automated match to d3b1ua3
        complexed with bfb, ca, cl, edo, gol
    32. Domains for 7d5r:
      1. 3104866Domain d7d5ra3: 7d5r A:294-664 [404928]
        Other proteins in same PDB: d7d5ra1, d7d5ra2, d7d5rb1, d7d5rb2
        automated match to d3b1ua3
        complexed with ca, cl, gol; mutant
      2. 3104912Domain d7d5rb3: 7d5r B:294-664 [404974]
        Other proteins in same PDB: d7d5ra1, d7d5ra2, d7d5rb1, d7d5rb2
        automated match to d3b1ua3
        complexed with ca, cl, gol; mutant
    33. Domains for 7d5v:
      1. 3104858Domain d7d5va3: 7d5v A:294-664 [404920]
        Other proteins in same PDB: d7d5va1, d7d5va2, d7d5vb1, d7d5vb2
        automated match to d3b1ua3
        complexed with edo, gol; mutant
      2. 3104933Domain d7d5vb3: 7d5v B:294-664 [404995]
        Other proteins in same PDB: d7d5va1, d7d5va2, d7d5vb1, d7d5vb2
        automated match to d3b1ua3
        complexed with edo, gol; mutant
    34. Domains for 7d8n:
      1. 3104979Domain d7d8na3: 7d8n A:294-664 [405041]
        Other proteins in same PDB: d7d8na1, d7d8na2, d7d8nb1, d7d8nb2
        automated match to d3b1ua3
        complexed with ca, cl, gol
      2. 3105156Domain d7d8nb3: 7d8n B:294-664 [405218]
        Other proteins in same PDB: d7d8na1, d7d8na2, d7d8nb1, d7d8nb2
        automated match to d3b1ua3
        complexed with ca, cl, gol
    35. Domains for 7dan:
      1. 3104850Domain d7danc3: 7dan C:294-664 [404912]
        Other proteins in same PDB: d7dana1, d7dana2, d7danb1, d7danb2, d7danc1, d7danc2
        automated match to d3b1ua3
        complexed with ca, cl, edo, gol
      2. 3104871Domain d7danb3: 7dan B:294-664 [404933]
        Other proteins in same PDB: d7dana1, d7dana2, d7danb1, d7danb2, d7danc1, d7danc2
        automated match to d3b1ua3
        complexed with ca, cl, edo, gol
      3. 3104966Domain d7dana3: 7dan A:294-664 [405028]
        Other proteins in same PDB: d7dana1, d7dana2, d7danb1, d7danb2, d7danc1, d7danc2
        automated match to d3b1ua3
        complexed with ca, cl, edo, gol
  6. 2538103Mycoplasma penetrans [TaxId:272633] [226512] (1 PDB entry)
  7. 2538116Porphyromonas gingivalis [TaxId:242619] [186905] (1 PDB entry)
  8. 2538118Streptococcus mutans [TaxId:1309] [187074] (1 PDB entry)
  9. 2538130Streptococcus pyogenes [TaxId:1314] [224940] (1 PDB entry)
  10. 3082363Microseira wollei [TaxId:467598] [382425] (1 PDB entry)

More info for Protein automated matches from d.126.1.0: automated matches

Timeline for Protein automated matches from d.126.1.0: automated matches: