Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2918481Fold c.97: Cytidine deaminase-like [53926] (2 superfamilies)
    core: alpha-beta(2)-(alpha-beta)2; 3 layers (a/b/a); mixed beta-sheet of 4 strands, order 2134; strand 1 is antiparallel to the rest
  4. 2918482Superfamily c.97.1: Cytidine deaminase-like [53927] (7 families) (S)
    contains extra C-terminal strand 5, order 21345
  5. 2918483Family c.97.1.1: Cytidine deaminase [53928] (4 proteins)
    strand 5 is antiparallel to strand 4
  6. 2918531Protein automated matches [190174] (2 species)
    not a true protein

Species:

  1. 2918532Aspergillus terreus [TaxId:33178] [187315] (6 PDB entries)
    1. Domains for 1wn5:
      1. 2918549Domain d1wn5b_: 1wn5 B: [121083]
        Other proteins in same PDB: d1wn5a1
        automated match to d1wn5a1
        complexed with cac, zn
      2. 2918550Domain d1wn5c_: 1wn5 C: [121084]
        Other proteins in same PDB: d1wn5a1
        automated match to d1wn5a1
        complexed with cac, zn
      3. 2918551Domain d1wn5d_: 1wn5 D: [121085]
        Other proteins in same PDB: d1wn5a1
        automated match to d1wn5a1
        complexed with cac, zn
    2. Domains for 1wn6:
      1. 2918552Domain d1wn6a_: 1wn6 A: [121086]
        automated match to d1wn5a1
        complexed with ars, bst, zn
      2. 2918553Domain d1wn6b_: 1wn6 B: [121087]
        automated match to d1wn5a1
        complexed with ars, bst, zn
    3. Domains for 2z3g:
      1. 2918541Domain d2z3ga_: 2z3g A: [153994]
        automated match to d1wn5a1
        complexed with zn
      2. 2918542Domain d2z3gb_: 2z3g B: [153995]
        automated match to d1wn5a1
        complexed with zn
      3. 2918543Domain d2z3gc_: 2z3g C: [153996]
        automated match to d1wn5a1
        complexed with zn
      4. 2918544Domain d2z3gd_: 2z3g D: [153997]
        automated match to d1wn5a1
        complexed with zn
    4. Domains for 2z3h:
      1. 2918533Domain d2z3ha_: 2z3h A: [153998]
        automated match to d1wn5a1
        complexed with blo, zn
      2. 2918534Domain d2z3hb_: 2z3h B: [153999]
        automated match to d1wn5a1
        complexed with blo, zn
      3. 2918535Domain d2z3hc_: 2z3h C: [154000]
        automated match to d1wn5a1
        complexed with blo, zn
      4. 2918536Domain d2z3hd_: 2z3h D: [154001]
        automated match to d1wn5a1
        complexed with blo, zn
    5. Domains for 2z3i:
      1. 2918545Domain d2z3ia_: 2z3i A: [171027]
        automated match to d1wn5a1
        complexed with bls, cac, zn; mutant
      2. 2918546Domain d2z3ib_: 2z3i B: [171028]
        automated match to d1wn5a1
        complexed with bls, cac, zn; mutant
      3. 2918547Domain d2z3ic_: 2z3i C: [171029]
        automated match to d1wn5a1
        complexed with bls, cac, zn; mutant
      4. 2918548Domain d2z3id_: 2z3i D: [171030]
        automated match to d1wn5a1
        complexed with bls, cac, zn; mutant
    6. Domains for 2z3j:
      1. 2918537Domain d2z3ja_: 2z3j A: [171031]
        automated match to d1wn5a1
        complexed with cac, cl, zn; mutant
      2. 2918538Domain d2z3jb_: 2z3j B: [171032]
        automated match to d1wn5a1
        complexed with cac, cl, zn; mutant
      3. 2918539Domain d2z3jc_: 2z3j C: [171033]
        automated match to d1wn5a1
        complexed with cac, cl, zn; mutant
      4. 2918540Domain d2z3jd_: 2z3j D: [171034]
        automated match to d1wn5a1
        complexed with cac, cl, zn; mutant
  2. 2918554Mouse (Mus musculus) [TaxId:10090] [186904] (3 PDB entries)
    1. Domains for 1zab:
      1. 2918559Domain d1zabb_: 1zab B: [124819]
        Other proteins in same PDB: d1zaba1
        automated match to d1mq0a_
        complexed with so4, urd, zn
      2. 2918560Domain d1zabc_: 1zab C: [124820]
        Other proteins in same PDB: d1zaba1
        automated match to d1mq0a_
        complexed with so4, urd, zn
      3. 2918561Domain d1zabd_: 1zab D: [124821]
        Other proteins in same PDB: d1zaba1
        automated match to d1mq0a_
        complexed with so4, urd, zn
    2. Domains for 2fr5:
      1. 2918555Domain d2fr5a_: 2fr5 A: [133965]
        automated match to d1mq0a_
        protein/RNA complex; complexed with so4, tyu, zn
      2. 2918556Domain d2fr5b_: 2fr5 B: [133966]
        automated match to d1mq0a_
        protein/RNA complex; complexed with so4, tyu, zn
      3. 2918557Domain d2fr5c_: 2fr5 C: [133967]
        automated match to d1mq0a_
        protein/RNA complex; complexed with so4, tyu, zn
      4. 2918558Domain d2fr5d_: 2fr5 D: [133968]
        automated match to d1mq0a_
        protein/RNA complex; complexed with so4, tyu, zn
    3. Domains for 2fr6:
      1. 2918562Domain d2fr6a_: 2fr6 A: [133969]
        automated match to d1mq0a_
        complexed with ctn, nh3, so4, uri, zn
      2. 2918563Domain d2fr6b_: 2fr6 B: [133970]
        automated match to d1mq0a_
        complexed with ctn, nh3, so4, uri, zn
      3. 2918564Domain d2fr6c_: 2fr6 C: [133971]
        automated match to d1mq0a_
        complexed with ctn, nh3, so4, uri, zn
      4. 2918565Domain d2fr6d_: 2fr6 D: [133972]
        automated match to d1mq0a_
        complexed with ctn, nh3, so4, uri, zn

More info for Protein automated matches from c.97.1.1: Cytidine deaminase

Timeline for Protein automated matches from c.97.1.1: Cytidine deaminase: