SCOPe 2.01: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.01
Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
the first seven superfamilies have similar phosphate-binding sites

Superfamily c.1.7: NAD(P)-linked oxidoreductase [51430] (2 families)
Family c.1.7.1: Aldo-keto reductases (NADP) [51431] (16 proteins)
Common fold covers whole protein structure
Protein automated matches [190169] (3 species)
not a true protein

Species:

Human (Homo sapiens) [TaxId:9606] [188399] (33 PDB entries)
1. Domain for 1z3n:
  - Domain d1z3na_: 1z3n A: [124411]
    automated match to d1el3a_
    complexed with 3na, ndp
2. Domain for 1z89:
  - Domain d1z89a_: 1z89 A: [124695]
    automated match to d1pwla_
    complexed with 62p, nap
3. Domain for 1z8a:
  - Domain d1z8aa_: 1z8a A: [124696]
    automated match to d1pwla_
    complexed with 62p, nap
4. Domain for 1zua:
  - Domain d1zuax_: 1zua X: [162586]
    automated match to d1c9wa_
    complexed with nap, tol
5. Domain for 2dux:
  - Domain d2duxa_: 2dux A: [131753]
    automated match to d1pwla_
    complexed with nap, zst
6. Domain for 2duz:
  - Domain d2duza_: 2duz A: [131754]
    automated match to d1pwla_
    complexed with nap, zst
7. Domain for 2dv0:
  - Domain d2dv0a_: 2dv0 A: [131755]
    automated match to d1pwla_
    complexed with nap, zst
8. Domains for 2fvl:
  1. Domain d2fvla_: 2fvl A: [164478]
    automated match to d1mrqa_
    complexed with nap
  2. Domain d2fvlb_: 2fvl B: [164479]
    automated match to d1mrqa_
    complexed with nap
  3. Domain d2fvlc_: 2fvl C: [164480]
    automated match to d1mrqa_
    complexed with nap
9. Domain for 2hv5:
  - Domain d2hv5a_: 2hv5 A: [136783]
    automated match to d1pwla_
    complexed with nap, zst
10. Domain for 2hvn:
  - Domain d2hvna_: 2hvn A: [136814]
    automated match to d1pwla_
    complexed with nap, zst
11. Domain for 2hvo:
  - Domain d2hvoa_: 2hvo A: [136815]
    automated match to d1pwla_
    complexed with nap, zst
12. Domain for 2i16:
  - Domain d2i16a_: 2i16 A: [136978]
    automated match to d1pwla_
    complexed with cit, ldt, ndp
13. Domain for 2i17:
  - Domain d2i17a_: 2i17 A: [136979]
    automated match to d1pwla_
    complexed with cit, ldt, ndp
14. Domain for 2ikg:
  - Domain d2ikga_: 2ikg A: [137488]
    automated match to d1pwla_
    complexed with bto, nap
15. Domain for 2ikh:
  - Domain d2ikha_: 2ikh A: [137489]
    automated match to d1pwla_
    complexed with lit, nap
16. Domain for 2iki:
  - Domain d2ikia_: 2iki A: [137490]
    automated match to d1pwla_
    complexed with 388, nap
17. Domain for 2ikj:
  - Domain d2ikja_: 2ikj A: [137491]
    automated match to d1pwla_
    complexed with 393, nap
18. Domain for 2j8t:
  - Domain d2j8ta_: 2j8t A: [138142]
    automated match to d1pwla_
    complexed with flc, nap
19. Domain for 2nvc:
  - Domain d2nvca_: 2nvc A: [138628]
    automated match to d1pwla_
    complexed with ita, nap
20. Domain for 2nvd:
  - Domain d2nvda_: 2nvd A: [138629]
    automated match to d1pwla_
    complexed with itb, nap
21. Domain for 2qxw:
  - Domain d2qxwa_: 2qxw A: [151466]
    automated match to d1el3a_
    complexed with cit, ldt, ndp
22. Domain for 2r24:
  - Domain d2r24a_: 2r24 A: [167929]
    automated match to d1el3a_
    complexed with ldt, nap
23. Domain for 3bcj:
  - Domain d3bcja_: 3bcj A: [155127]
    automated match to d1el3a_
    complexed with cit, fis, nap
24. Domains for 3bur:
  1. Domain d3bura_: 3bur A: [172829]
    automated match to d1q13a_
    complexed with gol, nap, tes
  2. Domain d3burb_: 3bur B: [172830]
    automated match to d1q13a_
    complexed with gol, nap, tes
25. Domains for 3buv:
  1. Domain d3buva_: 3buv A: [172831]
    automated match to d1q13a_
    complexed with epe, gol, nap
  2. Domain d3buvb_: 3buv B: [172832]
    automated match to d1q13a_
    complexed with epe, gol, nap
26. Domains for 3bv7:
  1. Domain d3bv7a_: 3bv7 A: [172833]
    automated match to d1q13a_
    complexed with gol, nap
  2. Domain d3bv7b_: 3bv7 B: [172834]
    automated match to d1q13a_
    complexed with gol, nap
27. Domain for 3c3u:
  - Domain d3c3ua_: 3c3u A: [155923]
    automated match to d1j96a_
    complexed with c2u, nap, zn
28. Domains for 3caq:
  1. Domain d3caqa_: 3caq A: [173104]
    automated match to d1q13a_
    complexed with bme, edo, mpd, ndp
  2. Domain d3caqb_: 3caq B: [173105]
    automated match to d1q13a_
    complexed with bme, edo, mpd, ndp
29. Domains for 3cas:
  1. Domain d3casa_: 3cas A: [173106]
    automated match to d1q13a_
    complexed with asd, bme, edo, nap
  2. Domain d3casb_: 3cas B: [173107]
    automated match to d1q13a_
    complexed with asd, bme, edo, nap
30. Domains for 3cav:
  1. Domain d3cava_: 3cav A: [173108]
    automated match to d1q13a_
    complexed with bme, ci2, edo, nap
  2. Domain d3cavb_: 3cav B: [173109]
    automated match to d1q13a_
    complexed with bme, ci2, edo, nap
31. Domain for 3gug:
  - Domain d3guga_: 3gug A: [177007]
    automated match to d1j96a_
    complexed with c2u, nap, zn; mutant
32. Domain for 3nty:
  - Domain d3ntya_: 3nty A: [182541]
    automated match to d1j96a_
    complexed with 5p3, nap, zn
33. Domain for 3u2c:
  - Domain d3u2ca_: 3u2c A: [186064]
    automated match to d1el3a_
    complexed with cit, nap, peg, pg4, pg5, suz
Mouse (Mus musculus) [TaxId:10090] [187524] (10 PDB entries)
1. Domains for 2c91:
  1. Domain d2c91a_: 2c91 A: [163324]
    automated match to d1gvea_
    complexed with gol, mes, nap, po4, tla
  2. Domain d2c91b_: 2c91 B: [163325]
    automated match to d1gvea_
    complexed with gol, mes, nap, po4, tla
  3. Domain d2c91c_: 2c91 C: [163326]
    automated match to d1gvea_
    complexed with gol, mes, nap, po4, tla
  4. Domain d2c91d_: 2c91 D: [163327]
    automated match to d1gvea_
    complexed with gol, mes, nap, po4, tla
  5. Domain d2c91e_: 2c91 E: [163328]
    automated match to d1gvea_
    complexed with gol, mes, nap, po4, tla
  6. Domain d2c91f_: 2c91 F: [163329]
    automated match to d1gvea_
    complexed with gol, mes, nap, po4, tla
  7. Domain d2c91g_: 2c91 G: [163330]
    automated match to d1gvea_
    complexed with gol, mes, nap, po4, tla
  8. Domain d2c91h_: 2c91 H: [163331]
    automated match to d1gvea_
    complexed with gol, mes, nap, po4, tla
  9. Domain d2c91i_: 2c91 I: [163332]
    automated match to d1gvea_
    complexed with gol, mes, nap, po4, tla
  10. Domain d2c91j_: 2c91 J: [163333]
    automated match to d1gvea_
    complexed with gol, mes, nap, po4, tla
2. Domains for 2he5:
  1. Domain d2he5a_: 2he5 A: [165064]
    automated match to d1mrqa_
    complexed with act, bme, ndp
  2. Domain d2he5b_: 2he5 B: [165065]
    automated match to d1mrqa_
    complexed with act, bme, ndp
  3. Domain d2he5c_: 2he5 C: [165066]
    automated match to d1mrqa_
    complexed with act, bme, ndp
  4. Domain d2he5d_: 2he5 D: [165067]
    automated match to d1mrqa_
    complexed with act, bme, ndp
3. Domains for 2he8:
  1. Domain d2he8a_: 2he8 A: [165068]
    automated match to d1mrqa_
    complexed with act, bme, gol
  2. Domain d2he8b_: 2he8 B: [165069]
    automated match to d1mrqa_
    complexed with act, bme, gol
4. Domains for 2hej:
  1. Domain d2heja_: 2hej A: [165072]
    automated match to d1mrqa_
    complexed with bme, edo, mpd, ndp
  2. Domain d2hejb_: 2hej B: [165073]
    automated match to d1mrqa_
    complexed with bme, edo, mpd, ndp
5. Domains for 2ipf:
  1. Domain d2ipfa_: 2ipf A: [165630]
    automated match to d1mrqa_
    complexed with bme, edo, ffa, nap, trs
  2. Domain d2ipfb_: 2ipf B: [165631]
    automated match to d1mrqa_
    complexed with bme, edo, ffa, nap, trs
6. Domains for 2ipg:
  1. Domain d2ipga_: 2ipg A: [165632]
    automated match to d1j96a_
    complexed with bme, edo, ffa, nap; mutant
  2. Domain d2ipgb_: 2ipg B: [165633]
    automated match to d1j96a_
    complexed with bme, edo, ffa, nap; mutant
7. Domains for 2p5n:
  1. Domain d2p5na_: 2p5n A: [167014]
    automated match to d1mrqa_
    complexed with mpd, nap
  2. Domain d2p5nb_: 2p5n B: [167015]
    automated match to d1mrqa_
    complexed with mpd, nap
8. Domains for 3cv6:
  1. Domain d3cv6a_: 3cv6 A: [173489]
    automated match to d1j96a_
    complexed with bme, hxs, nap; mutant
  2. Domain d3cv6b_: 3cv6 B: [173490]
    automated match to d1j96a_
    complexed with bme, hxs, nap; mutant
9. Domains for 3fjn:
  1. Domain d3fjna_: 3fjn A: [175841]
    automated match to d1mrqa_
    complexed with act; mutant
  2. Domain d3fjnb_: 3fjn B: [175842]
    automated match to d1mrqa_
    complexed with act; mutant
10. Domain for 3ln3:
  - Domain d3ln3a_: 3ln3 A: [180406]
    automated match to d1mrqa_
    complexed with mrd, nad, so4
Norway rat (Rattus norvegicus) [TaxId:10116] [186935] (2 PDB entries)
1. Domains for 3lnm:
  1. Domain d3lnma_: 3lnm A: [180415]
    automated match to d1exba_
    complexed with k, nap, pgw; mutant
  2. Domain d3lnmc_: 3lnm C: [180416]
    automated match to d1exba_
    complexed with k, nap, pgw; mutant
2. Domains for 3o3r:
  1. Domain d3o3ra_: 3o3r A: [182782]
    automated match to d1frba_
    complexed with nap
  2. Domain d3o3rb_: 3o3r B: [182783]
    automated match to d1frba_
    complexed with nap

More info for Protein automated matches from c.1.7.1: Aldo-keto reductases (NADP)

Timeline for Protein automated matches from c.1.7.1: Aldo-keto reductases (NADP):

Protein automated matches from c.1.7.1: Aldo-keto reductases (NADP) is new in SCOPe 2.01-stable
Protein automated matches from c.1.7.1: Aldo-keto reductases (NADP) appears in SCOPe 2.02
Protein automated matches from c.1.7.1: Aldo-keto reductases (NADP) appears in the current release, SCOPe 2.08