Lineage for Protein: automated matches

  1. Root: SCOPe 2.05
  2. 1886641Class d: Alpha and beta proteins (a+b) [53931] (381 folds)
  3. 1941821Fold d.172: gp120 core [56501] (1 superfamily)
    unusual fold
  4. 1941822Superfamily d.172.1: gp120 core [56502] (1 family) (S)
  5. 1941823Family d.172.1.1: gp120 core [56503] (2 proteins)
  6. 1941849Protein automated matches [190166] (2 species)
    not a true protein

Species:

  1. 1941850Human immunodeficiency virus 1 [TaxId:11676] [186893] (4 PDB entries)
    1. Domains for 1yyl:
      1. 1941854Domain d1yylg_: 1yyl G: [124222]
        Other proteins in same PDB: d1yylh1, d1yylh2, d1yyll1, d1yyll2, d1yylm1, d1yylq1, d1yylq2, d1yylr1, d1yylr2, d1yyls1
        automated match to d1g9ng_
        complexed with nag, ndg
      2. 1941855Domain d1yylp_: 1yyl P: [124227]
        Other proteins in same PDB: d1yylh1, d1yylh2, d1yyll1, d1yyll2, d1yylm1, d1yylq1, d1yylq2, d1yylr1, d1yylr2, d1yyls1
        automated match to d1g9ng_
        complexed with nag, ndg
    2. Domains for 1yym:
      1. 1941851Domain d1yymg_: 1yym G: [124232]
        Other proteins in same PDB: d1yymh1, d1yymh2, d1yyml1, d1yyml2, d1yymm1, d1yymq1, d1yymq2, d1yymr1, d1yymr2, d1yyms1
        automated match to d1g9ng_
        complexed with edo, ipa, nag, ndg
      2. 1941852Domain d1yymp_: 1yym P: [124237]
        Other proteins in same PDB: d1yymh1, d1yymh2, d1yyml1, d1yyml2, d1yymm1, d1yymq1, d1yymq2, d1yymr1, d1yymr2, d1yyms1
        automated match to d1g9ng_
        complexed with edo, ipa, nag, ndg
    3. Domain for 2ny7:
    4. Domain for 4jm2:
  2. 1941857Human immunodeficiency virus type 1 (isolate yu2) [TaxId:362651] [193960] (1 PDB entry)

More info for Protein automated matches from d.172.1.1: gp120 core

Timeline for Protein automated matches from d.172.1.1: gp120 core: