SCOPe 2.08: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.08
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
Fold c.108: HAD-like [56783] (1 superfamily)
3 layers: a/b/a; parallel beta-sheet of 6 strands, order 321456
Superfamily c.108.1: HAD-like [56784] (26 families)
usually contains an insertion (sub)domain after strand 1

Family c.108.1.14: NagD-like [102317] (7 proteins)
duplication: consists of two segment-swapped domains of this fold; this results in the insertion of a circularly permuted domain after strand 3, analogously to the Cof family

Protein automated matches [190164] (2 species)
not a true protein

Species:

Enterococcus faecalis [TaxId:226185] [186889] (1 PDB entry)
- Domain for 1yv9:
  - Domain d1yv9b2: 1yv9 B:4-256 [124090]
    Other proteins in same PDB: d1yv9a1, d1yv9a2, d1yv9a3, d1yv9b3, d1yv9b4
    automated match to d1wvia_
    complexed with po4
Streptococcus agalactiae [TaxId:216466] [188652] (1 PDB entry)
- Domain for 3epr:
  - Domain d3epra1: 3epr A:4-258 [175145]
    Other proteins in same PDB: d3epra2, d3epra3
    automated match to d1ys9a1
    complexed with gol, na

More info for Protein automated matches from c.108.1.14: NagD-like

Timeline for Protein automated matches from c.108.1.14: NagD-like:

Protein automated matches from c.108.1.14: NagD-like first appeared in SCOPe 2.01
Protein automated matches from c.108.1.14: NagD-like appears in SCOPe 2.07