Species:

1. Coxiella burnetii [TaxId:777] [196134] (1 PDB entry)

   • Domains for 3tr8:

     1. Domain d3tr8a_: 3tr8 A: [200862] automated match to d3tr8b_ complexed with act, mg, mn

     2. Domain d3tr8b_: 3tr8 B: [196135] automated match to d2igia_ complexed with act, mg, mn

2. Escherichia coli K-12 [TaxId:83333] [225829] (2 PDB entries)

   1. Domains for 2is3:

      1. Domain d2is3a_: 2is3 A: [242171] automated match to d2f96a1 complexed with so4

      2. Domain d2is3b_: 2is3 B: [242172] automated match to d2f96a1 complexed with so4

      3. Domain d2is3c_: 2is3 C: [242173] automated match to d2f96a1 complexed with so4

      4. Domain d2is3d_: 2is3 D: [242174] automated match to d2f96a1 complexed with so4

   2. Domains for 3k5o:

      1. Domain d3k5oa1: 3k5o A:2-389 [212170] Other proteins in same PDB: d3k5oa2, d3k5ob2 automated match to d1q8ia1

      2. Domain d3k5ob1: 3k5o B:2-389 [212172] Other proteins in same PDB: d3k5oa2, d3k5ob2 automated match to d1q8ia1

3. Escherichia coli [TaxId:562] [187263] (13 PDB entries)

   1. Domain for 2gui:

      • Domain d2guia_: 2gui A: [135737] automated match to d1j53a_ complexed with edo, mn, peg, u5p

   2. Domains for 2ido:

      1. Domain d2idoa_: 2ido A: [137284] Other proteins in same PDB: d2idob_, d2idod_ automated match to d1j53a_ complexed with edo, mn, tmp

      2. Domain d2idoc_: 2ido C: [137286] Other proteins in same PDB: d2idob_, d2idod_ automated match to d1j53a_ complexed with edo, mn, tmp

   3. Domain for 2xy8:

      • Domain d2xy8a_: 2xy8 A: [244620] Other proteins in same PDB: d2xy8b_ automated match to d2guia_ protein/DNA complex; complexed with ca

   4. Domain for 3c94:

      • Domain d3c94a_: 3c94 A: [156120] automated match to d1fxxa_ protein/DNA complex; complexed with mg

   5. Domain for 3c95:

      • Domain d3c95a_: 3c95 A: [156121] automated match to d1fxxa_ complexed with mg

   6. Domain for 3k5l:

      • Domain d3k5la1: 3k5l A:-2-389 [212166] Other proteins in same PDB: d3k5la2 automated match to d1q8ia1 protein/DNA complex; complexed with dtp, mg

   7. Domain for 3k5m:

      • Domain d3k5ma1: 3k5m A:-1-389 [212168] Other proteins in same PDB: d3k5ma2 automated match to d1q8ia1 protein/DNA complex; complexed with ca, dg3

   8. Domains for 3k5n:

      1. Domain d3k5na1: 3k5n A:1-389 [247113] Other proteins in same PDB: d3k5na2, d3k5nb2 automated match to d1q8ia1 protein/DNA complex

      2. Domain d3k5nb1: 3k5n B:0-389 [247115] Other proteins in same PDB: d3k5na2, d3k5nb2 automated match to d1q8ia1 protein/DNA complex

   9. Domains for 3ngy:

      1. Domain d3ngya_: 3ngy A: [247917] automated match to d2f96a1 complexed with co; mutant

      2. Domain d3ngyb_: 3ngy B: [247918] automated match to d2f96a1 complexed with co; mutant

      3. Domain d3ngyc_: 3ngy C: [247919] automated match to d2f96a1 complexed with co; mutant

      4. Domain d3ngyd_: 3ngy D: [247920] automated match to d2f96a1 complexed with co; mutant

   10. Domains for 3ngz:

       1. Domain d3ngza_: 3ngz A: [247921] automated match to d2f96a1 protein/DNA complex; protein/RNA complex; complexed with co, mg

       2. Domain d3ngzb_: 3ngz B: [247922] automated match to d2f96a1 protein/DNA complex; protein/RNA complex; complexed with co, mg

   11. Domains for 3nh0:

       1. Domain d3nh0a_: 3nh0 A: [247923] automated match to d2f96a1 protein/DNA complex; protein/RNA complex

       2. Domain d3nh0b_: 3nh0 B: [247924] automated match to d2f96a1 protein/DNA complex; protein/RNA complex

   12. Domains for 3nh1:

       1. Domain d3nh1a_: 3nh1 A: [247925] automated match to d2f96a1 protein/DNA complex; protein/RNA complex; complexed with mg

       2. Domain d3nh1b_: 3nh1 B: [247926] automated match to d2f96a1 protein/DNA complex; protein/RNA complex; complexed with mg

       3. Domain d3nh1c_: 3nh1 C: [247927] automated match to d2f96a1 protein/DNA complex; protein/RNA complex; complexed with mg

       4. Domain d3nh1d_: 3nh1 D: [247928] automated match to d2f96a1 protein/DNA complex; protein/RNA complex; complexed with mg

   13. Domains for 3nh2:

       1. Domain d3nh2a_: 3nh2 A: [247929] automated match to d2f96a1 protein/DNA complex; protein/RNA complex

       2. Domain d3nh2b_: 3nh2 B: [247930] automated match to d2f96a1 protein/DNA complex; protein/RNA complex

       3. Domain d3nh2e_: 3nh2 E: [247931] automated match to d2f96a1 protein/DNA complex; protein/RNA complex

       4. Domain d3nh2f_: 3nh2 F: [247932] automated match to d2f96a1 protein/DNA complex; protein/RNA complex

4. Thermococcus gorgonarius [TaxId:71997] [225933] (3 PDB entries)
   1. Domain for 2vwj:

      • Domain d2vwja1: 2vwj A:1-347 [153675] Other proteins in same PDB: d2vwja2 automated match to d1tgoa1 complexed with k

   2. Domain for 2vwk:

      • Domain d2vwka1: 2vwk A:1-347 [153677] Other proteins in same PDB: d2vwka2 automated match to d1tgoa1 complexed with na, so4

   3. Domain for 2xhb:

      • Domain d2xhba1: 2xhb A:1-347 [207252] Other proteins in same PDB: d2xhba2 automated match to d1qqca1 protein/DNA complex; complexed with na

More info for Protein automated matches from c.55.3.5: DnaQ-like 3'-5' exonuclease

Timeline for Protein automated matches from c.55.3.5: DnaQ-like 3'-5' exonuclease:

• Protein automated matches from c.55.3.5: DnaQ-like 3'-5' exonuclease first appeared in SCOPe 2.01
  
• Protein automated matches from c.55.3.5: DnaQ-like 3'-5' exonuclease appears in SCOPe 2.03
  
• Protein automated matches from c.55.3.5: DnaQ-like 3'-5' exonuclease appears in SCOPe 2.05
  
• Protein automated matches from c.55.3.5: DnaQ-like 3'-5' exonuclease appears in the current release, SCOPe 2.08