| Class c: Alpha and beta proteins (a/b) [51349] (147 folds) |
| Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies) 3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest |
Superfamily c.55.3: Ribonuclease H-like [53098] (15 families) ![]() consists of one domain of this fold |
| Family c.55.3.5: DnaQ-like 3'-5' exonuclease [53118] (16 proteins) contains Pfam PF00929 |
| Protein automated matches [190162] (4 species) not a true protein |
| Coxiella burnetii [TaxId:777] [196134] (1 PDB entry) |
| Domain d3tr8a_: 3tr8 A: [200862] automated match to d3tr8b_ complexed with act, mg, mn |
| Domain d3tr8b_: 3tr8 B: [196135] automated match to d2igia_ complexed with act, mg, mn |
| Escherichia coli [TaxId:562] [187263] (6 PDB entries) |
| Domain d2guia_: 2gui A: [135737] automated match to d1j53a_ complexed with edo, mn, peg, u5p |
| Domain d2idoa_: 2ido A: [137284] Other proteins in same PDB: d2idob_, d2idod_ automated match to d1j53a_ complexed with edo, mn, tmp |
| Domain d2idoc_: 2ido C: [137286] Other proteins in same PDB: d2idob_, d2idod_ automated match to d1j53a_ complexed with edo, mn, tmp |
| Domain d3c94a_: 3c94 A: [156120] automated match to d1fxxa_ protein/DNA complex; complexed with mg |
| Domain d3c95a_: 3c95 A: [156121] automated match to d1fxxa_ complexed with mg |
| Domain d3k5la1: 3k5l A:-2-389 [212166] Other proteins in same PDB: d3k5la2 automated match to d1q8ia1 protein/DNA complex; complexed with dtp, mg |
| Domain d3k5ma1: 3k5m A:-1-389 [212168] Other proteins in same PDB: d3k5ma2 automated match to d1q8ia1 protein/DNA complex; complexed with ca, dg3 |
| Escherichia coli [TaxId:83333] [225829] (1 PDB entry) |
| Domain d3k5oa1: 3k5o A:2-389 [212170] Other proteins in same PDB: d3k5oa2, d3k5ob2 automated match to d1q8ia1 |
| Domain d3k5ob1: 3k5o B:2-389 [212172] Other proteins in same PDB: d3k5oa2, d3k5ob2 automated match to d1q8ia1 |
| Thermococcus gorgonarius [TaxId:71997] [225933] (1 PDB entry) |
| Domain d2xhba1: 2xhb A:1-347 [207252] Other proteins in same PDB: d2xhba2 automated match to d1qqca1 protein/DNA complex; complexed with na |
Timeline for Protein automated matches from c.55.3.5: DnaQ-like 3'-5' exonuclease: