Species:

1. Colwellia psychrerythraea [TaxId:167879] [365713] (3 PDB entries)

   1. Domain for 6a4a:

      • Domain d6a4aa_: 6a4a A: [365775] automated match to d2igia_ complexed with mg

   2. Domains for 6a4d:

      1. Domain d6a4da1: 6a4d A:1-181 [365834] Other proteins in same PDB: d6a4da2, d6a4db2 automated match to d2igia_ complexed with 9rc

      2. Domain d6a4db1: 6a4d B:1-181 [365911] Other proteins in same PDB: d6a4da2, d6a4db2 automated match to d2igia_ complexed with 9rc

   3. Domains for 6a4f:

      1. Domain d6a4fa1: 6a4f A:1-181 [365915] Other proteins in same PDB: d6a4fa2, d6a4fb2 automated match to d2igia_ complexed with mn, u5p

      2. Domain d6a4fb1: 6a4f B:1-181 [365714] Other proteins in same PDB: d6a4fa2, d6a4fb2 automated match to d2igia_ complexed with mn, u5p

2. Coxiella burnetii [TaxId:777] [196134] (1 PDB entry)

   • Domains for 3tr8:

     1. Domain d3tr8a1: 3tr8 A:1-181 [200862] Other proteins in same PDB: d3tr8a2, d3tr8b2 automated match to d3tr8b_ complexed with act, mg, mn

     2. Domain d3tr8b1: 3tr8 B:1-181 [196135] Other proteins in same PDB: d3tr8a2, d3tr8b2 automated match to d2igia_ complexed with act, mg, mn

3. Escherichia coli K-12 [TaxId:83333] [225829] (2 PDB entries)

   1. Domains for 2is3:

      1. Domain d2is3a_: 2is3 A: [242171] automated match to d2f96a1 complexed with so4

      2. Domain d2is3b_: 2is3 B: [242172] automated match to d2f96a1 complexed with so4

      3. Domain d2is3c_: 2is3 C: [242173] automated match to d2f96a1 complexed with so4

      4. Domain d2is3d_: 2is3 D: [242174] automated match to d2f96a1 complexed with so4

   2. Domains for 3k5o:

      1. Domain d3k5oa1: 3k5o A:2-389 [212170] Other proteins in same PDB: d3k5oa2, d3k5ob2 automated match to d1q8ia1

      2. Domain d3k5ob1: 3k5o B:2-389 [212172] Other proteins in same PDB: d3k5oa2, d3k5ob2 automated match to d1q8ia1

4. Escherichia coli [TaxId:562] [187263] (14 PDB entries)

   1. Domain for 2gui:

      • Domain d2guia_: 2gui A: [135737] automated match to d1j53a_ complexed with edo, mn, peg, u5p

   2. Domains for 2ido:

      1. Domain d2idoa_: 2ido A: [137284] Other proteins in same PDB: d2idob_, d2idod_ automated match to d1j53a_ complexed with edo, mn, tmp

      2. Domain d2idoc_: 2ido C: [137286] Other proteins in same PDB: d2idob_, d2idod_ automated match to d1j53a_ complexed with edo, mn, tmp

   3. Domain for 2xy8:

      • Domain d2xy8a_: 2xy8 A: [244620] Other proteins in same PDB: d2xy8b_ automated match to d2guia_ protein/DNA complex; complexed with ca

   4. Domain for 3c94:

      • Domain d3c94a2: 3c94 A:7-475 [156120] Other proteins in same PDB: d3c94a3 automated match to d1fxxa_ protein/DNA complex; complexed with mg

   5. Domain for 3c95:

      • Domain d3c95a2: 3c95 A:7-475 [156121] Other proteins in same PDB: d3c95a3 automated match to d1fxxa_ complexed with mg

   6. Domain for 3k5l:

      • Domain d3k5la1: 3k5l A:1-389 [212166] Other proteins in same PDB: d3k5la2, d3k5la3 automated match to d1q8ia1 protein/DNA complex; complexed with dtp, mg

   7. Domain for 3k5m:

      • Domain d3k5ma1: 3k5m A:1-389 [212168] Other proteins in same PDB: d3k5ma2, d3k5ma3 automated match to d1q8ia1 protein/DNA complex; complexed with ca, dg3

   8. Domains for 3k5n:

      1. Domain d3k5na1: 3k5n A:1-389 [247113] Other proteins in same PDB: d3k5na2, d3k5nb2, d3k5nb3 automated match to d1q8ia1 protein/DNA complex

      2. Domain d3k5nb1: 3k5n B:1-389 [247115] Other proteins in same PDB: d3k5na2, d3k5nb2, d3k5nb3 automated match to d1q8ia1 protein/DNA complex

   9. Domains for 3ngy:

      1. Domain d3ngya_: 3ngy A: [247917] automated match to d2f96a1 complexed with co; mutant

      2. Domain d3ngyb_: 3ngy B: [247918] automated match to d2f96a1 complexed with co; mutant

      3. Domain d3ngyc_: 3ngy C: [247919] automated match to d2f96a1 complexed with co; mutant

      4. Domain d3ngyd_: 3ngy D: [247920] automated match to d2f96a1 complexed with co; mutant

   10. Domains for 3ngz:

       1. Domain d3ngza_: 3ngz A: [247921] automated match to d2f96a1 protein/DNA complex; protein/RNA complex; complexed with co, mg

       2. Domain d3ngzb_: 3ngz B: [247922] automated match to d2f96a1 protein/DNA complex; protein/RNA complex; complexed with co, mg

   11. Domains for 3nh0:

       1. Domain d3nh0a_: 3nh0 A: [247923] automated match to d2f96a1 protein/DNA complex; protein/RNA complex

       2. Domain d3nh0b_: 3nh0 B: [247924] automated match to d2f96a1 protein/DNA complex; protein/RNA complex

   12. Domains for 3nh1:

       1. Domain d3nh1a_: 3nh1 A: [247925] automated match to d2f96a1 protein/DNA complex; protein/RNA complex; complexed with mg

       2. Domain d3nh1b_: 3nh1 B: [247926] automated match to d2f96a1 protein/DNA complex; protein/RNA complex; complexed with mg

       3. Domain d3nh1c_: 3nh1 C: [247927] automated match to d2f96a1 protein/DNA complex; protein/RNA complex; complexed with mg

       4. Domain d3nh1d_: 3nh1 D: [247928] automated match to d2f96a1 protein/DNA complex; protein/RNA complex; complexed with mg

   13. Domains for 3nh2:

       1. Domain d3nh2a_: 3nh2 A: [247929] automated match to d2f96a1 protein/DNA complex; protein/RNA complex

       2. Domain d3nh2b_: 3nh2 B: [247930] automated match to d2f96a1 protein/DNA complex; protein/RNA complex

       3. Domain d3nh2e_: 3nh2 E: [247931] automated match to d2f96a1 protein/DNA complex; protein/RNA complex

       4. Domain d3nh2f_: 3nh2 F: [247932] automated match to d2f96a1 protein/DNA complex; protein/RNA complex

   14. Domain for 4kb1:

       • Domain d4kb1b_: 4kb1 B: [266544] automated match to d3nh1a_ protein/DNA complex; complexed with mg

5. Escherichia coli [TaxId:83333] [267960] (3 PDB entries)

   1. Domain for 4kaz:

      • Domain d4kaza_: 4kaz A: [266540] automated match to d3nh1a_ protein/DNA complex; complexed with mg

   2. Domains for 4kb0:

      1. Domain d4kb0a_: 4kb0 A: [266541] automated match to d3nh1a_ protein/DNA complex; complexed with mg

      2. Domain d4kb0b_: 4kb0 B: [266542] automated match to d3nh1a_ protein/DNA complex; complexed with mg

   3. Domain for 4kb1:

      • Domain d4kb1a_: 4kb1 A: [266543] automated match to d3nh1a_ protein/DNA complex; complexed with mg

6. Thermococcus gorgonarius [TaxId:71997] [225933] (6 PDB entries)

   1. Domain for 2vwj:

      • Domain d2vwja1: 2vwj A:1-347 [153675] Other proteins in same PDB: d2vwja2 automated match to d1tgoa1 complexed with k

   2. Domain for 2vwk:

      • Domain d2vwka1: 2vwk A:1-347 [153677] Other proteins in same PDB: d2vwka2 automated match to d1tgoa1 complexed with na, so4

   3. Domain for 2xhb:

      • Domain d2xhba1: 2xhb A:1-347 [207252] Other proteins in same PDB: d2xhba2 automated match to d1qqca1 protein/DNA complex; complexed with na

   4. Domain for 7b06:

      • Domain d7b06a1: 7b06 A:1-347 [396826] Other proteins in same PDB: d7b06a2 automated match to d1tgoa1

   5. Domain for 7b07:

      • Domain d7b07a1: 7b07 A:1-347 [396836] Other proteins in same PDB: d7b07a2 automated match to d1tgoa1 complexed with ca

   6. Domain for 7b08:

      • Domain d7b08a1: 7b08 A:1-347 [396846] Other proteins in same PDB: d7b08a2 automated match to d1tgoa1 complexed with pge, ttp

More info for Protein automated matches from c.55.3.5: DnaQ-like 3'-5' exonuclease

Timeline for Protein automated matches from c.55.3.5: DnaQ-like 3'-5' exonuclease:

• Protein automated matches from c.55.3.5: DnaQ-like 3'-5' exonuclease first appeared in SCOPe 2.01
  
• Protein automated matches from c.55.3.5: DnaQ-like 3'-5' exonuclease appears in SCOPe 2.07