Lineage for Protein: automated matches

  1. Root: SCOPe 2.02
  2. 1190016Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
  3. 1226319Fold d.169: C-type lectin-like [56435] (1 superfamily)
    unusual fold
  4. 1226320Superfamily d.169.1: C-type lectin-like [56436] (9 families) (S)
  5. 1226945Family d.169.1.0: automated matches [191331] (1 protein)
    not a true family
  6. 1226946Protein automated matches [190159] (5 species)
    not a true protein

Species:

  1. 1226947Clupea harengus [TaxId:7950] [187340] (1 PDB entry)
  2. 1226954Cucumaria echinata [TaxId:40245] [189610] (2 PDB entries)
    1. Domain for 3alt:
    2. Domains for 3alu:
      1. 1226955Domain d3alua_: 3alu A: [191693]
        automated match to d3alud_
        complexed with ca, edo, raf
      2. 1226956Domain d3alub_: 3alu B: [191694]
        automated match to d3alud_
        complexed with ca, edo, raf
      3. 1226957Domain d3aluc_: 3alu C: [191695]
        automated match to d3alud_
        complexed with ca, edo, raf
      4. 1226958Domain d3alud_: 3alu D: [172237]
        automated match to d1wmya_
        complexed with ca, edo, raf
  3. 1226960Daboia russellii [TaxId:343250] [188295] (1 PDB entry)
  4. 1226963Human (Homo sapiens) [TaxId:9606] [186882] (17 PDB entries)
    1. Domain for 1ypq:
    2. Domains for 1ypu:
      1. 1226996Domain d1ypua_: 1ypu A: [123835]
        automated match to d1hyra_
      2. 1226997Domain d1ypub_: 1ypu B: [123836]
        automated match to d1hyra_
    3. Domains for 1yxj:
      1. 1226991Domain d1yxja_: 1yxj A: [124187]
        automated match to d1hyra_
        complexed with edo
      2. 1226992Domain d1yxjb_: 1yxj B: [124188]
        automated match to d1hyra_
        complexed with edo
    4. Domains for 1yxk:
      1. 1227000Domain d1yxka_: 1yxk A: [124189]
        automated match to d1hyra_
      2. 1227001Domain d1yxkb_: 1yxk B: [124190]
        automated match to d1hyra_
    5. Domain for 2c6u:
    6. Domains for 2ox8:
      1. 1227002Domain d2ox8a_: 2ox8 A: [166892]
        automated match to d1dv8a_
        complexed with ca, cl, zn
      2. 1227003Domain d2ox8b_: 2ox8 B: [166893]
        automated match to d1dv8a_
        complexed with ca, cl, zn
      3. 1227004Domain d2ox8c_: 2ox8 C: [166894]
        automated match to d1dv8a_
        complexed with ca, cl, zn
      4. 1227005Domain d2ox8d_: 2ox8 D: [166895]
        automated match to d1dv8a_
        complexed with ca, cl, zn
    7. Domain for 2yhf:
    8. Domains for 3ff7:
      1. 1226993Domain d3ff7c_: 3ff7 C: [175742]
        Other proteins in same PDB: d3ff7a_, d3ff7b_
        automated match to d1k9jb_
        complexed with acy
      2. 1226994Domain d3ff7d_: 3ff7 D: [175743]
        Other proteins in same PDB: d3ff7a_, d3ff7b_
        automated match to d1k9jb_
        complexed with acy
    9. Domain for 3kqg:
    10. Domains for 3p5d:
      1. 1226983Domain d3p5da_: 3p5d A: [183513]
        automated match to d1k9jb_
        complexed with ca, man
      2. 1226984Domain d3p5db_: 3p5d B: [183514]
        automated match to d1k9jb_
        complexed with ca, man
      3. 1226985Domain d3p5dc_: 3p5d C: [183515]
        automated match to d1k9jb_
        complexed with ca, man
      4. 1226986Domain d3p5dd_: 3p5d D: [183516]
        automated match to d1k9jb_
        complexed with ca, man
    11. Domains for 3p5e:
      1. 1226974Domain d3p5ea_: 3p5e A: [183517]
        automated match to d1k9jb_
        complexed with ca, man
      2. 1226975Domain d3p5eb_: 3p5e B: [183518]
        automated match to d1k9jb_
        complexed with ca, man
      3. 1226976Domain d3p5ec_: 3p5e C: [183519]
        automated match to d1k9jb_
        complexed with ca, man
      4. 1226977Domain d3p5ed_: 3p5e D: [183520]
        automated match to d1k9jb_
        complexed with ca, man
    12. Domains for 3p5f:
      1. 1226979Domain d3p5fa_: 3p5f A: [183521]
        automated match to d1k9jb_
        complexed with ca, man
      2. 1226980Domain d3p5fb_: 3p5f B: [183522]
        automated match to d1k9jb_
        complexed with ca, man
      3. 1226981Domain d3p5fc_: 3p5f C: [183523]
        automated match to d1k9jb_
        complexed with ca, man
      4. 1226982Domain d3p5fd_: 3p5f D: [183524]
        automated match to d1k9jb_
        complexed with ca, man
    13. Domains for 3p5g:
      1. 1226966Domain d3p5ga_: 3p5g A: [183525]
        automated match to d1k9jb_
        complexed with ca, fuc
      2. 1226967Domain d3p5gb_: 3p5g B: [183526]
        automated match to d1k9jb_
        complexed with ca, fuc
      3. 1226968Domain d3p5gc_: 3p5g C: [183527]
        automated match to d1k9jb_
        complexed with ca, fuc
      4. 1226969Domain d3p5gd_: 3p5g D: [183528]
        automated match to d1k9jb_
        complexed with ca, fuc
    14. Domains for 3p5h:
      1. 1226970Domain d3p5ha_: 3p5h A: [183529]
        automated match to d1k9jb_
        complexed with bgc, ca
      2. 1226971Domain d3p5hb_: 3p5h B: [183530]
        automated match to d1k9jb_
        complexed with bgc, ca
      3. 1226972Domain d3p5hc_: 3p5h C: [183531]
        automated match to d1k9jb_
        complexed with bgc, ca
      4. 1226973Domain d3p5hd_: 3p5h D: [183532]
        automated match to d1k9jb_
        complexed with bgc, ca
    15. Domains for 3p5i:
      1. 1226987Domain d3p5ia_: 3p5i A: [183533]
        automated match to d1k9jb_
        complexed with ca
      2. 1226988Domain d3p5ib_: 3p5i B: [183534]
        automated match to d1k9jb_
        complexed with ca
      3. 1226989Domain d3p5ic_: 3p5i C: [183535]
        automated match to d1k9jb_
        complexed with ca
      4. 1226990Domain d3p5id_: 3p5i D: [183536]
        automated match to d1k9jb_
        complexed with ca
    16. Domain for 3vlg:
    17. Domain for 3vpp:
  5. 1227006Mouse (Mus musculus) [TaxId:10090] [187331] (10 PDB entries)
    1. Domains for 2bpd:
      1. 1227007Domain d2bpda_: 2bpd A: [163138]
        automated match to d1ypqa1
      2. 1227008Domain d2bpdb_: 2bpd B: [163139]
        automated match to d1ypqa1
    2. Domains for 2bpe:
      1. 1227021Domain d2bpea_: 2bpe A: [163140]
        automated match to d1ypqa1
        complexed with ca, cl, pg4
      2. 1227022Domain d2bpeb_: 2bpe B: [163141]
        automated match to d1ypqa1
        complexed with ca, cl, pg4
    3. Domains for 2bph:
      1. 1227019Domain d2bpha_: 2bph A: [163142]
        automated match to d1ypqa1
        complexed with mg
      2. 1227020Domain d2bphb_: 2bph B: [163143]
        automated match to d1ypqa1
        complexed with mg
    4. Domains for 2cl8:
      1. 1227025Domain d2cl8a_: 2cl8 A: [163439]
        automated match to d1ypqa1
        complexed with ca, cl
      2. 1227026Domain d2cl8b_: 2cl8 B: [163440]
        automated match to d1ypqa1
        complexed with ca, cl
    5. Domains for 2ox9:
      1. 1227013Domain d2ox9a_: 2ox9 A: [166896]
        automated match to d1t8ca1
        complexed with ca
      2. 1227014Domain d2ox9b_: 2ox9 B: [166897]
        automated match to d1t8ca1
        complexed with ca
      3. 1227015Domain d2ox9c_: 2ox9 C: [166898]
        automated match to d1t8ca1
        complexed with ca
      4. 1227016Domain d2ox9d_: 2ox9 D: [166899]
        automated match to d1t8ca1
        complexed with ca
    6. Domains for 3ff8:
      1. 1227017Domain d3ff8c_: 3ff8 C: [175746]
        Other proteins in same PDB: d3ff8a_, d3ff8b_
        automated match to d1b6ea_
        complexed with ca
      2. 1227018Domain d3ff8d_: 3ff8 D: [175747]
        Other proteins in same PDB: d3ff8a_, d3ff8b_
        automated match to d1b6ea_
        complexed with ca
    7. Domains for 3ff9:
      1. 1227010Domain d3ff9a_: 3ff9 A: [175748]
        automated match to d1b6ea_
      2. 1227011Domain d3ff9b_: 3ff9 B: [175749]
        automated match to d1b6ea_
    8. Domain for 3m9z:
    9. Domain for 3rs1:
    10. Domains for 3t3a:
      1. 1227023Domain d3t3aa_: 3t3a A: [185632]
        automated match to d1ypoa1
        complexed with po4; mutant
      2. 1227024Domain d3t3ab_: 3t3a B: [185633]
        automated match to d1ypoa1
        complexed with po4; mutant

More info for Protein automated matches from d.169.1.0: automated matches

Timeline for Protein automated matches from d.169.1.0: automated matches: