Lineage for Protein: automated matches

  1. Root: SCOPe 2.01
  2. 1013083Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
  3. 1048063Fold d.169: C-type lectin-like [56435] (1 superfamily)
    unusual fold
  4. 1048064Superfamily d.169.1: C-type lectin-like [56436] (9 families) (S)
  5. 1048685Family d.169.1.0: automated matches [191331] (1 protein)
    not a true family
  6. 1048686Protein automated matches [190159] (5 species)
    not a true protein

Species:

  1. 1048687Clupea harengus [TaxId:7950] [187340] (1 PDB entry)
  2. 1048694Cucumaria echinata [TaxId:40245] [189610] (1 PDB entry)
  3. 1048696Daboia russellii [TaxId:343250] [188295] (1 PDB entry)
  4. 1048699Human (Homo sapiens) [TaxId:9606] [186882] (14 PDB entries)
    1. Domain for 1ypq:
    2. Domains for 1ypu:
      1. 1048730Domain d1ypua_: 1ypu A: [123835]
        automated match to d1hyra_
      2. 1048731Domain d1ypub_: 1ypu B: [123836]
        automated match to d1hyra_
    3. Domains for 1yxj:
      1. 1048726Domain d1yxja_: 1yxj A: [124187]
        automated match to d1hyra_
        complexed with edo
      2. 1048727Domain d1yxjb_: 1yxj B: [124188]
        automated match to d1hyra_
        complexed with edo
    4. Domains for 1yxk:
      1. 1048733Domain d1yxka_: 1yxk A: [124189]
        automated match to d1hyra_
      2. 1048734Domain d1yxkb_: 1yxk B: [124190]
        automated match to d1hyra_
    5. Domain for 2c6u:
    6. Domains for 2ox8:
      1. 1048735Domain d2ox8a_: 2ox8 A: [166892]
        automated match to d1dv8a_
        complexed with ca, cl, zn
      2. 1048736Domain d2ox8b_: 2ox8 B: [166893]
        automated match to d1dv8a_
        complexed with ca, cl, zn
      3. 1048737Domain d2ox8c_: 2ox8 C: [166894]
        automated match to d1dv8a_
        complexed with ca, cl, zn
      4. 1048738Domain d2ox8d_: 2ox8 D: [166895]
        automated match to d1dv8a_
        complexed with ca, cl, zn
    7. Domains for 3ff7:
      1. 1048728Domain d3ff7c_: 3ff7 C: [175742]
        Other proteins in same PDB: d3ff7a_, d3ff7b_
        automated match to d1k9jb_
        complexed with acy
      2. 1048729Domain d3ff7d_: 3ff7 D: [175743]
        Other proteins in same PDB: d3ff7a_, d3ff7b_
        automated match to d1k9jb_
        complexed with acy
    8. Domain for 3kqg:
    9. Domains for 3p5d:
      1. 1048718Domain d3p5da_: 3p5d A: [183513]
        automated match to d1k9jb_
        complexed with ca, man
      2. 1048719Domain d3p5db_: 3p5d B: [183514]
        automated match to d1k9jb_
        complexed with ca, man
      3. 1048720Domain d3p5dc_: 3p5d C: [183515]
        automated match to d1k9jb_
        complexed with ca, man
      4. 1048721Domain d3p5dd_: 3p5d D: [183516]
        automated match to d1k9jb_
        complexed with ca, man
    10. Domains for 3p5e:
      1. 1048710Domain d3p5ea_: 3p5e A: [183517]
        automated match to d1k9jb_
        complexed with ca, man
      2. 1048711Domain d3p5eb_: 3p5e B: [183518]
        automated match to d1k9jb_
        complexed with ca, man
      3. 1048712Domain d3p5ec_: 3p5e C: [183519]
        automated match to d1k9jb_
        complexed with ca, man
      4. 1048713Domain d3p5ed_: 3p5e D: [183520]
        automated match to d1k9jb_
        complexed with ca, man
    11. Domains for 3p5f:
      1. 1048714Domain d3p5fa_: 3p5f A: [183521]
        automated match to d1k9jb_
        complexed with ca, man
      2. 1048715Domain d3p5fb_: 3p5f B: [183522]
        automated match to d1k9jb_
        complexed with ca, man
      3. 1048716Domain d3p5fc_: 3p5f C: [183523]
        automated match to d1k9jb_
        complexed with ca, man
      4. 1048717Domain d3p5fd_: 3p5f D: [183524]
        automated match to d1k9jb_
        complexed with ca, man
    12. Domains for 3p5g:
      1. 1048702Domain d3p5ga_: 3p5g A: [183525]
        automated match to d1k9jb_
        complexed with ca, fuc
      2. 1048703Domain d3p5gb_: 3p5g B: [183526]
        automated match to d1k9jb_
        complexed with ca, fuc
      3. 1048704Domain d3p5gc_: 3p5g C: [183527]
        automated match to d1k9jb_
        complexed with ca, fuc
      4. 1048705Domain d3p5gd_: 3p5g D: [183528]
        automated match to d1k9jb_
        complexed with ca, fuc
    13. Domains for 3p5h:
      1. 1048706Domain d3p5ha_: 3p5h A: [183529]
        automated match to d1k9jb_
        complexed with bgc, ca
      2. 1048707Domain d3p5hb_: 3p5h B: [183530]
        automated match to d1k9jb_
        complexed with bgc, ca
      3. 1048708Domain d3p5hc_: 3p5h C: [183531]
        automated match to d1k9jb_
        complexed with bgc, ca
      4. 1048709Domain d3p5hd_: 3p5h D: [183532]
        automated match to d1k9jb_
        complexed with bgc, ca
    14. Domains for 3p5i:
      1. 1048722Domain d3p5ia_: 3p5i A: [183533]
        automated match to d1k9jb_
        complexed with ca
      2. 1048723Domain d3p5ib_: 3p5i B: [183534]
        automated match to d1k9jb_
        complexed with ca
      3. 1048724Domain d3p5ic_: 3p5i C: [183535]
        automated match to d1k9jb_
        complexed with ca
      4. 1048725Domain d3p5id_: 3p5i D: [183536]
        automated match to d1k9jb_
        complexed with ca
  5. 1048739Mouse (Mus musculus) [TaxId:10090] [187331] (9 PDB entries)
    1. Domains for 2bpd:
      1. 1048740Domain d2bpda_: 2bpd A: [163138]
        automated match to d1ypqa1
      2. 1048741Domain d2bpdb_: 2bpd B: [163139]
        automated match to d1ypqa1
    2. Domains for 2bpe:
      1. 1048753Domain d2bpea_: 2bpe A: [163140]
        automated match to d1ypqa1
        complexed with ca, cl, pg4
      2. 1048754Domain d2bpeb_: 2bpe B: [163141]
        automated match to d1ypqa1
        complexed with ca, cl, pg4
    3. Domains for 2bph:
      1. 1048751Domain d2bpha_: 2bph A: [163142]
        automated match to d1ypqa1
        complexed with mg
      2. 1048752Domain d2bphb_: 2bph B: [163143]
        automated match to d1ypqa1
        complexed with mg
    4. Domains for 2cl8:
      1. 1048755Domain d2cl8a_: 2cl8 A: [163439]
        automated match to d1ypqa1
        complexed with ca, cl
      2. 1048756Domain d2cl8b_: 2cl8 B: [163440]
        automated match to d1ypqa1
        complexed with ca, cl
    5. Domains for 2ox9:
      1. 1048745Domain d2ox9a_: 2ox9 A: [166896]
        automated match to d1t8ca1
        complexed with ca
      2. 1048746Domain d2ox9b_: 2ox9 B: [166897]
        automated match to d1t8ca1
        complexed with ca
      3. 1048747Domain d2ox9c_: 2ox9 C: [166898]
        automated match to d1t8ca1
        complexed with ca
      4. 1048748Domain d2ox9d_: 2ox9 D: [166899]
        automated match to d1t8ca1
        complexed with ca
    6. Domains for 3ff8:
      1. 1048749Domain d3ff8c_: 3ff8 C: [175746]
        Other proteins in same PDB: d3ff8a_, d3ff8b_
        automated match to d1b6ea_
        complexed with ca
      2. 1048750Domain d3ff8d_: 3ff8 D: [175747]
        Other proteins in same PDB: d3ff8a_, d3ff8b_
        automated match to d1b6ea_
        complexed with ca
    7. Domains for 3ff9:
      1. 1048743Domain d3ff9a_: 3ff9 A: [175748]
        automated match to d1b6ea_
      2. 1048744Domain d3ff9b_: 3ff9 B: [175749]
        automated match to d1b6ea_
    8. Domain for 3m9z:
    9. Domains for 3t3a:
      1. 1048757Domain d3t3aa_: 3t3a A: [185632]
        automated match to d1ypoa1
        complexed with po4; mutant
      2. 1048758Domain d3t3ab_: 3t3a B: [185633]
        automated match to d1ypoa1
        complexed with po4; mutant

More info for Protein automated matches from d.169.1.0: automated matches

Timeline for Protein automated matches from d.169.1.0: automated matches: