Lineage for Protein: automated matches

  1. Root: SCOPe 2.01
  2. 968085Class c: Alpha and beta proteins (a/b) [51349] (147 folds)
  3. 982187Fold c.23: Flavodoxin-like [52171] (15 superfamilies)
    3 layers, a/b/a; parallel beta-sheet of 5 strand, order 21345
  4. 982673Superfamily c.23.5: Flavoproteins [52218] (9 families) (S)
  5. 983081Family c.23.5.0: automated matches [191330] (1 protein)
    not a true family
  6. 983082Protein automated matches [190158] (5 species)
    not a true protein

Species:

  1. 983083Azotobacter vinelandii [TaxId:354] [186881] (1 PDB entry)
  2. 983085Desulfovibrio desulfuricans [TaxId:525146] [189135] (2 PDB entries)
    1. Domain for 3kap:
    2. Domain for 3kaq:
  3. 983088Desulfovibrio desulfuricans [TaxId:876] [188896] (3 PDB entries)
    1. Domains for 3f6r:
      1. 983089Domain d3f6ra_: 3f6r A: [175514]
        automated match to d1j9ea_
        complexed with fmn
      2. 983090Domain d3f6rb_: 3f6r B: [175515]
        automated match to d1j9ea_
        complexed with fmn
      3. 983091Domain d3f6rc_: 3f6r C: [175516]
        automated match to d1j9ea_
        complexed with fmn
      4. 983092Domain d3f6rd_: 3f6r D: [175517]
        automated match to d1j9ea_
        complexed with fmn
    2. Domains for 3f6s:
      1. 983093Domain d3f6sa_: 3f6s A: [175518]
        automated match to d1j9ea_
        complexed with fmn
      2. 983094Domain d3f6sb_: 3f6s B: [175519]
        automated match to d1j9ea_
        complexed with fmn
      3. 983095Domain d3f6sd_: 3f6s D: [175520]
        automated match to d1j9ea_
        complexed with fmn
      4. 983096Domain d3f6se_: 3f6s E: [175521]
        automated match to d1j9ea_
        complexed with fmn
      5. 983097Domain d3f6sf_: 3f6s F: [175522]
        automated match to d1j9ea_
        complexed with fmn
      6. 983098Domain d3f6sg_: 3f6s G: [175523]
        automated match to d1j9ea_
        complexed with fmn
      7. 983099Domain d3f6sh_: 3f6s H: [175524]
        automated match to d1j9ea_
        complexed with fmn
      8. 983100Domain d3f6si_: 3f6s I: [175525]
        automated match to d1j9ea_
        complexed with fmn
    3. Domains for 3f90:
      1. 983101Domain d3f90a_: 3f90 A: [175579]
        automated match to d1j9ea_
        complexed with fmn
      2. 983102Domain d3f90b_: 3f90 B: [175580]
        automated match to d1j9ea_
        complexed with fmn
      3. 983103Domain d3f90d_: 3f90 D: [175581]
        automated match to d1j9ea_
        complexed with fmn
      4. 983104Domain d3f90e_: 3f90 E: [175582]
        automated match to d1j9ea_
        complexed with fmn
      5. 983105Domain d3f90f_: 3f90 F: [175583]
        automated match to d1j9ea_
        complexed with fmn
      6. 983106Domain d3f90g_: 3f90 G: [175584]
        automated match to d1j9ea_
        complexed with fmn
      7. 983107Domain d3f90h_: 3f90 H: [175585]
        automated match to d1j9ea_
        complexed with fmn
      8. 983108Domain d3f90i_: 3f90 I: [175586]
        automated match to d1j9ea_
        complexed with fmn
  4. 983109Escherichia coli K-12 [TaxId:83333] [188285] (4 PDB entries)
    1. Domains for 3b6i:
      1. 983110Domain d3b6ia_: 3b6i A: [172434]
        automated match to d1zwka1
        complexed with 15p, fmn
      2. 983111Domain d3b6ib_: 3b6i B: [172435]
        automated match to d1zwka1
        complexed with 15p, fmn
    2. Domains for 3b6j:
      1. 983114Domain d3b6ja_: 3b6j A: [172436]
        automated match to d1zwka1
        complexed with 15p, amp, fmn, nad
      2. 983115Domain d3b6jb_: 3b6j B: [172437]
        automated match to d1zwka1
        complexed with 15p, amp, fmn, nad
    3. Domains for 3b6k:
      1. 983116Domain d3b6ka_: 3b6k A: [172438]
        automated match to d1zwka1
        complexed with 15p, fmn, plq
      2. 983117Domain d3b6kb_: 3b6k B: [172439]
        automated match to d1zwka1
        complexed with 15p, fmn, plq
    4. Domains for 3b6m:
      1. 983112Domain d3b6ma_: 3b6m A: [172440]
        automated match to d1zwka1
        complexed with 144, 15p, fmn
      2. 983113Domain d3b6mb_: 3b6m B: [172441]
        automated match to d1zwka1
        complexed with 144, 15p, fmn
  5. 983118Sulfolobus tokodaii [TaxId:111955] [188428] (1 PDB entry)

More info for Protein automated matches from c.23.5.0: automated matches

Timeline for Protein automated matches from c.23.5.0: automated matches: