Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2058814Fold b.50: Acid proteases [50629] (1 superfamily)
    barrel, closed; n=6, S=10, complex topology
  4. 2058815Superfamily b.50.1: Acid proteases [50630] (4 families) (S)
  5. 2060177Family b.50.1.2: Pepsin-like [50646] (11 protein domains)
    duplication: consists of two similar barrel domains
    N-terminal: barrel, partly opened; n*=6, S*=10
  6. 2060948Protein automated matches [190156] (4 species)
    not a true protein

Species:

  1. 2060949Camel (Camelus dromedarius) [TaxId:9838] [197076] (1 PDB entry)
  2. 2060951Cryphonectria parasitica [TaxId:5116] [187236] (22 PDB entries)
    1. Domain for 2jji:
    2. Domain for 2jjj:
    3. Domain for 2v00:
    4. Domain for 2vs2:
    5. Domain for 3lzy:
    6. Domain for 3pb5:
    7. Domain for 3pbd:
    8. Domain for 3pbz:
    9. Domain for 3pcw:
    10. Domain for 3pcz:
    11. Domain for 3pgi:
    12. Domain for 3pi0:
    13. Domain for 3pld:
    14. Domain for 3pll:
    15. Domain for 3pm4:
    16. Domain for 3pmu:
    17. Domain for 3pmy:
    18. Domain for 3prs:
    19. Domain for 3psy:
    20. Domain for 3pww:
    21. Domain for 3q6y:
    22. Domain for 5hct:
  3. 2060973Human (Homo sapiens) [TaxId:9606] [187237] (38 PDB entries)
    1. Domain for 1tzs:
    2. Domains for 1ym2:
      1. 2060994Domain d1ym2a_: 1ym2 A: [123679]
        automated match to d1fkna_
      2. 2060995Domain d1ym2b_: 1ym2 B: [123680]
        automated match to d1fkna_
      3. 2060996Domain d1ym2c_: 1ym2 C: [123681]
        automated match to d1fkna_
    3. Domains for 1ym4:
      1. 2061005Domain d1ym4a_: 1ym4 A: [123682]
        automated match to d1fkna_
      2. 2061006Domain d1ym4b_: 1ym4 B: [123683]
        automated match to d1fkna_
      3. 2061007Domain d1ym4c_: 1ym4 C: [123684]
        automated match to d1fkna_
    4. Domain for 2va5:
    5. Domain for 2va6:
    6. Domain for 2va7:
    7. Domain for 2vie:
    8. Domain for 2vij:
    9. Domain for 2viy:
    10. Domain for 2viz:
    11. Domain for 2vj6:
    12. Domain for 2vj7:
    13. Domain for 2vj9:
    14. Domain for 2vnm:
    15. Domain for 2vnn:
    16. Domain for 2wez:
    17. Domain for 2wf0:
    18. Domain for 2wf1:
    19. Domain for 2wf2:
    20. Domain for 2wf3:
    21. Domain for 2wf4:
    22. Domain for 2wjo:
    23. Domain for 2xfi:
    24. Domain for 2xfj:
    25. Domain for 2xfk:
    26. Domain for 3bra:
    27. Domain for 3buf:
    28. Domain for 3bug:
    29. Domain for 3buh:
    30. Domains for 3ckp:
      1. 2061008Domain d3ckpa_: 3ckp A: [156740]
        automated match to d1fkna_
        complexed with 012, cl
      2. 2061009Domain d3ckpb_: 3ckp B: [156741]
        automated match to d1fkna_
        complexed with 012, cl
      3. 2061010Domain d3ckpc_: 3ckp C: [156742]
        automated match to d1fkna_
        complexed with 012, cl
    31. Domains for 3ckr:
      1. 2061021Domain d3ckra_: 3ckr A: [156743]
        automated match to d1fkna_
        complexed with 009
      2. 2061022Domain d3ckrb_: 3ckr B: [156744]
        automated match to d1fkna_
        complexed with 009
      3. 2061023Domain d3ckrc_: 3ckr C: [156745]
        automated match to d1fkna_
        complexed with 009
    32. Domains for 3dm6:
      1. 2061017Domain d3dm6a_: 3dm6 A: [174053]
        automated match to d1fkna_
        complexed with 757, ipa
      2. 2061018Domain d3dm6b_: 3dm6 B: [174054]
        automated match to d1fkna_
        complexed with 757, ipa
      3. 2061019Domain d3dm6c_: 3dm6 C: [174055]
        automated match to d1fkna_
        complexed with 757, ipa
    33. Domains for 3h0b:
      1. 2061014Domain d3h0ba_: 3h0b A: [177127]
        automated match to d1fkna_
        complexed with b35
      2. 2061015Domain d3h0bb_: 3h0b B: [177128]
        automated match to d1fkna_
        complexed with b35
      3. 2061016Domain d3h0bc_: 3h0b C: [177129]
        automated match to d1fkna_
        complexed with b35
    34. Domain for 3zmg:
    35. Domain for 3zov:
    36. Domain for 4b1c:
    37. Domain for 4bek:
    38. Domain for 4bfd:
  4. 2061024Yeast (Candida albicans) [TaxId:5476] [188488] (4 PDB entries)
    1. Domain for 2h6s:
    2. Domain for 2h6t:
    3. Domains for 2qzw:
      1. 2061025Domain d2qzwa_: 2qzw A: [167895]
        automated match to d1eaga_
      2. 2061026Domain d2qzwb_: 2qzw B: [167896]
        automated match to d1eaga_
    4. Domains for 2qzx:
      1. 2061029Domain d2qzxa_: 2qzx A: [167897]
        automated match to d1eaga_
      2. 2061030Domain d2qzxb_: 2qzx B: [167898]
        automated match to d1eaga_

More info for Protein automated matches from b.50.1.2: Pepsin-like

Timeline for Protein automated matches from b.50.1.2: Pepsin-like: