Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2391025Fold b.50: Acid proteases [50629] (1 superfamily)
    barrel, closed; n=6, S=10, complex topology
  4. 2391026Superfamily b.50.1: Acid proteases [50630] (4 families) (S)
  5. 2392462Family b.50.1.2: Pepsin-like [50646] (11 proteins)
    duplication: consists of two similar barrel domains
    N-terminal: barrel, partly opened; n*=6, S*=10
  6. 2393721Protein automated matches [190156] (5 species)
    not a true protein

Species:

  1. 2393722Camel (Camelus dromedarius) [TaxId:9838] [197076] (1 PDB entry)
  2. 2393724Cryphonectria parasitica [TaxId:5116] [187236] (191 PDB entries)
    1. Domain for 2jji:
    2. Domain for 2jjj:
    3. Domain for 2v00:
    4. Domain for 2vs2:
    5. Domain for 3lzy:
    6. Domain for 3pb5:
    7. Domain for 3pbd:
    8. Domain for 3pbz:
    9. Domain for 3pcw:
    10. Domain for 3pcz:
    11. Domain for 3pgi:
    12. Domain for 3pi0:
    13. Domain for 3pld:
    14. Domain for 3pll:
    15. Domain for 3pm4:
    16. Domain for 3pmu:
    17. Domain for 3pmy:
    18. Domain for 3prs:
    19. Domain for 3psy:
    20. Domain for 3pww:
    21. Domain for 3q6y:
    22. Domain for 5hct:
    23. Domain for 5r1t:
    24. Domain for 5r1u:
    25. Domain for 5r1v:
    26. Domain for 5r1w:
    27. Domain for 5r1x:
    28. Domain for 5r1y:
    29. Domain for 5r1z:
    30. Domain for 5r20:
    31. Domain for 5r21:
    32. Domain for 5r22:
    33. Domain for 5r23:
    34. Domain for 5r24:
    35. Domain for 5r25:
    36. Domain for 5r26:
    37. Domain for 5r27:
    38. Domain for 5r28:
    39. Domain for 5r29:
    40. Domain for 5r2a:
    41. Domain for 5r2b:
    42. Domain for 5r2c:
    43. Domain for 5r2d:
    44. Domain for 5r2e:
    45. Domain for 5r2f:
    46. Domain for 5r2g:
    47. Domain for 5r2h:
    48. Domain for 5r2i:
    49. Domain for 5r2j:
    50. Domain for 5r2k:
    51. Domain for 5r2l:
    52. Domain for 5r2m:
    53. Domain for 5r2n:
    54. Domain for 5r2o:
    55. Domain for 5r2p:
    56. Domain for 5r2q:
    57. Domain for 5r2r:
    58. Domain for 5r2s:
    59. Domain for 5r2t:
    60. Domain for 5r2u:
    61. Domain for 5r2v:
    62. Domain for 5r2w:
    63. Domain for 5r2x:
    64. Domain for 5r2y:
    65. Domain for 5r2z:
    66. Domain for 5r30:
    67. Domain for 5r31:
    68. Domain for 5r32:
    69. Domain for 5r33:
    70. Domain for 5r34:
    71. Domain for 5r35:
    72. Domain for 5r36:
    73. Domain for 5r37:
    74. Domain for 5r38:
    75. Domain for 5r39:
    76. Domain for 5r3a:
    77. Domain for 5r3b:
    78. Domain for 5r3c:
    79. Domain for 5r3d:
    80. Domain for 5r3e:
    81. Domain for 5r3f:
    82. Domain for 5r3g:
    83. Domain for 5r3h:
    84. Domain for 5r3i:
    85. Domain for 5r3j:
    86. Domain for 5r3k:
    87. Domain for 5r3l:
    88. Domain for 5r3m:
    89. Domain for 5r3n:
    90. Domain for 5r3o:
    91. Domain for 5r3p:
    92. Domain for 5r3q:
    93. Domain for 5r3r:
    94. Domain for 5r3s:
    95. Domain for 5r3t:
    96. Domain for 5r3u:
    97. Domain for 5r3v:
    98. Domain for 5r3w:
    99. Domain for 5r3x:
    100. Domain for 5r3y:
    101. Domain for 5r3z:
    102. Domain for 5r40:
    103. Domain for 5r41:
    104. Domain for 5rbo:
    105. Domain for 5rbp:
    106. Domain for 5rbq:
    107. Domain for 5rbr:
    108. Domain for 5rbs:
    109. Domain for 5rbt:
    110. Domain for 5rbu:
    111. Domain for 5rbv:
    112. Domain for 5rbw:
    113. Domain for 5rbx:
    114. Domain for 5rby:
    115. Domain for 5rbz:
    116. Domain for 5rc0:
    117. Domain for 5rc1:
    118. Domain for 5rc2:
    119. Domain for 5rc3:
    120. Domain for 5rc4:
    121. Domain for 5rc5:
    122. Domain for 5rc6:
    123. Domain for 5rc7:
    124. Domain for 5rc8:
    125. Domain for 5rc9:
    126. Domain for 5rca:
    127. Domain for 5rcb:
    128. Domain for 5rcc:
    129. Domain for 5rcd:
    130. Domain for 5rce:
    131. Domain for 5rcf:
    132. Domain for 5rcg:
    133. Domain for 5rch:
    134. Domain for 5rci:
    135. Domain for 5rcj:
    136. Domain for 5rck:
    137. Domain for 5rcl:
    138. Domain for 5rcm:
    139. Domain for 5rcn:
    140. Domain for 5rco:
    141. Domain for 5rcp:
    142. Domain for 5rcq:
    143. Domain for 5rcr:
    144. Domain for 5rcs:
    145. Domain for 5rct:
    146. Domain for 5rcu:
    147. Domain for 5rcv:
    148. Domain for 5rcw:
    149. Domain for 5rcx:
    150. Domain for 5rcy:
    151. Domain for 5rcz:
    152. Domain for 5rd0:
    153. Domain for 5rd1:
    154. Domain for 5rd2:
    155. Domain for 5rd3:
    156. Domain for 5rd4:
    157. Domain for 5rd5:
    158. Domain for 5rd6:
    159. Domain for 5rd7:
    160. Domain for 5rd8:
    161. Domain for 5rd9:
    162. Domain for 5rda:
    163. Domain for 5rdb:
    164. Domain for 5rdc:
    165. Domain for 5rdd:
    166. Domain for 5rde:
    167. Domain for 5rdf:
    168. Domain for 5rdg:
    169. Domain for 5rdh:
    170. Domain for 5rdi:
    171. Domain for 5rdj:
    172. Domain for 5rdk:
    173. Domain for 5rdl:
    174. Domain for 5rdm:
    175. Domain for 5rdn:
    176. Domain for 5rdo:
    177. Domain for 5rdp:
    178. Domain for 5rdq:
    179. Domain for 5rdr:
    180. Domain for 5rds:
    181. Domain for 5rdt:
    182. Domain for 5rdu:
    183. Domain for 5rdv:
    184. Domain for 5rdw:
    185. Domain for 5rdx:
    186. Domain for 5rdy:
    187. Domain for 5rdz:
    188. Domain for 5re0:
    189. Domain for 5re1:
    190. Domain for 5re2:
    191. Domain for 5re3:
  3. 2393747Human (Homo sapiens) [TaxId:9606] [187237] (38 PDB entries)
    1. Domain for 1tzs:
    2. Domains for 1ym2:
      1. 2393767Domain d1ym2a_: 1ym2 A: [123679]
        automated match to d1fkna_
      2. 2393768Domain d1ym2b_: 1ym2 B: [123680]
        automated match to d1fkna_
      3. 2393769Domain d1ym2c_: 1ym2 C: [123681]
        automated match to d1fkna_
    3. Domains for 1ym4:
      1. 2393778Domain d1ym4a_: 1ym4 A: [123682]
        automated match to d1fkna_
      2. 2393779Domain d1ym4b_: 1ym4 B: [123683]
        automated match to d1fkna_
      3. 2393780Domain d1ym4c_: 1ym4 C: [123684]
        automated match to d1fkna_
    4. Domain for 2va5:
    5. Domain for 2va6:
    6. Domain for 2va7:
    7. Domain for 2vie:
    8. Domain for 2vij:
    9. Domain for 2viy:
    10. Domain for 2viz:
    11. Domain for 2vj6:
    12. Domain for 2vj7:
    13. Domain for 2vj9:
    14. Domain for 2vnm:
    15. Domain for 2vnn:
    16. Domain for 2wez:
    17. Domain for 2wf0:
    18. Domain for 2wf1:
    19. Domain for 2wf2:
    20. Domain for 2wf3:
    21. Domain for 2wf4:
    22. Domain for 2wjo:
    23. Domain for 2xfi:
    24. Domain for 2xfj:
    25. Domain for 2xfk:
    26. Domain for 3bra:
    27. Domain for 3buf:
    28. Domain for 3bug:
    29. Domain for 3buh:
    30. Domains for 3ckp:
      1. 2393789Domain d3ckpa_: 3ckp A: [156740]
        automated match to d1fkna_
        complexed with 012, cl
      2. 2393790Domain d3ckpb_: 3ckp B: [156741]
        automated match to d1fkna_
        complexed with 012, cl
      3. 2393791Domain d3ckpc_: 3ckp C: [156742]
        automated match to d1fkna_
        complexed with 012, cl
    31. Domains for 3ckr:
      1. 2393795Domain d3ckra_: 3ckr A: [156743]
        automated match to d1fkna_
        complexed with 009
      2. 2393796Domain d3ckrb_: 3ckr B: [156744]
        automated match to d1fkna_
        complexed with 009
      3. 2393797Domain d3ckrc_: 3ckr C: [156745]
        automated match to d1fkna_
        complexed with 009
    32. Domains for 3dm6:
      1. 2393785Domain d3dm6a_: 3dm6 A: [174053]
        automated match to d1fkna_
        complexed with 757, ipa
      2. 2393786Domain d3dm6b_: 3dm6 B: [174054]
        automated match to d1fkna_
        complexed with 757, ipa
      3. 2393787Domain d3dm6c_: 3dm6 C: [174055]
        automated match to d1fkna_
        complexed with 757, ipa
    33. Domains for 3h0b:
      1. 2393792Domain d3h0ba_: 3h0b A: [177127]
        automated match to d1fkna_
        complexed with b35
      2. 2393793Domain d3h0bb_: 3h0b B: [177128]
        automated match to d1fkna_
        complexed with b35
      3. 2393794Domain d3h0bc_: 3h0b C: [177129]
        automated match to d1fkna_
        complexed with b35
    34. Domain for 3zmg:
    35. Domain for 3zov:
    36. Domain for 4b1c:
    37. Domain for 4bek:
    38. Domain for 4bfd:
  4. 2393798Yeast (Candida albicans) [TaxId:5476] [188488] (4 PDB entries)
    1. Domain for 2h6s:
    2. Domain for 2h6t:
    3. Domains for 2qzw:
      1. 2393800Domain d2qzwa_: 2qzw A: [167895]
        automated match to d1eaga_
      2. 2393801Domain d2qzwb_: 2qzw B: [167896]
        automated match to d1eaga_
    4. Domains for 2qzx:
      1. 2393803Domain d2qzxa_: 2qzx A: [167897]
        automated match to d1eaga_
      2. 2393804Domain d2qzxb_: 2qzx B: [167898]
        automated match to d1eaga_
  5. 3054636Plasmodium falciparum [TaxId:36329] [354698] (5 PDB entries)
    1. Domain for 5yia:
    2. Domain for 5yib:
    3. Domain for 5yic:
    4. Domain for 5yid:
    5. Domain for 5yie:

More info for Protein automated matches from b.50.1.2: Pepsin-like

Timeline for Protein automated matches from b.50.1.2: Pepsin-like: