Species:

1. Bacillus cereus [TaxId:222523] [188293] (2 PDB entries)

   1. Domain for 3bja:

      • Domain d3bjaa_: 3bja A: [172659] automated match to d2a61a1

   2. Domain for 4esf:

      • Domain d4esfa_: 4esf A: [193767] automated match to d3hhha_

2. Bacillus cereus [TaxId:226900] [186878] (2 PDB entries)

   1. Domains for 1ylf:

      1. Domain d1ylfb_: 1ylf B: [123649] Other proteins in same PDB: d1ylfa1 automated match to d1xd7a_ complexed with cl

      2. Domain d1ylfc_: 1ylf C: [123650] Other proteins in same PDB: d1ylfa1 automated match to d1xd7a_ complexed with cl

   2. Domain for 4esb:

      • Domain d4esba_: 4esb A: [194251] automated match to d3hhhb_ complexed with gol, so4

3. Bacillus subtilis [TaxId:1423] [187193] (1 PDB entry)

   • Domains for 2hzt:

     1. Domain d2hztb_: 2hzt B: [147463] Other proteins in same PDB: d2hzta1 automated match to d1z7ub1

     2. Domain d2hztc_: 2hzt C: [147464] Other proteins in same PDB: d2hzta1 automated match to d1z7ub1

     3. Domain d2hztd_: 2hzt D: [147465] Other proteins in same PDB: d2hzta1 automated match to d1z7ub1

4. Campylobacter jejuni [TaxId:32022] [195104] (1 PDB entry)

   • Domains for 4ets:

     1. Domain d4etsa_: 4ets A: [195106] automated match to d2xigc_ complexed with cl, zn

     2. Domain d4etsb_: 4ets B: [195105] automated match to d2xigc_ complexed with cl, zn

5. Clostridium acetobutylicum [TaxId:1488] [189157] (1 PDB entry)

   • Domains for 3jw4:

     1. Domain d3jw4a_: 3jw4 A: [178861] automated match to d2fbha1 complexed with gol, imd, k

     2. Domain d3jw4b_: 3jw4 B: [178862] automated match to d2fbha1 complexed with gol, imd, k

     3. Domain d3jw4c_: 3jw4 C: [178863] automated match to d2fbha1 complexed with gol, imd, k

6. Enterococcus faecalis [TaxId:1351] [188913] (1 PDB entry)

   • Domains for 3hhh:

     1. Domain d3hhha_: 3hhh A: [177574] automated match to d1xmab_ complexed with gol, so4

     2. Domain d3hhhb_: 3hhh B: [177575] automated match to d1xmab_ complexed with gol, so4

7. Helicobacter pylori [TaxId:85962] [189614] (1 PDB entry)

   • Domains for 2xig:

     1. Domain d2xiga_: 2xig A: [170114] automated match to d1mzba_ complexed with cit, zn

     2. Domain d2xigb_: 2xig B: [170115] automated match to d1mzba_ complexed with cit, zn

     3. Domain d2xigc_: 2xig C: [170116] automated match to d1mzba_ complexed with cit, zn

     4. Domain d2xigd_: 2xig D: [170117] automated match to d1mzba_ complexed with cit, zn

8. Human (Homo sapiens) [TaxId:9606] [186924] (2 PDB entries)

   1. Domains for 2a07:

      1. Domain d2a07g_: 2a07 G: [125939] Other proteins in same PDB: d2a07f1 automated match to d1d5va_ protein/DNA complex; complexed with mg

      2. Domain d2a07h_: 2a07 H: [125940] Other proteins in same PDB: d2a07f1 automated match to d1d5va_ protein/DNA complex; complexed with mg

      3. Domain d2a07i_: 2a07 I: [125941] Other proteins in same PDB: d2a07f1 automated match to d1d5va_ protein/DNA complex; complexed with mg

      4. Domain d2a07j_: 2a07 J: [125942] Other proteins in same PDB: d2a07f1 automated match to d1d5va_ protein/DNA complex; complexed with mg

      5. Domain d2a07k_: 2a07 K: [125943] Other proteins in same PDB: d2a07f1 automated match to d1d5va_ protein/DNA complex; complexed with mg

   2. Domains for 2as5:

      1. Domain d2as5f_: 2as5 F: [127235] Other proteins in same PDB: d2as5m1, d2as5m2, d2as5n1, d2as5n2 automated match to d1d5va_ protein/DNA complex; complexed with mg

      2. Domain d2as5g_: 2as5 G: [127236] Other proteins in same PDB: d2as5m1, d2as5m2, d2as5n1, d2as5n2 automated match to d1d5va_ protein/DNA complex; complexed with mg

9. Lactobacillus plantarum [TaxId:1590] [189101] (1 PDB entry)

   • Domain for 3k69:

     • Domain d3k69a_: 3k69 A: [179112] automated match to d1ylfa1 complexed with dms

10. Lactococcus lactis [TaxId:416870] [188710] (2 PDB entries)

    1. Domains for 3f8b:

       1. Domain d3f8ba_: 3f8b A: [175565] automated match to d1xmab_

       2. Domain d3f8bb_: 3f8b B: [175566] automated match to d1xmab_

    2. Domain for 3f8c:

       • Domain d3f8ca_: 3f8c A: [196111] automated match to d3f8ba_ complexed with ht1

11. Mouse (Mus musculus) [TaxId:10090] [189892] (1 PDB entry)

    • Domains for 3qu3:

      1. Domain d3qu3a_: 3qu3 A: [184626] automated match to d1t2ka_ complexed with edo, na

      2. Domain d3qu3b_: 3qu3 B: [184627] automated match to d1t2ka_ complexed with edo, na

      3. Domain d3qu3c_: 3qu3 C: [184628] automated match to d1t2ka_ complexed with edo, na

12. Mycobacterium tuberculosis [TaxId:1773] [187939] (1 PDB entry)

    • Domain for 2o03:

      • Domain d2o03a_: 2o03 A: [166480] automated match to d1mzba_ complexed with zn

13. Staphylococcus aureus [TaxId:1280] [193082] (1 PDB entry)

    • Domains for 4hqm:

      1. Domain d4hqma_: 4hqm A: [193083] automated match to d3df8a_ protein/DNA complex; complexed with 17z

      2. Domain d4hqmb_: 4hqm B: [193084] automated match to d3df8a_ protein/DNA complex; complexed with 17z

14. Staphylococcus aureus [TaxId:158878] [188763] (1 PDB entry)

    • Domains for 3eco:

      1. Domain d3ecoa_: 3eco A: [174833] automated match to d3broa1 complexed with so4

      2. Domain d3ecob_: 3eco B: [174834] automated match to d3broa1 complexed with so4

15. Streptococcus mutans [TaxId:210007] [189554] (1 PDB entry)

    • Domain for 3l7w:

      • Domain d3l7wa_: 3l7w A: [180067] automated match to d1xmaa_

16. Streptococcus pyogenes [TaxId:198466] [193090] (1 PDB entry)

    • Domains for 4i7h:

      1. Domain d4i7ha_: 4i7h A: [193092] automated match to d2xigc_ complexed with ni, zn

      2. Domain d4i7hb_: 4i7h B: [193091] automated match to d2xigc_ complexed with ni, zn

17. Streptomyces coelicolor [TaxId:1902] [196367] (2 PDB entries)

    1. Domain for 3eyy:

       • Domain d3eyyb_: 3eyy B: [196572] automated match to d2o03a_ complexed with cl, edo, mli, ni, zn

    2. Domain for 3mwm:

       • Domain d3mwmb_: 3mwm B: [196368] automated match to d2o03a_ complexed with zn

18. Thermoplasma acidophilum [TaxId:2303] [196079] (1 PDB entry)

    • Domain for 3elk:

      • Domain d3elkb_: 3elk B: [196080] automated match to d3hhha_ complexed with cl

19. Thermoplasma volcanium [TaxId:50339] [188518] (1 PDB entry)

    • Domain for 3df8:

      • Domain d3df8a_: 3df8 A: [173882] automated match to d1yyva1 complexed with act

More info for Protein automated matches from a.4.5.0: automated matches

Timeline for Protein automated matches from a.4.5.0: automated matches:

• Protein automated matches from a.4.5.0: automated matches first appeared in SCOPe 2.01
  
• Protein automated matches from a.4.5.0: automated matches appears in SCOPe 2.03
  
• Protein automated matches from a.4.5.0: automated matches appears in the current release, SCOPe 2.08