Lineage for Protein: automated matches

  1. Root: SCOPe 2.01
  2. 901761Class a: All alpha proteins [46456] (284 folds)
  3. 905281Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (14 superfamilies)
    core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down
  4. 906051Superfamily a.4.5: "Winged helix" DNA-binding domain [46785] (85 families) (S)
    contains a small beta-sheet (wing)
  5. 907312Family a.4.5.0: automated matches [191329] (1 protein)
    not a true family
  6. 907313Protein automated matches [190154] (14 species)
    not a true protein

Species:

  1. 907314Bacillus cereus [TaxId:222523] [188293] (1 PDB entry)
  2. 907316Bacillus cereus [TaxId:226900] [186878] (1 PDB entry)
  3. 907319Bacillus subtilis [TaxId:1423] [187193] (1 PDB entry)
  4. 907323Clostridium acetobutylicum [TaxId:1488] [189157] (1 PDB entry)
  5. 907327Enterococcus faecalis [TaxId:1351] [188913] (1 PDB entry)
  6. 907330Helicobacter pylori [TaxId:85962] [189614] (1 PDB entry)
  7. 907335Human (Homo sapiens) [TaxId:9606] [186924] (2 PDB entries)
    1. Domains for 2a07:
      1. 907336Domain d2a07g_: 2a07 G: [125939]
        Other proteins in same PDB: d2a07f1
        automated match to d1d5va_
        protein/DNA complex; complexed with mg
      2. 907337Domain d2a07h_: 2a07 H: [125940]
        Other proteins in same PDB: d2a07f1
        automated match to d1d5va_
        protein/DNA complex; complexed with mg
      3. 907338Domain d2a07i_: 2a07 I: [125941]
        Other proteins in same PDB: d2a07f1
        automated match to d1d5va_
        protein/DNA complex; complexed with mg
      4. 907339Domain d2a07j_: 2a07 J: [125942]
        Other proteins in same PDB: d2a07f1
        automated match to d1d5va_
        protein/DNA complex; complexed with mg
      5. 907340Domain d2a07k_: 2a07 K: [125943]
        Other proteins in same PDB: d2a07f1
        automated match to d1d5va_
        protein/DNA complex; complexed with mg
    2. Domains for 2as5:
      1. 907341Domain d2as5f_: 2as5 F: [127235]
        Other proteins in same PDB: d2as5m1, d2as5m2, d2as5n1, d2as5n2
        automated match to d1d5va_
        protein/DNA complex; complexed with mg
      2. 907342Domain d2as5g_: 2as5 G: [127236]
        Other proteins in same PDB: d2as5m1, d2as5m2, d2as5n1, d2as5n2
        automated match to d1d5va_
        protein/DNA complex; complexed with mg
  8. 907343Lactobacillus plantarum [TaxId:1590] [189101] (1 PDB entry)
  9. 907345Lactococcus lactis [TaxId:416870] [188710] (1 PDB entry)
  10. 907348Mouse (Mus musculus) [TaxId:10090] [189892] (1 PDB entry)
  11. 907352Mycobacterium tuberculosis [TaxId:1773] [187939] (1 PDB entry)
  12. 907354Staphylococcus aureus [TaxId:158878] [188763] (1 PDB entry)
  13. 907357Streptococcus mutans [TaxId:210007] [189554] (1 PDB entry)
  14. 907359Thermoplasma volcanium [TaxId:50339] [188518] (1 PDB entry)

More info for Protein automated matches from a.4.5.0: automated matches

Timeline for Protein automated matches from a.4.5.0: automated matches: