Species:

1. Aeropyrum pernix [TaxId:272557] [188211] (1 PDB entry)

   • Domain for 2epj:

     • Domain d2epja_: 2epj A: [164193] automated match to d2gsaa_ complexed with pmp

2. Aeropyrum pernix [TaxId:56636] [188642] (2 PDB entries)

   1. Domain for 2zsl:

      • Domain d2zsla_: 2zsl A: [171470] automated match to d2gsaa_ complexed with pmp

   2. Domains for 2zsm:

      1. Domain d2zsma_: 2zsm A: [171471] automated match to d2gsaa_ complexed with cl, pmp

      2. Domain d2zsmb_: 2zsm B: [171472] automated match to d2gsaa_ complexed with cl, pmp

      3. Domain d2zsmc_: 2zsm C: [171473] automated match to d2gsaa_ complexed with cl, pmp

3. African malaria mosquito (Anopheles gambiae) [TaxId:7165] [187029] (2 PDB entries)

   1. Domains for 2ch1:

      1. Domain d2ch1b_: 2ch1 B: [130440] Other proteins in same PDB: d2ch1a1 automated match to d1h0ca_ complexed with gol, llp

      2. Domain d2ch1c_: 2ch1 C: [130441] Other proteins in same PDB: d2ch1a1 automated match to d1h0ca_ complexed with gol, llp

      3. Domain d2ch1d_: 2ch1 D: [130442] Other proteins in same PDB: d2ch1a1 automated match to d1h0ca_ complexed with gol, llp

   2. Domains for 2ch2:

      1. Domain d2ch2a_: 2ch2 A: [130443] automated match to d1h0ca_ complexed with ky1, llp

      2. Domain d2ch2b_: 2ch2 B: [130444] automated match to d1h0ca_ complexed with ky1, llp

      3. Domain d2ch2c_: 2ch2 C: [130445] automated match to d1h0ca_ complexed with ky1, llp

      4. Domain d2ch2d_: 2ch2 D: [130446] automated match to d1h0ca_ complexed with ky1, llp

4. Bacillus anthracis [TaxId:261594] [189194] (2 PDB entries)

   1. Domains for 3l44:

      1. Domain d3l44a_: 3l44 A: [179929] automated match to d2gsaa_

      2. Domain d3l44b_: 3l44 B: [179930] automated match to d2gsaa_

   2. Domains for 3ruy:

      1. Domain d3ruya_: 3ruy A: [185193] automated match to d1gbna_

      2. Domain d3ruyb_: 3ruy B: [185194] automated match to d1gbna_

5. Bacillus circulans [TaxId:1397] [187516] (2 PDB entries)

   1. Domain for 2c7t:

      • Domain d2c7ta_: 2c7t A: [163289] automated match to d1b9ha_ complexed with plp, so4

   2. Domain for 2c81:

      • Domain d2c81a_: 2c81 A: [163296] automated match to d1b9ha_ complexed with pmp

6. Bacillus subtilis [TaxId:1423] [188928] (1 PDB entry)

   • Domains for 3dod:

     1. Domain d3doda_: 3dod A: [174094] automated match to d1s0aa_ complexed with plp

     2. Domain d3dodb_: 3dod B: [174095] automated match to d1s0aa_ complexed with plp

7. Campylobacter jejuni [TaxId:197] [189298] (2 PDB entries)

   1. Domains for 3m5u:

      1. Domain d3m5ua_: 3m5u A: [180880] automated match to d1w23a_ complexed with gol, mes

      2. Domain d3m5ub_: 3m5u B: [180881] automated match to d1w23a_ complexed with gol, mes

   2. Domains for 3n0l:

      1. Domain d3n0la_: 3n0l A: [181757] automated match to d1dfoa_ complexed with so4

      2. Domain d3n0lb_: 3n0l B: [181758] automated match to d1dfoa_ complexed with so4

8. Caulobacter crescentus [TaxId:190650] [188372] (1 PDB entry)

   • Domains for 3bn1:

     1. Domain d3bn1a_: 3bn1 A: [172711] automated match to d1mdoa_ complexed with act, akg, na

     2. Domain d3bn1b_: 3bn1 B: [172712] automated match to d1mdoa_ complexed with act, akg, na

     3. Domain d3bn1c_: 3bn1 C: [172713] automated match to d1mdoa_ complexed with act, akg, na

     4. Domain d3bn1d_: 3bn1 D: [172714] automated match to d1mdoa_ complexed with act, akg, na

9. Clostridium acetobutylicum [TaxId:1488] [188774] (1 PDB entry)

   • Domains for 3ftb:

     1. Domain d3ftba_: 3ftb A: [176055] automated match to d1lc5a_ complexed with po4

     2. Domain d3ftbb_: 3ftb B: [176056] automated match to d1lc5a_ complexed with po4

     3. Domain d3ftbd_: 3ftb D: [176057] automated match to d1lc5a_ complexed with po4

     4. Domain d3ftbe_: 3ftb E: [176058] automated match to d1lc5a_ complexed with po4

10. Escherichia coli [TaxId:562] [187268] (1 PDB entry)

    • Domains for 2c44:

      1. Domain d2c44b_: 2c44 B: [146372] Other proteins in same PDB: d2c44a1 automated match to d1ax4a_ complexed with k, so4

      2. Domain d2c44c_: 2c44 C: [146373] Other proteins in same PDB: d2c44a1 automated match to d1ax4a_ complexed with k, so4

      3. Domain d2c44d_: 2c44 D: [146374] Other proteins in same PDB: d2c44a1 automated match to d1ax4a_ complexed with k, so4

11. Helicobacter pylori [TaxId:85962] [188666] (1 PDB entry)

    • Domains for 3ezs:

      1. Domain d3ezsa_: 3ezs A: [175341] automated match to d2gb3e1 complexed with edo, po4

      2. Domain d3ezsb_: 3ezs B: [175342] automated match to d2gb3e1 complexed with edo, po4

12. Human (Homo sapiens) [TaxId:9606] [188446] (7 PDB entries)

    1. Domains for 2nmp:

       1. Domain d2nmpa_: 2nmp A: [166303] automated match to d1n8pa_ complexed with plp

       2. Domain d2nmpb_: 2nmp B: [166304] automated match to d1n8pa_ complexed with plp

       3. Domain d2nmpc_: 2nmp C: [166305] automated match to d1n8pa_ complexed with plp

       4. Domain d2nmpd_: 2nmp D: [166306] automated match to d1n8pa_ complexed with plp

    2. Domains for 2qlr:

       1. Domain d2qlra_: 2qlr A: [167714] automated match to d1x0ma1 complexed with gol

       2. Domain d2qlrb_: 2qlr B: [167715] automated match to d1x0ma1 complexed with gol

       3. Domain d2qlrc_: 2qlr C: [167716] automated match to d1x0ma1 complexed with gol

       4. Domain d2qlrd_: 2qlr D: [167717] automated match to d1x0ma1 complexed with gol

    3. Domains for 2r2n:

       1. Domain d2r2na_: 2r2n A: [167938] automated match to d1x0ma1 complexed with gol, kyn, pmp

       2. Domain d2r2nb_: 2r2n B: [167939] automated match to d1x0ma1 complexed with gol, kyn, pmp

       3. Domain d2r2nc_: 2r2n C: [167940] automated match to d1x0ma1 complexed with gol, kyn, pmp

       4. Domain d2r2nd_: 2r2n D: [167941] automated match to d1x0ma1 complexed with gol, kyn, pmp

    4. Domains for 2vgz:

       1. Domain d2vgza_: 2vgz A: [168597] automated match to d1x0ma1 complexed with iod

       2. Domain d2vgzb_: 2vgz B: [168598] automated match to d1x0ma1 complexed with iod

    5. Domains for 2xh1:

       1. Domain d2xh1a_: 2xh1 A: [170089] automated match to d1x0ma1 complexed with bf5, gol, iod, plp

       2. Domain d2xh1b_: 2xh1 B: [170090] automated match to d1x0ma1 complexed with bf5, gol, iod, plp

    6. Domains for 3cog:

       1. Domain d3coga_: 3cog A: [173374] automated match to d1n8pa_ complexed with 2ag, gol, no3, peg, plp

       2. Domain d3cogb_: 3cog B: [173375] automated match to d1n8pa_ complexed with 2ag, gol, no3, peg, plp

       3. Domain d3cogc_: 3cog C: [173376] automated match to d1n8pa_ complexed with 2ag, gol, no3, peg, plp

       4. Domain d3cogd_: 3cog D: [173377] automated match to d1n8pa_ complexed with 2ag, gol, no3, peg, plp

    7. Domains for 3dc1:

       1. Domain d3dc1a_: 3dc1 A: [173809] automated match to d1x0ma1 complexed with akg, gol

       2. Domain d3dc1b_: 3dc1 B: [173810] automated match to d1x0ma1 complexed with akg, gol

       3. Domain d3dc1c_: 3dc1 C: [173811] automated match to d1x0ma1 complexed with akg, gol

       4. Domain d3dc1d_: 3dc1 D: [173812] automated match to d1x0ma1 complexed with akg, gol

13. Lactobacillus delbrueckii [TaxId:321956] [188555] (1 PDB entry)

    • Domains for 3dzz:

      1. Domain d3dzza_: 3dzz A: [174419] automated match to d1c7na_ complexed with act, ca, cl, peg, pg4

      2. Domain d3dzzb_: 3dzz B: [174420] automated match to d1c7na_ complexed with act, ca, cl, peg, pg4

14. Listeria innocua [TaxId:1642] [188713] (1 PDB entry)

    • Domains for 3ffh:

      1. Domain d3ffha_: 3ffh A: [175754] automated match to d1fg3a_ complexed with so4

      2. Domain d3ffhb_: 3ffh B: [175755] automated match to d1fg3a_ complexed with so4

15. Methanococcus jannaschii [TaxId:2190] [188462] (1 PDB entry)

    • Domain for 2z61:

      • Domain d2z61a_: 2z61 A: [171066] automated match to d1o4sb_

16. Mouse (Mus musculus) [TaxId:10090] [188700] (4 PDB entries)

    1. Domains for 3e2f:

       1. Domain d3e2fa_: 3e2f A: [174562] automated match to d1w7la_ complexed with gol

       2. Domain d3e2fb_: 3e2f B: [174563] automated match to d1w7la_ complexed with gol

    2. Domains for 3e2y:

       1. Domain d3e2ya_: 3e2y A: [174578] automated match to d1w7la_ complexed with gln, gol, pmp

       2. Domain d3e2yb_: 3e2y B: [174579] automated match to d1w7la_ complexed with gln, gol, pmp

    3. Domains for 3e2z:

       1. Domain d3e2za_: 3e2z A: [174580] automated match to d1w7la_ complexed with gol, kyn, pmp

       2. Domain d3e2zb_: 3e2z B: [174581] automated match to d1w7la_ complexed with gol, kyn, pmp

    4. Domain for 3pdx:

       • Domain d3pdxa_: 3pdx A: [183676] automated match to d1bw0a_

17. Mycobacterium tuberculosis [TaxId:83332] [187938] (1 PDB entry)

    • Domains for 2o0r:

      1. Domain d2o0ra_: 2o0r A: [166482] automated match to d1u08a_ complexed with cl, gol, na

      2. Domain d2o0rb_: 2o0r B: [166483] automated match to d1u08a_ complexed with cl, gol, na

18. Mycobacterium ulcerans [TaxId:362242] [189655] (2 PDB entries)

    1. Domains for 3qhx:

       1. Domain d3qhxa_: 3qhx A: [184390] automated match to d1n8pa_ complexed with epe, gol, na, so4

       2. Domain d3qhxb_: 3qhx B: [184391] automated match to d1n8pa_ complexed with epe, gol, na, so4

       3. Domain d3qhxc_: 3qhx C: [184392] automated match to d1n8pa_ complexed with epe, gol, na, so4

       4. Domain d3qhxd_: 3qhx D: [184393] automated match to d1n8pa_ complexed with epe, gol, na, so4

    2. Domains for 3qi6:

       1. Domain d3qi6a_: 3qi6 A: [184396] automated match to d1n8pa_ complexed with edo, gol, na, so4

       2. Domain d3qi6b_: 3qi6 B: [184397] automated match to d1n8pa_ complexed with edo, gol, na, so4

       3. Domain d3qi6c_: 3qi6 C: [184398] automated match to d1n8pa_ complexed with edo, gol, na, so4

       4. Domain d3qi6d_: 3qi6 D: [184399] automated match to d1n8pa_ complexed with edo, gol, na, so4

19. Plasmodium falciparum [TaxId:36329] [189486] (1 PDB entry)

    • Domain for 3k7y:

      • Domain d3k7ya_: 3k7y A: [179174] automated match to d1amaa_ complexed with act, plp

20. Ralstonia eutropha [TaxId:264198] [188659] (1 PDB entry)

    • Domains for 3euc:

      1. Domain d3euca_: 3euc A: [175220] automated match to d1fg3a_ complexed with gol, so4

      2. Domain d3eucb_: 3euc B: [175221] automated match to d1fg3a_ complexed with gol, so4

21. Thermococcus litoralis [TaxId:2265] [188474] (1 PDB entry)

    • Domains for 2zc0:

      1. Domain d2zc0a_: 2zc0 A: [171145] automated match to d1wsta1 complexed with imd, pmp, zn

      2. Domain d2zc0b_: 2zc0 B: [171146] automated match to d1wsta1 complexed with imd, pmp, zn

      3. Domain d2zc0c_: 2zc0 C: [171147] automated match to d1wsta1 complexed with imd, pmp, zn

      4. Domain d2zc0d_: 2zc0 D: [171148] automated match to d1wsta1 complexed with imd, pmp, zn

22. Thermus thermophilus [TaxId:300852] [187350] (1 PDB entry)

    • Domain for 2e7u:

      • Domain d2e7ua_: 2e7u A: [163899] automated match to d2gsaa_ complexed with gol, na, pmp

23. Xanthomonas oryzae [TaxId:291331] [189393] (2 PDB entries)

    1. Domains for 3nmy:

       1. Domain d3nmya_: 3nmy A: [182415] automated match to d1y4ia1 complexed with bct, bme, gol, plp

       2. Domain d3nmyb_: 3nmy B: [182416] automated match to d1y4ia1 complexed with bct, bme, gol, plp

       3. Domain d3nmyc_: 3nmy C: [182417] automated match to d1y4ia1 complexed with bct, bme, gol, plp

       4. Domain d3nmyd_: 3nmy D: [182418] automated match to d1y4ia1 complexed with bct, bme, gol, plp

    2. Domains for 3nnp:

       1. Domain d3nnpa_: 3nnp A: [182423] automated match to d1y4ia1 complexed with bct, gol, plp

       2. Domain d3nnpb_: 3nnp B: [182424] automated match to d1y4ia1 complexed with bct, gol, plp

24. Xanthomonas oryzae [TaxId:64187] [188962] (1 PDB entry)

    • Domains for 3e6g:

      1. Domain d3e6ga_: 3e6g A: [174688] automated match to d1y4ia1

      2. Domain d3e6gb_: 3e6g B: [174689] automated match to d1y4ia1

      3. Domain d3e6gc_: 3e6g C: [174690] automated match to d1y4ia1

      4. Domain d3e6gd_: 3e6g D: [174691] automated match to d1y4ia1

25. Yellow fever mosquito (Aedes aegypti) [TaxId:7159] [186876] (5 PDB entries)

    1. Domain for 1yiy:

       • Domain d1yiyb_: 1yiy B: [123374] Other proteins in same PDB: d1yiya1 automated match to d1w7la_ complexed with br, pmp

    2. Domains for 1yiz:

       1. Domain d1yiza_: 1yiz A: [123375] automated match to d1w7la_ complexed with br

       2. Domain d1yizb_: 1yiz B: [123376] automated match to d1w7la_ complexed with br

    3. Domains for 2huf:

       1. Domain d2hufa_: 2huf A: [165276] automated match to d2ch1a1 complexed with 1bo

       2. Domain d2hufb_: 2huf B: [165277] automated match to d2ch1a1 complexed with 1bo

    4. Domains for 2hui:

       1. Domain d2huia_: 2hui A: [165278] automated match to d2ch1a1 complexed with glv

       2. Domain d2huib_: 2hui B: [165279] automated match to d2ch1a1 complexed with glv

    5. Domains for 2huu:

       1. Domain d2huua_: 2huu A: [165296] automated match to d2ch1a1 complexed with 1bo, ala

       2. Domain d2huub_: 2huu B: [165297] automated match to d2ch1a1 complexed with 1bo, ala

More info for Protein automated matches from c.67.1.0: automated matches

Timeline for Protein automated matches from c.67.1.0: automated matches:

• Protein automated matches from c.67.1.0: automated matches is new in SCOPe 2.01-stable
  
• Protein automated matches from c.67.1.0: automated matches appears in SCOPe 2.02
  
• Protein automated matches from c.67.1.0: automated matches appears in the current release, SCOPe 2.08