Species:

1. Acinetobacter baumannii [TaxId:480119] [226540] (1 PDB entry)

   • Domain for 4i6k:

     • Domain d4i6ka_: 4i6k A: [222961] automated match to d2ffia1 complexed with cit

2. Arthrobacter aurescens [TaxId:290340] [189973] (1 PDB entry)

   • Domains for 3rys:

     1. Domain d3rysa_: 3rys A: [185214] automated match to d1ndva_ complexed with ade, zn

     2. Domain d3rysb_: 3rys B: [185215] automated match to d1ndva_ complexed with ade, zn

3. Bordetella bronchiseptica [TaxId:518] [255848] (2 PDB entries)

   1. Domains for 3gip:

      1. Domain d3gipa2: 3gip A:61-418 [246305] Other proteins in same PDB: d3gipa1, d3gipa3, d3gipb1, d3gipb3 automated match to d1rk6a3 complexed with acy, fmt, zn

      2. Domain d3gipb2: 3gip B:61-418 [246308] Other proteins in same PDB: d3gipa1, d3gipa3, d3gipb1, d3gipb3 automated match to d1rk6a3 complexed with acy, fmt, zn

   2. Domains for 3giq:

      1. Domain d3giqa2: 3giq A:61-418 [246311] Other proteins in same PDB: d3giqa1, d3giqa3, d3giqb1, d3giqb3 automated match to d1rk6a3 complexed with g01, zn

      2. Domain d3giqb2: 3giq B:61-418 [246314] Other proteins in same PDB: d3giqa1, d3giqa3, d3giqb1, d3giqb3 automated match to d1rk6a3 complexed with g01, zn

4. Burkholderia cenocepacia [TaxId:216591] [256356] (1 PDB entry)

   • Domains for 4lfy:

     1. Domain d4lfya_: 4lfy A: [253577] automated match to d2eg6a_ complexed with ca, edo, zn

     2. Domain d4lfyb_: 4lfy B: [253578] automated match to d2eg6a_ complexed with ca, edo, zn

5. Campylobacter jejuni [TaxId:192222] [226030] (1 PDB entry)

   • Domains for 3pnu:

     1. Domain d3pnua_: 3pnu A: [214881] automated match to d2z29b_ complexed with po4, zn

     2. Domain d3pnub_: 3pnu B: [214882] automated match to d2z29b_ complexed with po4, zn

6. Caulobacter vibrioides [TaxId:190650] [255551] (1 PDB entry)

   • Domains for 2q01:

     1. Domain d2q01a_: 2q01 A: [243510] automated match to d3iaca_ complexed with k

     2. Domain d2q01b_: 2q01 B: [243511] automated match to d3iaca_ complexed with k

     3. Domain d2q01c_: 2q01 C: [243512] automated match to d3iaca_ complexed with k

7. Deinococcus radiodurans [TaxId:1299] [188838] (1 PDB entry)

   • Domain for 3gg7:

     • Domain d3gg7a_: 3gg7 A: [176612] automated match to d1zzma1 complexed with mn, mpd, mrd, so4

8. Escherichia coli K-12 [TaxId:83333] [186875] (1 PDB entry)

   • Domain for 1yix:

     • Domain d1yixb_: 1yix B: [123372] Other proteins in same PDB: d1yixa1 automated match to d1j6oa_ complexed with zn

9. Escherichia coli [TaxId:83333] [257011] (1 PDB entry)

   • Domains for 4lef:

     1. Domain d4lefa_: 4lef A: [257012] automated match to d2oqlb_ complexed with bgc, po4, zn

     2. Domain d4lefb_: 4lef B: [262925] automated match to d2oqlb_ complexed with bgc, po4, zn

     3. Domain d4lefc_: 4lef C: [262926] automated match to d2oqlb_ complexed with bgc, po4, zn

     4. Domain d4lefd_: 4lef D: [262927] automated match to d2oqlb_ complexed with bgc, po4, zn

     5. Domain d4lefe_: 4lef E: [262928] automated match to d2oqlb_ complexed with bgc, po4, zn

     6. Domain d4leff_: 4lef F: [262929] automated match to d2oqlb_ complexed with bgc, po4, zn

     7. Domain d4lefg_: 4lef G: [262930] automated match to d2oqlb_ complexed with bgc, po4, zn

     8. Domain d4lefh_: 4lef H: [262931] automated match to d2oqlb_ complexed with bgc, po4, zn

10. Geobacillus kaustophilus [TaxId:1462] [189526] (16 PDB entries)

    1. Domain for 3ojg:

       • Domain d3ojga_: 3ojg A: [183070] automated match to d2d2ga1 complexed with fe, hl4, zn

    2. Domains for 3orw:

       1. Domain d3orwa_: 3orw A: [200157] automated match to d3orwb_ complexed with co

       2. Domain d3orwb_: 3orw B: [196165] automated match to d3ojga_ complexed with co

    3. Domains for 3tn3:

       1. Domain d3tn3a_: 3tn3 A: [249953] automated match to d3orwa_ complexed with co

       2. Domain d3tn3b_: 3tn3 B: [249954] automated match to d3orwa_ complexed with co

    4. Domains for 3tn4:

       1. Domain d3tn4a_: 3tn4 A: [249955] automated match to d3orwa_ complexed with co; mutant

       2. Domain d3tn4b_: 3tn4 B: [249956] automated match to d3orwa_ complexed with co; mutant

    5. Domains for 3tn5:

       1. Domain d3tn5a_: 3tn5 A: [249957] automated match to d3orwa_ complexed with co, po4; mutant

       2. Domain d3tn5b_: 3tn5 B: [249958] automated match to d3orwa_ complexed with co, po4; mutant

    6. Domains for 3tn6:

       1. Domain d3tn6a_: 3tn6 A: [249959] automated match to d3orwa_ complexed with co; mutant

       2. Domain d3tn6b_: 3tn6 B: [249960] automated match to d3orwa_ complexed with co; mutant

    7. Domains for 3tnb:

       1. Domain d3tnba_: 3tnb A: [249962] automated match to d3orwa_ complexed with co; mutant

       2. Domain d3tnbb_: 3tnb B: [249963] automated match to d3orwa_ complexed with co; mutant

    8. Domains for 4h9t:

       1. Domain d4h9ta_: 4h9t A: [193071] automated match to d3ojga_ complexed with fe, hl4, mn; mutant

       2. Domain d4h9tb_: 4h9t B: [202395] automated match to d4h9ta_ complexed with fe, hl4, mn; mutant

    9. Domains for 4h9u:

       1. Domain d4h9ua_: 4h9u A: [202396] automated match to d4h9ub_ complexed with fe, oh, zn

       2. Domain d4h9ub_: 4h9u B: [193074] automated match to d3ojga_ complexed with fe, oh, zn

    10. Domains for 4h9v:

        1. Domain d4h9va_: 4h9v A: [193076] automated match to d3ojga_ complexed with fe, oh, zn; mutant

        2. Domain d4h9vb_: 4h9v B: [193075] automated match to d3ojga_ complexed with fe, oh, zn; mutant

    11. Domains for 4h9x:

        1. Domain d4h9xa_: 4h9x A: [193073] automated match to d3ojga_ complexed with fe, hl4, oh, zn; mutant

        2. Domain d4h9xb_: 4h9x B: [202397] automated match to d4h9xa_ complexed with fe, hl4, oh, zn; mutant

    12. Domains for 4h9y:

        1. Domain d4h9ya_: 4h9y A: [193070] automated match to d3ojga_ complexed with fe, oh, zn; mutant

        2. Domain d4h9yb_: 4h9y B: [202398] automated match to d4h9ya_ complexed with fe, oh, zn; mutant

    13. Domains for 4h9z:

        1. Domain d4h9za_: 4h9z A: [222449] automated match to d4h9ya_ complexed with fe, mn; mutant

        2. Domain d4h9zb_: 4h9z B: [222450] automated match to d4h9ya_ complexed with fe, mn; mutant

    14. Domains for 4ha0:

        1. Domain d4ha0a_: 4ha0 A: [193078] automated match to d3ojga_ complexed with fe, oh, zn; mutant

        2. Domain d4ha0b_: 4ha0 B: [202399] automated match to d4ha0a_ complexed with fe, oh, zn; mutant

    15. Domains for 4wvx:

        1. Domain d4wvxa_: 4wvx A: [279353] automated match to d3tn5a_ complexed with co, edo

        2. Domain d4wvxb_: 4wvx B: [279352] automated match to d3tn5a_ complexed with co, edo

    16. Domains for 5ch9:

        1. Domain d5ch9a_: 5ch9 A: [276653] automated match to d3tn5a_ complexed with co; mutant

        2. Domain d5ch9b_: 5ch9 B: [276652] automated match to d3tn5a_ complexed with co; mutant

11. Geobacillus stearothermophilus [TaxId:272567] [188974] (2 PDB entries)

    1. Domains for 3f4c:

       1. Domain d3f4ca_: 3f4c A: [175456] automated match to d2d2ga1 complexed with co, gol

       2. Domain d3f4cb_: 3f4c B: [175457] automated match to d2d2ga1 complexed with co, gol

    2. Domains for 3f4d:

       1. Domain d3f4da_: 3f4d A: [175458] automated match to d2d2ga1 complexed with co

       2. Domain d3f4db_: 3f4d B: [175459] automated match to d2d2ga1 complexed with co

12. Human (Homo sapiens) [TaxId:9606] [189102] (6 PDB entries)

    1. Domain for 2wm1:

       • Domain d2wm1a_: 2wm1 A: [169441] automated match to d2hbva1 complexed with 13p, gol, zn

    2. Domains for 2y1h:

       1. Domain d2y1ha_: 2y1h A: [196394] automated match to d2gzxa_ complexed with edo, ni, po4, zn

       2. Domain d2y1hb_: 2y1h B: [196393] automated match to d2gzxa_ complexed with edo, ni, po4, zn

    3. Domains for 4igm:

       1. Domain d4igma_: 4igm A: [256777] automated match to d2wm1a_ complexed with zn

       2. Domain d4igmb_: 4igm B: [256778] automated match to d2wm1a_ complexed with zn

       3. Domain d4igmc_: 4igm C: [256779] automated match to d2wm1a_ complexed with zn

       4. Domain d4igmd_: 4igm D: [262719] automated match to d4ofca_ complexed with zn

       5. Domain d4igme_: 4igm E: [262720] automated match to d4ofca_ complexed with zn

       6. Domain d4igmf_: 4igm F: [262721] automated match to d4ofca_ complexed with zn

    4. Domains for 4ign:

       1. Domain d4igna_: 4ign A: [256780] automated match to d2wm1a_ complexed with zn; mutant

       2. Domain d4ignb_: 4ign B: [261074] automated match to d2wm1a_ complexed with zn; mutant

       3. Domain d4ignc_: 4ign C: [261072] automated match to d2wm1a_ complexed with zn; mutant

       4. Domain d4ignd_: 4ign D: [261071] automated match to d2wm1a_ complexed with zn; mutant

       5. Domain d4igne_: 4ign E: [261070] automated match to d2wm1a_ complexed with zn; mutant

       6. Domain d4ignf_: 4ign F: [261073] automated match to d2wm1a_ complexed with zn; mutant

    5. Domain for 4ih3:

       • Domain d4ih3a_: 4ih3 A: [261210] automated match to d2wm1a_ complexed with pdc, zn

    6. Domains for 4ofc:

       1. Domain d4ofca_: 4ofc A: [261117] automated match to d2wm1a_ complexed with zn

       2. Domain d4ofcb_: 4ofc B: [261233] automated match to d2wm1a_ complexed with zn

       3. Domain d4ofcd_: 4ofc D: [261118] automated match to d2wm1a_ complexed with zn

13. Lactobacillus acidophilus [TaxId:1579] [225736] (1 PDB entry)

    • Domains for 3ij6:

      1. Domain d3ij6a_: 3ij6 A: [211713] automated match to d2f6ka1 complexed with na, zn

      2. Domain d3ij6b_: 3ij6 B: [211714] automated match to d2f6ka1 complexed with na, zn

      3. Domain d3ij6c_: 3ij6 C: [211715] automated match to d2f6ka1 complexed with na, zn

      4. Domain d3ij6d_: 3ij6 D: [211716] automated match to d2f6ka1 complexed with na, zn

14. Listeria monocytogenes [TaxId:267410] [189815] (1 PDB entry)

    • Domains for 3pnz:

      1. Domain d3pnza_: 3pnz A: [183900] automated match to d1bf6a_ complexed with gol, po4, zn

      2. Domain d3pnzb_: 3pnz B: [183901] automated match to d1bf6a_ complexed with gol, po4, zn

      3. Domain d3pnzc_: 3pnz C: [183902] automated match to d1bf6a_ complexed with gol, po4, zn

      4. Domain d3pnzd_: 3pnz D: [183903] automated match to d1bf6a_ complexed with gol, po4, zn

      5. Domain d3pnze_: 3pnz E: [183904] automated match to d1bf6a_ complexed with gol, po4, zn

      6. Domain d3pnzf_: 3pnz F: [183905] automated match to d1bf6a_ complexed with gol, po4, zn

15. Mycobacterium tuberculosis [TaxId:1773] [229823] (1 PDB entry)

    • Domain for 4if2:

      • Domain d4if2a_: 4if2 A: [229824] automated match to d2vc7a_ complexed with zn

16. Novosphingobium aromaticivorans [TaxId:279238] [267952] (5 PDB entries)

    1. Domains for 4inf:

       1. Domain d4infa_: 4inf A: [266458] automated match to d3s4ta_ complexed with ca, cl, gol, oxd

       2. Domain d4infb_: 4inf B: [266459] automated match to d3s4ta_ complexed with ca, cl, gol, oxd

       3. Domain d4infc_: 4inf C: [266460] automated match to d3s4ta_ complexed with ca, cl, gol, oxd

       4. Domain d4infd_: 4inf D: [266461] automated match to d3s4ta_ complexed with ca, cl, gol, oxd

    2. Domains for 4qrn:

       1. Domain d4qrnb_: 4qrn B: [267339] automated match to d3s4ta_ complexed with 1df, act, cl, gol, mn

       2. Domain d4qrnc_: 4qrn C: [267340] automated match to d3s4ta_ complexed with 1df, act, cl, gol, mn

       3. Domain d4qrnd_: 4qrn D: [267341] automated match to d3s4ta_ complexed with 1df, act, cl, gol, mn

    3. Domains for 4qs5:

       1. Domain d4qs5a_: 4qs5 A: [267342] automated match to d3s4ta_ complexed with 1df, act, cl, gol, mn; mutant

       2. Domain d4qs5b_: 4qs5 B: [267343] automated match to d3s4ta_ complexed with 1df, act, cl, gol, mn; mutant

       3. Domain d4qs5c_: 4qs5 C: [267344] automated match to d3s4ta_ complexed with 1df, act, cl, gol, mn; mutant

       4. Domain d4qs5d_: 4qs5 D: [267345] automated match to d3s4ta_ complexed with 1df, act, cl, gol, mn; mutant

    4. Domains for 4qs6:

       1. Domain d4qs6a_: 4qs6 A: [267346] automated match to d3s4ta_ complexed with 1df, cl, gol; mutant

       2. Domain d4qs6b_: 4qs6 B: [267347] automated match to d3s4ta_ complexed with 1df, cl, gol; mutant

    5. Domains for 4qtg:

       1. Domain d4qtga_: 4qtg A: [267365] automated match to d3s4ta_ complexed with gol, mn

       2. Domain d4qtgb_: 4qtg B: [267366] automated match to d3s4ta_ complexed with gol, mn

17. Pseudomonas putida [TaxId:160488] [226114] (1 PDB entry)

    • Domain for 3rcm:

      • Domain d3rcma_: 3rcm A: [215722] automated match to d1xwya1 complexed with act, cit, zn

18. Salmonella typhimurium [TaxId:90371] [189010] (1 PDB entry)

    • Domains for 3iac:

      1. Domain d3iaca_: 3iac A: [178206] automated match to d1j5sa_ complexed with cl

      2. Domain d3iacb_: 3iac B: [178207] automated match to d1j5sa_ complexed with cl

      3. Domain d3iacc_: 3iac C: [178208] automated match to d1j5sa_ complexed with cl

19. Staphylococcus aureus [TaxId:196620] [187776] (1 PDB entry)

    • Domains for 2gzx:

      1. Domain d2gzxa_: 2gzx A: [164883] automated match to d1j6oa_ complexed with ni

      2. Domain d2gzxb_: 2gzx B: [164884] automated match to d1j6oa_ complexed with ni

20. Sulfolobus islandicus [TaxId:426118] [193063] (1 PDB entry)

    • Domain for 4g2d:

      • Domain d4g2da_: 4g2d A: [193064] automated match to d2vc7a_ complexed with co, fe2

21. Sulfolobus solfataricus [TaxId:2287] [188418] (10 PDB entries)

    1. Domains for 2vc5:

       1. Domain d2vc5a_: 2vc5 A: [168450] automated match to d2d2ga1 complexed with co, edo, fe, gol

       2. Domain d2vc5b_: 2vc5 B: [168451] automated match to d2d2ga1 complexed with co, edo, fe, gol

       3. Domain d2vc5c_: 2vc5 C: [168452] automated match to d2d2ga1 complexed with co, edo, fe, gol

       4. Domain d2vc5d_: 2vc5 D: [168453] automated match to d2d2ga1 complexed with co, edo, fe, gol

    2. Domains for 2vc7:

       1. Domain d2vc7a_: 2vc7 A: [168456] automated match to d2d2ga1 complexed with co, edo, fe, gol, ht5

       2. Domain d2vc7b_: 2vc7 B: [168457] automated match to d2d2ga1 complexed with co, edo, fe, gol, ht5

       3. Domain d2vc7c_: 2vc7 C: [168458] automated match to d2d2ga1 complexed with co, edo, fe, gol, ht5

       4. Domain d2vc7d_: 2vc7 D: [168459] automated match to d2d2ga1 complexed with co, edo, fe, gol, ht5

    3. Domains for 3uf9:

       1. Domain d3uf9a_: 3uf9 A: [193156] automated match to d2vc7a_ complexed with co, fe2, fst, gol

       2. Domain d3uf9b_: 3uf9 B: [193155] automated match to d2vc7a_ complexed with co, fe2, fst, gol

       3. Domain d3uf9c_: 3uf9 C: [200979] automated match to d2vc7a_ complexed with co, fe2, fst, gol

       4. Domain d3uf9d_: 3uf9 D: [200980] automated match to d2vc7a_ complexed with co, fe2, fst, gol

    4. Domains for 4ker:

       1. Domain d4kera_: 4ker A: [228062] automated match to d2vc7a_ complexed with co, edo, fe2, gol, peg

       2. Domain d4kerb_: 4ker B: [235147] automated match to d4kerd_ complexed with co, edo, fe2, gol, peg

       3. Domain d4kerc_: 4ker C: [235145] automated match to d4kerd_ complexed with co, edo, fe2, gol, peg

       4. Domain d4kerd_: 4ker D: [228061] automated match to d2vc7a_ complexed with co, edo, fe2, gol, peg

    5. Domains for 4kes:

       1. Domain d4kesa_: 4kes A: [235149] automated match to d4kesd_ complexed with co, edo, fe2, gol, peg

       2. Domain d4kesb_: 4kes B: [235148] automated match to d4kesd_ complexed with co, edo, fe2, gol, peg

       3. Domain d4kesc_: 4kes C: [235143] automated match to d4kesd_ complexed with co, edo, fe2, gol, peg

       4. Domain d4kesd_: 4kes D: [228060] automated match to d2vc7a_ complexed with co, edo, fe2, gol, peg

    6. Domains for 4ket:

       1. Domain d4keta_: 4ket A: [228059] automated match to d2vc7a_ complexed with co, edo, fe2, gol, peg, pg4

       2. Domain d4ketb_: 4ket B: [235146] automated match to d4ketd_ complexed with co, edo, fe2, gol, peg, pg4

       3. Domain d4ketc_: 4ket C: [235144] automated match to d4ketd_ complexed with co, edo, fe2, gol, peg, pg4

       4. Domain d4ketd_: 4ket D: [228058] automated match to d2vc7a_ complexed with co, edo, fe2, gol, peg, pg4

    7. Domains for 4keu:

       1. Domain d4keua_: 4keu A: [228057] automated match to d2vc7a_ complexed with co, edo, fe2, gol

       2. Domain d4keub_: 4keu B: [235150] automated match to d4keud_ complexed with co, edo, fe2, gol

       3. Domain d4keuc_: 4keu C: [235151] automated match to d4keud_ complexed with co, edo, fe2, gol

       4. Domain d4keud_: 4keu D: [228056] automated match to d2vc7a_ complexed with co, edo, fe2, gol

    8. Domains for 4kev:

       1. Domain d4keva_: 4kev A: [228064] automated match to d2vc7a_ complexed with co, fe2

       2. Domain d4kevb_: 4kev B: [235152] automated match to d4kevd_ complexed with co, fe2

       3. Domain d4kevc_: 4kev C: [235153] automated match to d4kevd_ complexed with co, fe2

       4. Domain d4kevd_: 4kev D: [228063] automated match to d2vc7a_ complexed with co, fe2

    9. Domains for 4kez:

       1. Domain d4keza_: 4kez A: [235155] automated match to d4kezd_ complexed with co, edo, fe2, gol

       2. Domain d4kezb_: 4kez B: [235156] automated match to d4kezd_ complexed with co, edo, fe2, gol

       3. Domain d4kezc_: 4kez C: [235154] automated match to d4kezd_ complexed with co, edo, fe2, gol

       4. Domain d4kezd_: 4kez D: [228066] automated match to d2vc7a_ complexed with co, edo, fe2, gol

    10. Domains for 4kf1:

        1. Domain d4kf1a_: 4kf1 A: [235157] automated match to d4ketd_ complexed with co, edo, fe2, gol, ht5, pg4

        2. Domain d4kf1b_: 4kf1 B: [235158] automated match to d4ketd_ complexed with co, edo, fe2, gol, ht5, pg4

        3. Domain d4kf1c_: 4kf1 C: [235159] automated match to d4ketd_ complexed with co, edo, fe2, gol, ht5, pg4

        4. Domain d4kf1d_: 4kf1 D: [235160] automated match to d4ketd_ complexed with co, edo, fe2, gol, ht5, pg4

22. Vulcanisaeta moutnovskia [TaxId:985053] [269342] (3 PDB entries)

    1. Domains for 4rdy:

       1. Domain d4rdya_: 4rdy A: [269346] automated match to d4g2da_ complexed with 3m5, co, gol, so4

       2. Domain d4rdyb_: 4rdy B: [269343] automated match to d4g2da_ complexed with 3m5, co, gol, so4

    2. Domains for 4rdz:

       1. Domain d4rdza_: 4rdz A: [269344] automated match to d4g2da_ complexed with co, gol, myr

       2. Domain d4rdzb_: 4rdz B: [269345] automated match to d4g2da_ complexed with co, gol, myr

    3. Domain for 4re0:

       • Domain d4re0a_: 4re0 A: [269347] automated match to d4g2da_ complexed with co, gol, myr, so4

More info for Protein automated matches from c.1.9.0: automated matches

Timeline for Protein automated matches from c.1.9.0: automated matches:

• Protein automated matches from c.1.9.0: automated matches first appeared in SCOPe 2.01
  
• Protein automated matches from c.1.9.0: automated matches appears in SCOPe 2.04
  
• Protein automated matches from c.1.9.0: automated matches appears in SCOPe 2.06
  
• Protein automated matches from c.1.9.0: automated matches appears in the current release, SCOPe 2.08