Lineage for Protein: automated matches

  1. Root: SCOPe 2.01
  2. 968085Class c: Alpha and beta proteins (a/b) [51349] (147 folds)
  3. 996821Fold c.56: Phosphorylase/hydrolase-like [53162] (8 superfamilies)
    core: 3 layers, a/b/a ; mixed sheet of 5 strands: order 21354; strand 4 is antiparallel to the rest; contains crossover loops
  4. 996837Superfamily c.56.2: Purine and uridine phosphorylases [53167] (2 families) (S)
    complex architecture; contains mixed beta-sheet of 8 strands, order 23415867, strands 3, 6 & 7 are antiparallel to the rest; and barrel, closed; n=5, S=8
  5. 996838Family c.56.2.1: Purine and uridine phosphorylases [53168] (7 proteins)
  6. 997377Protein automated matches [190142] (12 species)
    not a true protein

Species:

  1. 997378Aeropyrum pernix [TaxId:272557] [188092] (1 PDB entry)
  2. 997380Cow (Bos taurus) [TaxId:9913] [187265] (1 PDB entry)
  3. 997382Escherichia coli [TaxId:562] [186867] (2 PDB entries)
    1. Domains for 3df9:
      1. 997385Domain d3df9a_: 3df9 A: [173883]
        automated match to d1nc3a_
        complexed with df9
      2. 997386Domain d3df9b_: 3df9 B: [173884]
        automated match to d1nc3a_
        complexed with df9
    2. Domains for 3o4v:
      1. 997383Domain d3o4va_: 3o4v A: [182797]
        automated match to d1nc1a_
        complexed with 4ct, gol, ipa
      2. 997384Domain d3o4vb_: 3o4v B: [182798]
        automated match to d1nc1a_
        complexed with 4ct, gol, ipa
  4. 997387Mycobacterium tuberculosis [TaxId:1773] [189596] (1 PDB entry)
  5. 997390Plasmodium falciparum [TaxId:36329] [186993] (2 PDB entries)
    1. Domain for 2bsx:
    2. Domains for 3enz:
      1. 997391Domain d3enza_: 3enz A: [175108]
        automated match to d1nw4a_
        complexed with art, fmt, hpa, na, r1x
      2. 997392Domain d3enzb_: 3enz B: [175109]
        automated match to d1nw4a_
        complexed with art, fmt, hpa, na, r1x
      3. 997393Domain d3enzc_: 3enz C: [175110]
        automated match to d1nw4a_
        complexed with art, fmt, hpa, na, r1x
      4. 997394Domain d3enzd_: 3enz D: [175111]
        automated match to d1nw4a_
        complexed with art, fmt, hpa, na, r1x
      5. 997395Domain d3enze_: 3enz E: [175112]
        automated match to d1nw4a_
        complexed with art, fmt, hpa, na, r1x
      6. 997396Domain d3enzf_: 3enz F: [175113]
        automated match to d1nw4a_
        complexed with art, fmt, hpa, na, r1x
  6. 997398Plasmodium vivax [TaxId:5855] [188970] (1 PDB entry)
  7. 997400Salmonella typhimurium [TaxId:99287] [187772] (1 PDB entry)
  8. 997404Sulfolobus solfataricus [TaxId:2287] [187383] (1 PDB entry)
  9. 997417Trichomonas vaginalis [TaxId:5722] [187838] (9 PDB entries)
    1. Domain for 1z33:
    2. Domain for 1z34:
    3. Domain for 1z35:
    4. Domain for 1z36:
    5. Domain for 1z37:
    6. Domain for 1z38:
    7. Domain for 1z39:
    8. Domains for 2i4t:
      1. 997423Domain d2i4ta_: 2i4t A: [165390]
        automated match to d1a69a_
        complexed with po4, ua2
      2. 997424Domain d2i4tb_: 2i4t B: [165391]
        automated match to d1a69a_
        complexed with po4, ua2
      3. 997425Domain d2i4tc_: 2i4t C: [165392]
        automated match to d1a69a_
        complexed with po4, ua2
    9. Domains for 2isc:
      1. 997427Domain d2isca_: 2isc A: [165664]
        automated match to d1a69a_
        complexed with 223, po4
      2. 997428Domain d2iscb_: 2isc B: [165665]
        automated match to d1a69a_
        complexed with 223, po4
      3. 997429Domain d2iscc_: 2isc C: [165666]
        automated match to d1a69a_
        complexed with 223, po4
      4. 997430Domain d2iscd_: 2isc D: [165667]
        automated match to d1a69a_
        complexed with 223, po4
      5. 997431Domain d2isce_: 2isc E: [165668]
        automated match to d1a69a_
        complexed with 223, po4
      6. 997432Domain d2iscf_: 2isc F: [165669]
        automated match to d1a69a_
        complexed with 223, po4
  10. 997434Vibrio cholerae [TaxId:243277] [189490] (2 PDB entries)
    1. Domains for 3o6v:
      1. 997435Domain d3o6va_: 3o6v A: [182845]
        automated match to d1k3fa_
        complexed with fmt, gol
      2. 997436Domain d3o6vb_: 3o6v B: [182846]
        automated match to d1k3fa_
        complexed with fmt, gol
    2. Domains for 3pns:
      1. 997437Domain d3pnsa_: 3pns A: [183888]
        automated match to d1k3fa_
        complexed with acy, cl, fmt, gol, so4, ura
      2. 997438Domain d3pnsb_: 3pns B: [183889]
        automated match to d1k3fa_
        complexed with acy, cl, fmt, gol, so4, ura
      3. 997439Domain d3pnsc_: 3pns C: [183890]
        automated match to d1k3fa_
        complexed with acy, cl, fmt, gol, so4, ura
      4. 997440Domain d3pnsd_: 3pns D: [183891]
        automated match to d1k3fa_
        complexed with acy, cl, fmt, gol, so4, ura
      5. 997441Domain d3pnse_: 3pns E: [183892]
        automated match to d1k3fa_
        complexed with acy, cl, fmt, gol, so4, ura
      6. 997442Domain d3pnsf_: 3pns F: [183893]
        automated match to d1k3fa_
        complexed with acy, cl, fmt, gol, so4, ura
      7. 997443Domain d3pnsg_: 3pns G: [183894]
        automated match to d1k3fa_
        complexed with acy, cl, fmt, gol, so4, ura
      8. 997444Domain d3pnsh_: 3pns H: [183895]
        automated match to d1k3fa_
        complexed with acy, cl, fmt, gol, so4, ura
      9. 997445Domain d3pnsi_: 3pns I: [183896]
        automated match to d1k3fa_
        complexed with acy, cl, fmt, gol, so4, ura
      10. 997446Domain d3pnsj_: 3pns J: [183897]
        automated match to d1k3fa_
        complexed with acy, cl, fmt, gol, so4, ura
      11. 997447Domain d3pnsk_: 3pns K: [183898]
        automated match to d1k3fa_
        complexed with acy, cl, fmt, gol, so4, ura
      12. 997448Domain d3pnsl_: 3pns L: [183899]
        automated match to d1k3fa_
        complexed with acy, cl, fmt, gol, so4, ura
  11. 997449Vibrio cholerae [TaxId:666] [188799] (2 PDB entries)
    1. Domains for 3dp9:
      1. 997462Domain d3dp9a_: 3dp9 A: [174146]
        automated match to d1jysa_
        complexed with big, iod
      2. 997463Domain d3dp9c_: 3dp9 C: [174147]
        automated match to d1jysa_
        complexed with big, iod
    2. Domains for 3of3:
      1. 997450Domain d3of3a_: 3of3 A: [182976]
        automated match to d1vhja_
        complexed with dih, po4
      2. 997451Domain d3of3b_: 3of3 B: [182977]
        automated match to d1vhja_
        complexed with dih, po4
      3. 997452Domain d3of3c_: 3of3 C: [182978]
        automated match to d1vhja_
        complexed with dih, po4
      4. 997453Domain d3of3d_: 3of3 D: [182979]
        automated match to d1vhja_
        complexed with dih, po4
      5. 997454Domain d3of3e_: 3of3 E: [182980]
        automated match to d1vhja_
        complexed with dih, po4
      6. 997455Domain d3of3f_: 3of3 F: [182981]
        automated match to d1vhja_
        complexed with dih, po4
      7. 997456Domain d3of3g_: 3of3 G: [182982]
        automated match to d1vhja_
        complexed with dih, po4
      8. 997457Domain d3of3h_: 3of3 H: [182983]
        automated match to d1vhja_
        complexed with dih, po4
      9. 997458Domain d3of3i_: 3of3 I: [182984]
        automated match to d1vhja_
        complexed with dih, po4
      10. 997459Domain d3of3j_: 3of3 J: [182985]
        automated match to d1vhja_
        complexed with dih, po4
      11. 997460Domain d3of3k_: 3of3 K: [182986]
        automated match to d1vhja_
        complexed with dih, po4
      12. 997461Domain d3of3l_: 3of3 L: [182987]
        automated match to d1vhja_
        complexed with dih, po4
  12. 997464Yersinia pseudotuberculosis [TaxId:502800] [189524] (1 PDB entry)

More info for Protein automated matches from c.56.2.1: Purine and uridine phosphorylases

Timeline for Protein automated matches from c.56.2.1: Purine and uridine phosphorylases:

  • Protein automated matches from c.56.2.1: Purine and uridine phosphorylases is new in SCOPe 2.01-stable
  • Protein automated matches from c.56.2.1: Purine and uridine phosphorylases appears in SCOPe 2.02
  • Protein automated matches from c.56.2.1: Purine and uridine phosphorylases appears in the current release, SCOPe 2.08