Lineage for Protein: automated matches

  1. Root: SCOPe 2.02
  2. 1143363Class c: Alpha and beta proteins (a/b) [51349] (147 folds)
  3. 1185373Fold c.94: Periplasmic binding protein-like II [53849] (1 superfamily)
    consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
    mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest
  4. 1185374Superfamily c.94.1: Periplasmic binding protein-like II [53850] (4 families) (S)
    Similar in architecture to the superfamily I but partly differs in topology
  5. 1185375Family c.94.1.1: Phosphate binding protein-like [53851] (41 proteins)
  6. 1186093Protein automated matches [190140] (9 species)
    not a true protein

Species:

  1. 1186094Bordetella pertussis [TaxId:257313] [187275] (2 PDB entries)
    1. Domain for 2ows:
    2. Domain for 2owt:
  2. 1186097Burkholderia sp. [TaxId:233098] [190010] (3 PDB entries)
    1. Domain for 2y7p:
    2. Domains for 2y7r:
      1. 1186100Domain d2y7ra_: 2y7r A: [170670]
        automated match to d1utba_
      2. 1186101Domain d2y7rb_: 2y7r B: [170671]
        automated match to d1utba_
      3. 1186102Domain d2y7rc_: 2y7r C: [170672]
        automated match to d1utba_
      4. 1186103Domain d2y7rd_: 2y7r D: [170673]
        automated match to d1utba_
      5. 1186104Domain d2y7re_: 2y7r E: [170674]
        automated match to d1utba_
      6. 1186105Domain d2y7rf_: 2y7r F: [170675]
        automated match to d1utba_
      7. 1186106Domain d2y7rg_: 2y7r G: [170676]
        automated match to d1utba_
      8. 1186107Domain d2y7rh_: 2y7r H: [170677]
        automated match to d1utba_
    3. Domain for 2y84:
  3. 1186108Escherichia coli K-12 [TaxId:83333] [189211] (10 PDB entries)
    1. Domains for 3axf:
      1. 1186122Domain d3axfa_: 3axf A: [172370]
        automated match to d1amfa_
        complexed with reo; mutant
      2. 1186123Domain d3axfb_: 3axf B: [172371]
        automated match to d1amfa_
        complexed with reo; mutant
      3. 1186124Domain d3axfc_: 3axf C: [172372]
        automated match to d1amfa_
        complexed with reo; mutant
    2. Domains for 3hpi:
      1. 1186120Domain d3hpia_: 3hpi A: [177758]
        automated match to d1anfa_
        complexed with act, suc, zn; mutant
      2. 1186121Domain d3hpib_: 3hpi B: [177759]
        automated match to d1anfa_
        complexed with act, suc, zn; mutant
    3. Domain for 3kjt:
    4. Domain for 3puv:
    5. Domain for 3pux:
    6. Domain for 3r26:
    7. Domain for 3rlf:
    8. Domains for 3tcf:
      1. 1186125Domain d3tcfa_: 3tcf A: [185748]
        automated match to d1b05a_
      2. 1186126Domain d3tcfb_: 3tcf B: [185749]
        automated match to d1b05a_
      3. 1186127Domain d3tcfc_: 3tcf C: [185750]
        automated match to d1b05a_
      4. 1186128Domain d3tcfd_: 3tcf D: [185751]
        automated match to d1b05a_
      5. 1186129Domain d3tcfe_: 3tcf E: [185752]
        automated match to d1b05a_
      6. 1186130Domain d3tcff_: 3tcf F: [185753]
        automated match to d1b05a_
      7. 1186131Domain d3tcfg_: 3tcf G: [185754]
        automated match to d1b05a_
      8. 1186132Domain d3tcfh_: 3tcf H: [185755]
        automated match to d1b05a_
    9. Domains for 3tcg:
      1. 1186112Domain d3tcga_: 3tcg A: [185756]
        automated match to d1b05a_
      2. 1186113Domain d3tcgb_: 3tcg B: [185757]
        automated match to d1b05a_
      3. 1186114Domain d3tcgc_: 3tcg C: [185758]
        automated match to d1b05a_
      4. 1186115Domain d3tcgd_: 3tcg D: [185759]
        automated match to d1b05a_
      5. 1186116Domain d3tcge_: 3tcg E: [185760]
        automated match to d1b05a_
      6. 1186117Domain d3tcgf_: 3tcg F: [185761]
        automated match to d1b05a_
      7. 1186118Domain d3tcgg_: 3tcg G: [185762]
        automated match to d1b05a_
      8. 1186119Domain d3tcgh_: 3tcg H: [185763]
        automated match to d1b05a_
    10. Domain for 3tch:
  4. 1186136Escherichia coli [TaxId:562] [189978] (3 PDB entries)
    1. Domain for 3q25:
    2. Domain for 3q27:
    3. Domains for 3q29:
      1. 1186139Domain d3q29a_: 3q29 A: [184165]
        automated match to d1a7la_
        complexed with gol, mal, so4
      2. 1186140Domain d3q29c_: 3q29 C: [184166]
        automated match to d1a7la_
        complexed with gol, mal, so4
  5. 1186141Human (Homo sapiens) [TaxId:9606] [189406] (2 PDB entries)
    1. Domains for 2xhd:
      1. 1186142Domain d2xhda_: 2xhd A: [170092]
        automated match to d1lbcb_
        complexed with 7t9, glu, so4
      2. 1186143Domain d2xhdb_: 2xhd B: [170093]
        automated match to d1lbcb_
        complexed with 7t9, glu, so4
    2. Domains for 3r7x:
      1. 1186144Domain d3r7xa_: 3r7x A: [184838]
        automated match to d1mm6a_
        complexed with glu, qsn
      2. 1186145Domain d3r7xb_: 3r7x B: [184839]
        automated match to d1mm6a_
        complexed with glu, qsn
  6. 1186146Norway rat (Rattus norvegicus) [TaxId:10116] [189278] (22 PDB entries)
    1. Domains for 2uxa:
      1. 1186174Domain d2uxaa_: 2uxa A: [168209]
        automated match to d1lb8a_
        complexed with glu, zn
      2. 1186175Domain d2uxab_: 2uxa B: [168210]
        automated match to d1lb8a_
        complexed with glu, zn
      3. 1186176Domain d2uxac_: 2uxa C: [168211]
        automated match to d1lb8a_
        complexed with glu, zn
    2. Domain for 3dln:
    3. Domain for 3dp4:
    4. Domain for 3en3:
    5. Domains for 3epe:
      1. 1186160Domain d3epea_: 3epe A: [175143]
        automated match to d1ftja_
        complexed with glu
      2. 1186161Domain d3epeb_: 3epe B: [175144]
        automated match to d1ftja_
        complexed with glu
    6. Domains for 3fas:
      1. 1186147Domain d3fasa_: 3fas A: [175617]
        automated match to d1mm6a_
        complexed with glu, gol, so4
      2. 1186148Domain d3fasb_: 3fas B: [175618]
        automated match to d1mm6a_
        complexed with glu, gol, so4
    7. Domains for 3fat:
      1. 1186157Domain d3fata_: 3fat A: [175619]
        automated match to d1mm6a_
        complexed with acy, amq, gol, so4
      2. 1186158Domain d3fatb_: 3fat B: [175620]
        automated match to d1mm6a_
        complexed with acy, amq, gol, so4
      3. 1186159Domain d3fatc_: 3fat C: [175621]
        automated match to d1mm6a_
        complexed with acy, amq, gol, so4
    8. Domains for 3kei:
      1. 1186163Domain d3keia_: 3kei A: [179304]
        automated match to d1lbca_
        complexed with glu; mutant
      2. 1186164Domain d3keib_: 3kei B: [179305]
        automated match to d1lbca_
        complexed with glu; mutant
    9. Domain for 3kfm:
    10. Domain for 3lsw:
    11. Domain for 3lsx:
    12. Domain for 3m3f:
    13. Domains for 3m3k:
      1. 1186154Domain d3m3ka_: 3m3k A: [180794]
        automated match to d1m5da_
        complexed with glu, zn
      2. 1186155Domain d3m3kc_: 3m3k C: [180795]
        automated match to d1m5da_
        complexed with glu, zn
      3. 1186156Domain d3m3ke_: 3m3k E: [180796]
        automated match to d1m5da_
        complexed with glu, zn
    14. Domain for 3rt6:
    15. Domain for 3rt8:
    16. Domains for 4f1y:
      1. 1186151Domain d4f1ya_: 4f1y A: [195369]
        automated match to d3m3ka_
        complexed with cni, zn
      2. 1186152Domain d4f1yc_: 4f1y C: [195368]
        automated match to d3m3ka_
        complexed with cni, zn
    17. Domain for 4f22:
    18. Domain for 4f2q:
    19. Domains for 4f31:
      1. 1186172Domain d4f31b_: 4f31 B: [195272]
        automated match to d3m3ka_
        complexed with kai, zn; mutant
      2. 1186173Domain d4f31d_: 4f31 D: [195277]
        automated match to d3m3ka_
        complexed with kai, zn; mutant
    20. Domain for 4f39:
    21. Domain for 4f3b:
    22. Domain for 4f3g:
  7. 1186180Pseudomonas aeruginosa [TaxId:287] [195694] (2 PDB entries)
    1. Domains for 3ttk:
      1. 1186183Domain d3ttkb_: 3ttk B: [195696]
        automated match to d1a99a_
      2. 1186184Domain d3ttkc_: 3ttk C: [195695]
        automated match to d1a99a_
    2. Domains for 3ttm:
      1. 1186181Domain d3ttma_: 3ttm A: [195698]
        automated match to d1a99a_
        complexed with put
      2. 1186182Domain d3ttmb_: 3ttm B: [195697]
        automated match to d1a99a_
        complexed with put
  8. 1186185Sphingomonas sp. [TaxId:90322] [186866] (5 PDB entries)
    1. Domain for 1y3p:
    2. Domain for 1y3q:
    3. Domain for 3vlu:
    4. Domain for 3vlv:
    5. Domains for 3vlw:
      1. 1186189Domain d3vlwa_: 3vlw A: [186515]
        automated match to d1j1na_
        complexed with ca, gol
      2. 1186190Domain d3vlwb_: 3vlw B: [186516]
        automated match to d1j1na_
        complexed with ca, gol
  9. 1186192Yersinia pestis [TaxId:214092] [188272] (2 PDB entries)
    1. Domains for 2z22:
      1. 1186193Domain d2z22a_: 2z22 A: [170991]
        automated match to d1ixha_
        complexed with po4
      2. 1186194Domain d2z22x_: 2z22 X: [170992]
        automated match to d1ixha_
        complexed with po4
    2. Domain for 2z23:

More info for Protein automated matches from c.94.1.1: Phosphate binding protein-like

Timeline for Protein automated matches from c.94.1.1: Phosphate binding protein-like: