Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 2015621Fold a.133: Phospholipase A2, PLA2 [48618] (1 superfamily)
    common core: 2 helices, disulfide-linked, and a calcium-binding loop
  4. 2015622Superfamily a.133.1: Phospholipase A2, PLA2 [48619] (4 families) (S)
  5. 2015627Family a.133.1.2: Vertebrate phospholipase A2 [48623] (3 proteins)
    automatically mapped to Pfam PF00068
  6. 2015999Protein automated matches [190139] (26 species)
    not a true protein

Species:

  1. 2016000Atropoides nummifer [TaxId:44730] [187413] (1 PDB entry)
  2. 2016002Bothrops asper [TaxId:8722] [339854] (1 PDB entry)
  3. 2016005Bothrops brazili [TaxId:157546] [195180] (2 PDB entries)
    1. Domains for 4dcf:
      1. 2016008Domain d4dcfa_: 4dcf A: [195185]
        automated match to d1xxsa_
        complexed with pg4
      2. 2016009Domain d4dcfb_: 4dcf B: [195183]
        automated match to d1xxsa_
        complexed with pg4
      3. 2016010Domain d4dcfc_: 4dcf C: [195181]
        automated match to d1xxsa_
        complexed with pg4
      4. 2016011Domain d4dcfd_: 4dcf D: [195184]
        automated match to d1xxsa_
        complexed with pg4
    2. Domains for 4k09:
      1. 2016006Domain d4k09a_: 4k09 A: [229105]
        automated match to d3i03a_
      2. 2016007Domain d4k09b_: 4k09 B: [229106]
        automated match to d3i03a_
  4. 2016012Bothrops moojeni [TaxId:98334] [188126] (4 PDB entries)
    1. Domains for 1xxs:
      1. 2016013Domain d1xxsa_: 1xxs A: [162122]
        automated match to d1clpa_
        complexed with so4, ste
      2. 2016014Domain d1xxsb_: 1xxs B: [162123]
        automated match to d1clpa_
        complexed with so4, ste
    2. Domains for 3t0r:
      1. 2016019Domain d3t0ra_: 3t0r A: [194872]
        automated match to d2q2ja_
        complexed with pe4
      2. 2016020Domain d3t0rb_: 3t0r B: [194871]
        automated match to d2q2ja_
        complexed with pe4
      3. 2016021Domain d3t0rc_: 3t0r C: [194870]
        automated match to d2q2ja_
        complexed with pe4
      4. 2016022Domain d3t0rd_: 3t0r D: [194873]
        automated match to d2q2ja_
        complexed with pe4
    3. Domains for 4kf3:
      1. 2016015Domain d4kf3a_: 4kf3 A: [224281]
        automated match to d1xxsa_
        complexed with ipa, pe4
      2. 2016016Domain d4kf3b_: 4kf3 B: [224282]
        automated match to d1xxsa_
        complexed with ipa, pe4
    4. Domains for 4yv5:
      1. 2016017Domain d4yv5a_: 4yv5 A: [278229]
        automated match to d4kf3a_
        complexed with 1pe, pe4, so4, svr
      2. 2016018Domain d4yv5b_: 4yv5 B: [278230]
        automated match to d4kf3a_
        complexed with 1pe, pe4, so4, svr
  5. 2016023Bothrops pirajai [TaxId:113192] [188615] (4 PDB entries)
    1. Domains for 2ok9:
      1. 2016030Domain d2ok9a_: 2ok9 A: [166726]
        automated match to d1qlla_
        complexed with ipa, pbp
      2. 2016031Domain d2ok9b_: 2ok9 B: [166727]
        automated match to d1qlla_
        complexed with ipa, pbp
    2. Domains for 3qnl:
      1. 2016024Domain d3qnla_: 3qnl A: [191943]
        automated match to d2ok9a_
        complexed with ipa, p33, roa
      2. 2016025Domain d3qnlb_: 3qnl B: [191944]
        automated match to d2ok9a_
        complexed with ipa, p33, roa
    3. Domains for 4yu7:
      1. 2016026Domain d4yu7a_: 4yu7 A: [275759]
        automated match to d3qnla_
        complexed with dhc, pe4, so4
      2. 2016027Domain d4yu7b_: 4yu7 B: [275756]
        automated match to d3qnla_
        complexed with dhc, pe4, so4
    4. Domains for 4yz7:
      1. 2016028Domain d4yz7a_: 4yz7 A: [275763]
        automated match to d3qnla_
        complexed with 9ar, pe4, so4
      2. 2016029Domain d4yz7b_: 4yz7 B: [275762]
        automated match to d3qnla_
        complexed with 9ar, pe4, so4
  6. 2016032Bungarus caeruleus [TaxId:132961] [187166] (1 PDB entry)
  7. 2016034Chinese cobra (Naja atra) [TaxId:8656] [187966] (1 PDB entry)
  8. 2016036Crotalus durissus [TaxId:8732] [188410] (2 PDB entries)
    1. Domains for 2qog:
      1. 2016038Domain d2qoga_: 2qog A: [167741]
        automated match to d1bjja_
        complexed with ca
      2. 2016039Domain d2qogb_: 2qog B: [167742]
        automated match to d1a2aa_
        complexed with ca
      3. 2016040Domain d2qogc_: 2qog C: [167743]
        automated match to d1a2aa_
        complexed with ca
      4. 2016041Domain d2qogd_: 2qog D: [167744]
        automated match to d1bjja_
        complexed with ca
    2. Domain for 3r0l:
  9. 2016042Daboia russelli [TaxId:97228] [188715] (1 PDB entry)
  10. 2016044Daboia russellii [TaxId:31159] [188906] (1 PDB entry)
  11. 2016046Daboia russellii [TaxId:343250] [187787] (1 PDB entry)
  12. 2016055Daboia russellii [TaxId:97228] [186865] (27 PDB entries)
    1. Domains for 1y38:
      1. 2016075Domain d1y38a_: 1y38 A: [122580]
        automated match to d1tgma_
        complexed with g3p, na, pge, so4
      2. 2016076Domain d1y38b_: 1y38 B: [122581]
        automated match to d1tgma_
        complexed with g3p, na, pge, so4
    2. Domain for 1zr8:
    3. Domain for 1zwp:
    4. Domain for 1zyx:
    5. Domain for 2arm:
    6. Domain for 2b17:
    7. Domain for 2dpz:
    8. Domain for 2fnx:
    9. Domain for 2g58:
    10. Domain for 2o1n:
    11. Domain for 2oli:
    12. Domain for 2otf:
    13. Domain for 2oth:
    14. Domain for 2oub:
    15. Domain for 2oyf:
    16. Domain for 2pb8:
    17. Domain for 2pmj:
    18. Domain for 2pvt:
    19. Domain for 2pws:
    20. Domain for 2pyc:
    21. Domain for 2q1p:
    22. Domain for 2qhw:
    23. Domain for 2qu9:
    24. Domain for 2que:
    25. Domain for 2qvd:
    26. Domain for 2zbh:
    27. Domains for 3cbi:
      1. 2016083Domain d3cbia_: 3cbi A: [156155]
        automated match to d1tjka_
        protein/RNA complex; complexed with ajm, ann
      2. 2016084Domain d3cbib_: 3cbi B: [156156]
        automated match to d1tjka_
        protein/RNA complex; complexed with ajm, ann
      3. 2016085Domain d3cbic_: 3cbi C: [156157]
        automated match to d1tjka_
        protein/RNA complex; complexed with ajm, ann
      4. 2016086Domain d3cbid_: 3cbi D: [156158]
        automated match to d1tjka_
        protein/RNA complex; complexed with ajm, ann
  13. 2016087Halys viper (Agkistrodon halys) [TaxId:8714] [194477] (1 PDB entry)
  14. 2016092Human (Homo sapiens) [TaxId:9606] [260458] (2 PDB entries)
    1. Domains for 4uy1:
      1. 2016095Domain d4uy1a_: 4uy1 A: [260459]
        automated match to d1le6a_
        complexed with 1pe, ca, dms, peg, tjm
      2. 2016096Domain d4uy1b_: 4uy1 B: [260839]
        automated match to d1le6a_
        complexed with 1pe, ca, dms, peg, tjm
    2. Domains for 5g3n:
      1. 2016093Domain d5g3na1: 5g3n A:1-124 [322528]
        Other proteins in same PDB: d5g3na2, d5g3nb2
        automated match to d1n29a_
        complexed with ca, fmt, x28
      2. 2016094Domain d5g3nb1: 5g3n B:1-124 [322574]
        Other proteins in same PDB: d5g3na2, d5g3nb2
        automated match to d1n29a_
        complexed with ca, fmt, x28
  15. 2016097Indian cobra (Naja naja) [TaxId:35670] [189291] (2 PDB entries)
    1. Domain for 1lff:
    2. Domain for 2wq5:
  16. 2016100Jararacussu (Bothrops jararacussu) [TaxId:8726] [186913] (7 PDB entries)
    1. Domains for 1z76:
      1. 2016105Domain d1z76a_: 1z76 A: [162394]
        automated match to d1u73a_
        complexed with pbp
      2. 2016106Domain d1z76b_: 1z76 B: [162395]
        automated match to d1u73a_
        complexed with pbp
    2. Domain for 1zl7:
    3. Domain for 1zlb:
    4. Domains for 2h8i:
      1. 2016107Domain d2h8ia_: 2h8i A: [165008]
        automated match to d1pa0a_
        complexed with peg
      2. 2016108Domain d2h8ib_: 2h8i B: [165009]
        automated match to d1pa0a_
        complexed with peg
    5. Domains for 2oqd:
      1. 2016111Domain d2oqda_: 2oqd A: [166824]
        automated match to d1gmza_
      2. 2016112Domain d2oqdb_: 2oqd B: [166825]
        automated match to d1gmza_
    6. Domains for 3iq3:
      1. 2016102Domain d3iq3a_: 3iq3 A: [178519]
        automated match to d1pa0a_
        complexed with pe4, so4
      2. 2016103Domain d3iq3b_: 3iq3 B: [178520]
        automated match to d1pa0a_
        complexed with pe4, so4
    7. Domains for 3jr8:
      1. 2016109Domain d3jr8a_: 3jr8 A: [178718]
        automated match to d1gmza_
        complexed with ca
      2. 2016110Domain d3jr8b_: 3jr8 B: [178719]
        automated match to d1gmza_
        complexed with ca
  17. 2016113Micropechis ikaheka [TaxId:66188] [188000] (1 PDB entry)
  18. 2016118Naja sagittifera [TaxId:195058] [188129] (2 PDB entries)
    1. Domains for 1y75:
      1. 2016120Domain d1y75a_: 1y75 A: [162166]
        automated match to d1owsa_
        complexed with nag, zn
      2. 2016121Domain d1y75b_: 1y75 B: [162167]
        automated match to d1owsb_
        complexed with nag, zn
    2. Domain for 1yxh:
  19. 2016122Pig (Sus scrofa) [TaxId:9823] [186957] (9 PDB entries)
    1. Domain for 2azy:
    2. Domains for 3fvi:
      1. 2016131Domain d3fvia_: 3fvi A: [176076]
        automated match to d1hn4a_
        complexed with ca, cl, na, osf
      2. 2016132Domain d3fvib_: 3fvi B: [176077]
        automated match to d1hn4a_
        complexed with ca, cl, na, osf
      3. 2016133Domain d3fvic_: 3fvi C: [176078]
        automated match to d1hn4a_
        complexed with ca, cl, na, osf
      4. 2016134Domain d3fvid_: 3fvi D: [176079]
        automated match to d1hn4a_
        complexed with ca, cl, na, osf
    3. Domain for 3fvj:
    4. Domain for 3hsw:
    5. Domain for 3l30:
    6. Domain for 3o4m:
    7. Domain for 3qlm:
    8. Domain for 4dbk:
    9. Domain for 4g5i:
  20. 2016135Pseudechis australis [TaxId:8670] [193996] (1 PDB entry)
  21. 2016138Saw-scaled viper (Echis carinatus) [TaxId:40353] [188231] (4 PDB entries)
    1. Domains for 2qhd:
      1. 2016140Domain d2qhda_: 2qhd A: [167595]
        automated match to d1cl5a_
        complexed with dao
      2. 2016141Domain d2qhdb_: 2qhd B: [167596]
        automated match to d1cl5a_
        complexed with dao
    2. Domain for 2qhe:
    3. Domains for 2qhg:
      1. 2016142Domain d2qhga_: 2qhg A: [304410]
        automated match to d2qhea_
        complexed with svr
      2. 2016143Domain d2qhgb_: 2qhg B: [304411]
        automated match to d2qhea_
        complexed with svr
      3. 2016144Domain d2qhgc_: 2qhg C: [304412]
        automated match to d2qhea_
        complexed with svr
      4. 2016145Domain d2qhgd_: 2qhg D: [304413]
        automated match to d2qhea_
        complexed with svr
      5. 2016146Domain d2qhge_: 2qhg E: [304414]
        automated match to d2qhea_
        complexed with svr
      6. 2016147Domain d2qhgf_: 2qhg F: [304415]
        automated match to d2qhea_
        complexed with svr
      7. 2016148Domain d2qhgg_: 2qhg G: [304416]
        automated match to d2qhea_
        complexed with svr
      8. 2016149Domain d2qhgh_: 2qhg H: [304417]
        automated match to d2qhea_
        complexed with svr
    4. Domains for 3bjw:
      1. 2016150Domain d3bjwa_: 3bjw A: [172669]
        automated match to d1cl5a_
        complexed with svr
      2. 2016151Domain d3bjwb_: 3bjw B: [172670]
        automated match to d1cl5a_
        complexed with svr
      3. 2016152Domain d3bjwc_: 3bjw C: [172671]
        automated match to d1cl5a_
        complexed with svr
      4. 2016153Domain d3bjwd_: 3bjw D: [172672]
        automated match to d1cl5a_
        complexed with svr
      5. 2016154Domain d3bjwe_: 3bjw E: [172673]
        automated match to d1cl5a_
        complexed with svr
      6. 2016155Domain d3bjwf_: 3bjw F: [172674]
        automated match to d1cl5a_
        complexed with svr
      7. 2016156Domain d3bjwg_: 3bjw G: [172675]
        automated match to d1cl5a_
        complexed with svr
      8. 2016157Domain d3bjwh_: 3bjw H: [172676]
        automated match to d1cl5a_
        complexed with svr
  22. 2016158Vipera ammodytes [TaxId:73841] [195494] (1 PDB entry)
  23. 2016167Vipera ammodytes [TaxId:8705] [188519] (3 PDB entries)
    1. Domain for 3dih:
    2. Domain for 3g8g:
    3. Domain for 3g8h:
  24. 2016171Vipera nikolskii [TaxId:110206] [187834] (1 PDB entry)
  25. 2016174Viridovipera stejnegeri [TaxId:39682] [194681] (3 PDB entries)
    1. Domains for 4h0q:
      1. 2016178Domain d4h0qa_: 4h0q A: [307482]
        automated match to d4rfpa_
        complexed with peg
      2. 2016179Domain d4h0qb_: 4h0q B: [307483]
        automated match to d4rfpa_
        complexed with peg
    2. Domains for 4h0s:
      1. 2016175Domain d4h0sa_: 4h0s A: [222308]
        automated match to d1jiaa_
        complexed with na
      2. 2016176Domain d4h0sb_: 4h0s B: [222309]
        automated match to d1jiaa_
        complexed with na
      3. 2016177Domain d4h0sc_: 4h0s C: [222310]
        automated match to d1jiaa_
        complexed with na
    3. Domains for 4rfp:
      1. 2016180Domain d4rfpa_: 4rfp A: [263862]
        complexed with peg
      2. 2016181Domain d4rfpb_: 4rfp B: [260426]
        automated match to d4h0qa_
        complexed with peg
  26. 2016182Zhaoermia mangshanensis [TaxId:242058] [188379] (1 PDB entry)

More info for Protein automated matches from a.133.1.2: Vertebrate phospholipase A2

Timeline for Protein automated matches from a.133.1.2: Vertebrate phospholipase A2: