Lineage for Protein: automated matches

  1. Root: SCOPe 2.04
  2. 1473060Class a: All alpha proteins [46456] (285 folds)
  3. 1489461Fold a.39: EF Hand-like [47472] (4 superfamilies)
    core: 4 helices; array of 2 hairpins, opened
  4. 1489462Superfamily a.39.1: EF-hand [47473] (12 families) (S)
    Duplication: consists of two EF-hand units: each is made of two helices connected with calcium-binding loop
  5. 1489488Family a.39.1.2: S100 proteins [47478] (2 proteins)
    dimer: subunits are made of two EF-hands
  6. 1489693Protein automated matches [190132] (3 species)
    not a true protein

Species:

  1. 1489694Cow (Bos taurus) [TaxId:9913] [193459] (1 PDB entry)
  2. 1489696Human (Homo sapiens) [TaxId:9606] [187203] (33 PDB entries)
    1. Domains for 2h61:
      1. 1489732Domain d2h61a_: 2h61 A: [136169]
        automated match to d1mq1a_
        complexed with ca, pg4
      2. 1489733Domain d2h61b_: 2h61 B: [136170]
        automated match to d1mq1a_
        complexed with ca, pg4
      3. 1489734Domain d2h61c_: 2h61 C: [136171]
        automated match to d1mq1a_
        complexed with ca, pg4
      4. 1489735Domain d2h61d_: 2h61 D: [136172]
        automated match to d1mq1a_
        complexed with ca, pg4
      5. 1489736Domain d2h61e_: 2h61 E: [136173]
        automated match to d1mq1a_
        complexed with ca, pg4
      6. 1489737Domain d2h61f_: 2h61 F: [136174]
        automated match to d1mq1a_
        complexed with ca, pg4
      7. 1489738Domain d2h61g_: 2h61 G: [136175]
        automated match to d1mq1a_
        complexed with ca, pg4
      8. 1489739Domain d2h61h_: 2h61 H: [136176]
        automated match to d1mq1a_
        complexed with ca, pg4
    2. Domains for 2l0p:
      1. 1489768Domain d2l0pa_: 2l0p A: [242722]
        automated match to d1k2ha_
      2. 1489769Domain d2l0pb_: 2l0p B: [242723]
        automated match to d1k2ha_
    3. Domains for 2lhl:
      1. 1489762Domain d2lhla_: 2lhl A: [242887]
        automated match to d1k2ha_
        mutant
      2. 1489763Domain d2lhlb_: 2lhl B: [242888]
        automated match to d1k2ha_
        mutant
    4. Domains for 2lls:
      1. 1489764Domain d2llsa_: 2lls A: [242925]
        automated match to d1k2ha_
      2. 1489765Domain d2llsb_: 2lls B: [242926]
        automated match to d1k2ha_
    5. Domains for 2llt:
      1. 1489766Domain d2llta_: 2llt A: [242927]
        automated match to d1k2ha_
      2. 1489767Domain d2lltb_: 2llt B: [242928]
        automated match to d1k2ha_
    6. Domains for 2llu:
      1. 1489772Domain d2llua_: 2llu A: [242929]
        automated match to d1k2ha_
      2. 1489773Domain d2llub_: 2llu B: [242930]
        automated match to d1k2ha_
    7. Domains for 2lp2:
      1. 1489758Domain d2lp2a_: 2lp2 A: [242954]
        automated match to d1k2ha_
        complexed with ca, hcs
      2. 1489759Domain d2lp2b_: 2lp2 B: [242955]
        automated match to d1k2ha_
        complexed with ca, hcs
    8. Domains for 2lp3:
      1. 1489754Domain d2lp3a_: 2lp3 A: [242956]
        automated match to d1k2ha_
        complexed with ca
      2. 1489755Domain d2lp3b_: 2lp3 B: [242957]
        automated match to d1k2ha_
        complexed with ca
    9. Domains for 2luc:
      1. 1489770Domain d2luca_: 2luc A: [242995]
        automated match to d1nsha_
      2. 1489771Domain d2lucb_: 2luc B: [242996]
        automated match to d1nsha_
    10. Domains for 2lux:
      1. 1489756Domain d2luxa_: 2lux A: [243002]
        automated match to d1k2ha_
        complexed with ca; mutant
      2. 1489757Domain d2luxb_: 2lux B: [243003]
        automated match to d1k2ha_
        complexed with ca; mutant
    11. Domains for 2m3w:
      1. 1489760Domain d2m3wa_: 2m3w A: [243098]
        automated match to d1k2ha_
      2. 1489761Domain d2m3wb_: 2m3w B: [243099]
        automated match to d1k2ha_
    12. Domains for 2mjw:
      1. 1489774Domain d2mjwb_: 2mjw B: [260686]
        automated match to d1j55a_
      2. 1489775Domain d2mjwd_: 2mjw D: [260687]
        automated match to d1j55a_
    13. Domains for 2rgi:
      1. 1489720Domain d2rgia_: 2rgi A: [168116]
        automated match to d1m31a_
        complexed with ipa, na
      2. 1489721Domain d2rgib_: 2rgi B: [168117]
        automated match to d1m31a_
        complexed with ipa, na
    14. Domains for 2wc8:
      1. 1489728Domain d2wc8a_: 2wc8 A: [169208]
        automated match to d1odba_
        complexed with cit, na, zn
      2. 1489729Domain d2wc8b_: 2wc8 B: [169209]
        automated match to d1odba_
        complexed with cit, na, zn
      3. 1489730Domain d2wc8c_: 2wc8 C: [169210]
        automated match to d1odba_
        complexed with cit, na, zn
      4. 1489731Domain d2wc8d_: 2wc8 D: [169211]
        automated match to d1odba_
        complexed with cit, na, zn
    15. Domains for 2wcb:
      1. 1489740Domain d2wcba_: 2wcb A: [169212]
        automated match to d1odba_
        complexed with na, zn
      2. 1489741Domain d2wcbb_: 2wcb B: [169213]
        automated match to d1odba_
        complexed with na, zn
    16. Domains for 2wce:
      1. 1489726Domain d2wcea_: 2wce A: [169214]
        automated match to d1odba_
        complexed with na
      2. 1489727Domain d2wceb_: 2wce B: [169215]
        automated match to d1odba_
        complexed with na
    17. Domains for 2wcf:
      1. 1489748Domain d2wcfa_: 2wcf A: [169216]
        automated match to d1odba_
        complexed with na
      2. 1489749Domain d2wcfb_: 2wcf B: [169217]
        automated match to d1odba_
        complexed with na
      3. 1489750Domain d2wcfc_: 2wcf C: [169218]
        automated match to d1odba_
        complexed with na
      4. 1489751Domain d2wcfd_: 2wcf D: [169219]
        automated match to d1odba_
        complexed with na
      5. 1489752Domain d2wcfe_: 2wcf E: [169220]
        automated match to d1odba_
        complexed with na
      6. 1489753Domain d2wcff_: 2wcf F: [169221]
        automated match to d1odba_
        complexed with na
    18. Domain for 2wnd:
    19. Domain for 2wor:
    20. Domain for 2wos:
    21. Domains for 3c1v:
      1. 1489709Domain d3c1va_: 3c1v A: [155867]
        automated match to d1m31a_
        complexed with ca
      2. 1489710Domain d3c1vb_: 3c1v B: [155868]
        automated match to d1m31a_
        complexed with ca
      3. 1489711Domain d3c1vc_: 3c1v C: [155869]
        automated match to d1m31a_
        complexed with ca
      4. 1489712Domain d3c1vd_: 3c1v D: [155870]
        automated match to d1m31a_
        complexed with ca
    22. Domains for 3hcm:
      1. 1489746Domain d3hcma_: 3hcm A: [177384]
        automated match to d1mq1a_
        complexed with act, ca, s45
      2. 1489747Domain d3hcmb_: 3hcm B: [177385]
        automated match to d1mq1a_
        complexed with act, ca, s45
    23. Domains for 3nsi:
      1. 1489744Domain d3nsia_: 3nsi A: [182510]
        automated match to d1ksoa_
      2. 1489745Domain d3nsib_: 3nsi B: [182511]
        automated match to d1ksoa_
    24. Domains for 3nsk:
      1. 1489718Domain d3nska1: 3nsk A:3-93 [182512]
        automated match to d1ksoa_
        mutant
      2. 1489719Domain d3nskb1: 3nsk B:3-94 [182513]
        automated match to d1ksoa_
        mutant
    25. Domains for 3nsl:
      1. 1489699Domain d3nsla_: 3nsl A: [182514]
        automated match to d1ksoa_
        complexed with gol; mutant
      2. 1489700Domain d3nslb_: 3nsl B: [182515]
        automated match to d1ksoa_
        complexed with gol; mutant
      3. 1489701Domain d3nslc_: 3nsl C: [182516]
        automated match to d1ksoa_
        complexed with gol; mutant
      4. 1489702Domain d3nsld_: 3nsl D: [182517]
        automated match to d1ksoa_
        complexed with gol; mutant
      5. 1489703Domain d3nsle_: 3nsl E: [182518]
        automated match to d1ksoa_
        complexed with gol; mutant
      6. 1489704Domain d3nslf_: 3nsl F: [182519]
        automated match to d1ksoa_
        complexed with gol; mutant
    26. Domains for 3nso:
      1. 1489705Domain d3nsoa1: 3nso A:2-94 [182520]
        automated match to d1ksoa_
      2. 1489706Domain d3nsob1: 3nso B:3-94 [182521]
        automated match to d1ksoa_
    27. Domains for 3zwh:
      1. 1489742Domain d3zwha_: 3zwh A: [195645]
        automated match to d1m31a_
        complexed with act, azi, ca; mutant
      2. 1489743Domain d3zwhb_: 3zwh B: [195646]
        automated match to d1m31a_
        complexed with act, azi, ca; mutant
    28. Domain for 4aqi:
    29. Domain for 4aqj:
    30. Domain for 4cfq:
    31. Domain for 4cfr:
    32. Domains for 4duq:
      1. 1489697Domain d4duqa_: 4duq A: [192349]
        complexed with 15p, ca
      2. 1489698Domain d4duqb_: 4duq B: [192350]
        complexed with 15p, ca
    33. Domains for 4ggf:
      1. 1489714Domain d4ggfc_: 4ggf C: [202261]
        Other proteins in same PDB: d4ggfa_, d4ggfk_, d4ggfs_, d4ggfu_
        automated match to d3nsib_
        complexed with ca, gol, mn, so4
      2. 1489715Domain d4ggfl_: 4ggf L: [202263]
        Other proteins in same PDB: d4ggfa_, d4ggfk_, d4ggfs_, d4ggfu_
        automated match to d3nsib_
        complexed with ca, gol, mn, so4
      3. 1489716Domain d4ggft_: 4ggf T: [202264]
        Other proteins in same PDB: d4ggfa_, d4ggfk_, d4ggfs_, d4ggfu_
        automated match to d3nsib_
        complexed with ca, gol, mn, so4
      4. 1489717Domain d4ggfv_: 4ggf V: [202265]
        Other proteins in same PDB: d4ggfa_, d4ggfk_, d4ggfs_, d4ggfu_
        automated match to d3nsib_
        complexed with ca, gol, mn, so4
  3. 1489776Zebrafish (Danio rerio) [TaxId:7955] [189706] (1 PDB entry)

More info for Protein automated matches from a.39.1.2: S100 proteins

Timeline for Protein automated matches from a.39.1.2: S100 proteins: