Lineage for Protein: automated matches

  1. Root: SCOPe 2.02
  2. 1074916Class a: All alpha proteins [46456] (284 folds)
  3. 1087624Fold a.39: EF Hand-like [47472] (4 superfamilies)
    core: 4 helices; array of 2 hairpins, opened
  4. 1087625Superfamily a.39.1: EF-hand [47473] (12 families) (S)
    Duplication: consists of two EF-hand units: each is made of two helices connected with calcium-binding loop
  5. 1087651Family a.39.1.2: S100 proteins [47478] (2 proteins)
    dimer: subunits are made of two EF-hands
  6. 1087845Protein automated matches [190132] (4 species)
    not a true protein

Species:

  1. 1087846Bos taurus [TaxId:9913] [193459] (1 PDB entry)
  2. 1087848Danio rerio [TaxId:7955] [192785] (1 PDB entry)
  3. 1087853Human (Homo sapiens) [TaxId:9606] [187203] (20 PDB entries)
    1. Domains for 2h61:
      1. 1087888Domain d2h61a_: 2h61 A: [136169]
        automated match to d1mq1a_
        complexed with ca, pg4
      2. 1087889Domain d2h61b_: 2h61 B: [136170]
        automated match to d1mq1a_
        complexed with ca, pg4
      3. 1087890Domain d2h61c_: 2h61 C: [136171]
        automated match to d1mq1a_
        complexed with ca, pg4
      4. 1087891Domain d2h61d_: 2h61 D: [136172]
        automated match to d1mq1a_
        complexed with ca, pg4
      5. 1087892Domain d2h61e_: 2h61 E: [136173]
        automated match to d1mq1a_
        complexed with ca, pg4
      6. 1087893Domain d2h61f_: 2h61 F: [136174]
        automated match to d1mq1a_
        complexed with ca, pg4
      7. 1087894Domain d2h61g_: 2h61 G: [136175]
        automated match to d1mq1a_
        complexed with ca, pg4
      8. 1087895Domain d2h61h_: 2h61 H: [136176]
        automated match to d1mq1a_
        complexed with ca, pg4
    2. Domains for 2rgi:
      1. 1087874Domain d2rgia_: 2rgi A: [168116]
        automated match to d1m31a_
        complexed with ipa, na
      2. 1087875Domain d2rgib_: 2rgi B: [168117]
        automated match to d1m31a_
        complexed with ipa, na
    3. Domains for 2wc8:
      1. 1087884Domain d2wc8a_: 2wc8 A: [169208]
        automated match to d1odba_
        complexed with cit, na, zn
      2. 1087885Domain d2wc8b_: 2wc8 B: [169209]
        automated match to d1odba_
        complexed with cit, na, zn
      3. 1087886Domain d2wc8c_: 2wc8 C: [169210]
        automated match to d1odba_
        complexed with cit, na, zn
      4. 1087887Domain d2wc8d_: 2wc8 D: [169211]
        automated match to d1odba_
        complexed with cit, na, zn
    4. Domains for 2wcb:
      1. 1087896Domain d2wcba_: 2wcb A: [169212]
        automated match to d1odba_
        complexed with na, zn
      2. 1087897Domain d2wcbb_: 2wcb B: [169213]
        automated match to d1odba_
        complexed with na, zn
    5. Domains for 2wce:
      1. 1087880Domain d2wcea_: 2wce A: [169214]
        automated match to d1odba_
        complexed with na
      2. 1087881Domain d2wceb_: 2wce B: [169215]
        automated match to d1odba_
        complexed with na
    6. Domains for 2wcf:
      1. 1087902Domain d2wcfa_: 2wcf A: [169216]
        automated match to d1odba_
        complexed with na
      2. 1087903Domain d2wcfb_: 2wcf B: [169217]
        automated match to d1odba_
        complexed with na
      3. 1087904Domain d2wcfc_: 2wcf C: [169218]
        automated match to d1odba_
        complexed with na
      4. 1087905Domain d2wcfd_: 2wcf D: [169219]
        automated match to d1odba_
        complexed with na
      5. 1087906Domain d2wcfe_: 2wcf E: [169220]
        automated match to d1odba_
        complexed with na
      6. 1087907Domain d2wcff_: 2wcf F: [169221]
        automated match to d1odba_
        complexed with na
    7. Domain for 2wnd:
    8. Domain for 2wor:
    9. Domain for 2wos:
    10. Domains for 3c1v:
      1. 1087864Domain d3c1va_: 3c1v A: [155867]
        automated match to d1m31a_
        complexed with ca
      2. 1087865Domain d3c1vb_: 3c1v B: [155868]
        automated match to d1m31a_
        complexed with ca
      3. 1087866Domain d3c1vc_: 3c1v C: [155869]
        automated match to d1m31a_
        complexed with ca
      4. 1087867Domain d3c1vd_: 3c1v D: [155870]
        automated match to d1m31a_
        complexed with ca
    11. Domains for 3hcm:
      1. 1087900Domain d3hcma_: 3hcm A: [177384]
        automated match to d1mq1a_
        complexed with act, ca, s45
      2. 1087901Domain d3hcmb_: 3hcm B: [177385]
        automated match to d1mq1a_
        complexed with act, ca, s45
    12. Domains for 3nsi:
      1. 1087898Domain d3nsia_: 3nsi A: [182510]
        automated match to d1ksoa_
      2. 1087899Domain d3nsib_: 3nsi B: [182511]
        automated match to d1ksoa_
    13. Domains for 3nsk:
      1. 1087872Domain d3nska1: 3nsk A:3-93 [182512]
        automated match to d1ksoa_
        mutant
      2. 1087873Domain d3nskb1: 3nsk B:3-94 [182513]
        automated match to d1ksoa_
        mutant
    14. Domains for 3nsl:
      1. 1087856Domain d3nsla_: 3nsl A: [182514]
        automated match to d1ksoa_
        complexed with gol; mutant
      2. 1087857Domain d3nslb_: 3nsl B: [182515]
        automated match to d1ksoa_
        complexed with gol; mutant
      3. 1087858Domain d3nslc_: 3nsl C: [182516]
        automated match to d1ksoa_
        complexed with gol; mutant
      4. 1087859Domain d3nsld_: 3nsl D: [182517]
        automated match to d1ksoa_
        complexed with gol; mutant
      5. 1087860Domain d3nsle_: 3nsl E: [182518]
        automated match to d1ksoa_
        complexed with gol; mutant
      6. 1087861Domain d3nslf_: 3nsl F: [182519]
        automated match to d1ksoa_
        complexed with gol; mutant
    15. Domains for 3nso:
      1. 1087862Domain d3nsoa1: 3nso A:2-94 [182520]
        automated match to d1ksoa_
      2. 1087863Domain d3nsob1: 3nso B:3-94 [182521]
        automated match to d1ksoa_
    16. Domains for 3zwh:
      1. 1087882Domain d3zwha_: 3zwh A: [195645]
        automated match to d1m31a_
        complexed with act, azi, ca; mutant
      2. 1087883Domain d3zwhb_: 3zwh B: [195646]
        automated match to d1m31a_
        complexed with act, azi, ca; mutant
    17. Domain for 4aqi:
    18. Domain for 4aqj:
    19. Domains for 4duq:
      1. 1087854Domain d4duqa_: 4duq A: [192349]
        complexed with 15p, ca
      2. 1087855Domain d4duqb_: 4duq B: [192350]
        complexed with 15p, ca
    20. Domains for 4ggf:
      1. 1087869Domain d4ggfa_: 4ggf A: [196624]
        automated match to d1mr8a_
        complexed with ca, gol, mn, so4
      2. 1087870Domain d4ggfs_: 4ggf S: [196625]
        automated match to d1mr8a_
        complexed with ca, gol, mn, so4
      3. 1087871Domain d4ggfu_: 4ggf U: [196623]
        automated match to d1mr8a_
        complexed with ca, gol, mn, so4
  4. 1087908Zebrafish (Danio rerio) [TaxId:7955] [189706] (1 PDB entry)

More info for Protein automated matches from a.39.1.2: S100 proteins

Timeline for Protein automated matches from a.39.1.2: S100 proteins: