Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1994319Fold a.39: EF Hand-like [47472] (4 superfamilies)
    core: 4 helices; array of 2 hairpins, opened
  4. 1994320Superfamily a.39.1: EF-hand [47473] (12 families) (S)
    Duplication: consists of two EF-hand units: each is made of two helices connected with calcium-binding loop
  5. 1994353Family a.39.1.2: S100 proteins [47478] (2 protein domains)
    dimer: subunits are made of two EF-hands
  6. 1994573Protein automated matches [190132] (4 species)
    not a true protein

Species:

  1. 1994574Cow (Bos taurus) [TaxId:9913] [193459] (1 PDB entry)
  2. 1994576Human (Homo sapiens) [TaxId:9606] [187203] (42 PDB entries)
    1. Domains for 2h61:
      1. 1994618Domain d2h61a_: 2h61 A: [136169]
        automated match to d1mq1a_
        complexed with ca, pg4
      2. 1994619Domain d2h61b_: 2h61 B: [136170]
        automated match to d1mq1a_
        complexed with ca, pg4
      3. 1994620Domain d2h61c_: 2h61 C: [136171]
        automated match to d1mq1a_
        complexed with ca, pg4
      4. 1994621Domain d2h61d_: 2h61 D: [136172]
        automated match to d1mq1a_
        complexed with ca, pg4
      5. 1994622Domain d2h61e_: 2h61 E: [136173]
        automated match to d1mq1a_
        complexed with ca, pg4
      6. 1994623Domain d2h61f_: 2h61 F: [136174]
        automated match to d1mq1a_
        complexed with ca, pg4
      7. 1994624Domain d2h61g_: 2h61 G: [136175]
        automated match to d1mq1a_
        complexed with ca, pg4
      8. 1994625Domain d2h61h_: 2h61 H: [136176]
        automated match to d1mq1a_
        complexed with ca, pg4
    2. Domains for 2l0p:
      1. 1994661Domain d2l0pa_: 2l0p A: [242722]
        automated match to d1k2ha_
      2. 1994662Domain d2l0pb_: 2l0p B: [242723]
        automated match to d1k2ha_
    3. Domains for 2lhl:
      1. 1994653Domain d2lhla_: 2lhl A: [242887]
        automated match to d1k2ha_
        mutant
      2. 1994654Domain d2lhlb_: 2lhl B: [242888]
        automated match to d1k2ha_
        mutant
    4. Domains for 2lls:
      1. 1994655Domain d2llsa_: 2lls A: [242925]
        automated match to d1k2ha_
      2. 1994656Domain d2llsb_: 2lls B: [242926]
        automated match to d1k2ha_
    5. Domains for 2llt:
      1. 1994657Domain d2llta_: 2llt A: [242927]
        automated match to d1k2ha_
      2. 1994658Domain d2lltb_: 2llt B: [242928]
        automated match to d1k2ha_
    6. Domains for 2llu:
      1. 1994665Domain d2llua_: 2llu A: [242929]
        automated match to d1k2ha_
      2. 1994666Domain d2llub_: 2llu B: [242930]
        automated match to d1k2ha_
    7. Domains for 2lp2:
      1. 1994649Domain d2lp2a_: 2lp2 A: [242954]
        automated match to d1k2ha_
        complexed with ca, hcs
      2. 1994650Domain d2lp2b_: 2lp2 B: [242955]
        automated match to d1k2ha_
        complexed with ca, hcs
    8. Domains for 2lp3:
      1. 1994645Domain d2lp3a_: 2lp3 A: [242956]
        automated match to d1k2ha_
        complexed with ca
      2. 1994646Domain d2lp3b_: 2lp3 B: [242957]
        automated match to d1k2ha_
        complexed with ca
    9. Domains for 2luc:
      1. 1994663Domain d2luca_: 2luc A: [242995]
        automated match to d1nsha_
      2. 1994664Domain d2lucb_: 2luc B: [242996]
        automated match to d1nsha_
    10. Domains for 2lux:
      1. 1994647Domain d2luxa_: 2lux A: [243002]
        automated match to d1k2ha_
        complexed with ca; mutant
      2. 1994648Domain d2luxb_: 2lux B: [243003]
        automated match to d1k2ha_
        complexed with ca; mutant
    11. Domains for 2m1k:
      1. 1994659Domain d2m1kb_: 2m1k B: [270267]
        automated match to d1a03a_
      2. 1994660Domain d2m1kd_: 2m1k D: [270268]
        automated match to d1a03a_
    12. Domains for 2m3w:
      1. 1994651Domain d2m3wa_: 2m3w A: [243098]
        automated match to d1k2ha_
      2. 1994652Domain d2m3wb_: 2m3w B: [243099]
        automated match to d1k2ha_
    13. Domains for 2mjw:
      1. 1994667Domain d2mjwb_: 2mjw B: [260686]
        automated match to d1j55a_
      2. 1994668Domain d2mjwd_: 2mjw D: [260687]
        automated match to d1j55a_
    14. Domains for 2rgi:
      1. 1994606Domain d2rgia_: 2rgi A: [168116]
        automated match to d1m31a_
        complexed with ipa, na
      2. 1994607Domain d2rgib_: 2rgi B: [168117]
        automated match to d1m31a_
        complexed with ipa, na
    15. Domains for 2wc8:
      1. 1994614Domain d2wc8a1: 2wc8 A:1-91 [169208]
        Other proteins in same PDB: d2wc8a2, d2wc8b2, d2wc8c2, d2wc8d2
        automated match to d1odba_
        complexed with cit, na, zn
      2. 1994615Domain d2wc8b1: 2wc8 B:1-91 [169209]
        Other proteins in same PDB: d2wc8a2, d2wc8b2, d2wc8c2, d2wc8d2
        automated match to d1odba_
        complexed with cit, na, zn
      3. 1994616Domain d2wc8c1: 2wc8 C:1-91 [169210]
        Other proteins in same PDB: d2wc8a2, d2wc8b2, d2wc8c2, d2wc8d2
        automated match to d1odba_
        complexed with cit, na, zn
      4. 1994617Domain d2wc8d1: 2wc8 D:1-91 [169211]
        Other proteins in same PDB: d2wc8a2, d2wc8b2, d2wc8c2, d2wc8d2
        automated match to d1odba_
        complexed with cit, na, zn
    16. Domains for 2wcb:
      1. 1994626Domain d2wcba1: 2wcb A:1-91 [169212]
        Other proteins in same PDB: d2wcba2, d2wcbb2
        automated match to d1odba_
        complexed with na, zn
      2. 1994627Domain d2wcbb1: 2wcb B:1-90 [169213]
        Other proteins in same PDB: d2wcba2, d2wcbb2
        automated match to d1odba_
        complexed with na, zn
    17. Domains for 2wce:
      1. 1994612Domain d2wcea_: 2wce A: [169214]
        automated match to d1odba_
        complexed with na
      2. 1994613Domain d2wceb_: 2wce B: [169215]
        automated match to d1odba_
        complexed with na
    18. Domains for 2wcf:
      1. 1994639Domain d2wcfa1: 2wcf A:1-90 [169216]
        Other proteins in same PDB: d2wcfa2, d2wcfb2, d2wcfc2, d2wcfe2, d2wcff2
        automated match to d1odba_
        complexed with na
      2. 1994640Domain d2wcfb1: 2wcf B:1-90 [169217]
        Other proteins in same PDB: d2wcfa2, d2wcfb2, d2wcfc2, d2wcfe2, d2wcff2
        automated match to d1odba_
        complexed with na
      3. 1994641Domain d2wcfc1: 2wcf C:1-88 [169218]
        Other proteins in same PDB: d2wcfa2, d2wcfb2, d2wcfc2, d2wcfe2, d2wcff2
        automated match to d1odba_
        complexed with na
      4. 1994642Domain d2wcfd_: 2wcf D: [169219]
        Other proteins in same PDB: d2wcfa2, d2wcfb2, d2wcfc2, d2wcfe2, d2wcff2
        automated match to d1odba_
        complexed with na
      5. 1994643Domain d2wcfe1: 2wcf E:1-89 [169220]
        Other proteins in same PDB: d2wcfa2, d2wcfb2, d2wcfc2, d2wcfe2, d2wcff2
        automated match to d1odba_
        complexed with na
      6. 1994644Domain d2wcff1: 2wcf F:1-89 [169221]
        Other proteins in same PDB: d2wcfa2, d2wcfb2, d2wcfc2, d2wcfe2, d2wcff2
        automated match to d1odba_
        complexed with na
    19. Domain for 2wnd:
    20. Domain for 2wor:
    21. Domain for 2wos:
    22. Domains for 3c1v:
      1. 1994595Domain d3c1va_: 3c1v A: [155867]
        automated match to d1m31a_
        complexed with ca
      2. 1994596Domain d3c1vb_: 3c1v B: [155868]
        automated match to d1m31a_
        complexed with ca
      3. 1994597Domain d3c1vc_: 3c1v C: [155869]
        automated match to d1m31a_
        complexed with ca
      4. 1994598Domain d3c1vd_: 3c1v D: [155870]
        automated match to d1m31a_
        complexed with ca
    23. Domains for 3hcm:
      1. 1994632Domain d3hcma_: 3hcm A: [177384]
        automated match to d1mq1a_
        complexed with act, ca, s45
      2. 1994633Domain d3hcmb_: 3hcm B: [177385]
        automated match to d1mq1a_
        complexed with act, ca, s45
    24. Domains for 3n22:
      1. 1994577Domain d3n22a_: 3n22 A: [306007]
        automated match to d2mrda_
        complexed with 15p, ca
      2. 1994578Domain d3n22b_: 3n22 B: [306008]
        automated match to d2mrda_
        complexed with 15p, ca
    25. Domains for 3nsi:
      1. 1994630Domain d3nsia_: 3nsi A: [182510]
        automated match to d1ksoa_
      2. 1994631Domain d3nsib_: 3nsi B: [182511]
        automated match to d1ksoa_
    26. Domains for 3nsk:
      1. 1994604Domain d3nska1: 3nsk A:3-93 [182512]
        automated match to d1ksoa_
        mutant
      2. 1994605Domain d3nskb1: 3nsk B:3-94 [182513]
        automated match to d1ksoa_
        mutant
    27. Domains for 3nsl:
      1. 1994581Domain d3nsla_: 3nsl A: [182514]
        automated match to d1ksoa_
        complexed with gol; mutant
      2. 1994582Domain d3nslb_: 3nsl B: [182515]
        automated match to d1ksoa_
        complexed with gol; mutant
      3. 1994583Domain d3nslc_: 3nsl C: [182516]
        automated match to d1ksoa_
        complexed with gol; mutant
      4. 1994584Domain d3nsld_: 3nsl D: [182517]
        automated match to d1ksoa_
        complexed with gol; mutant
      5. 1994585Domain d3nsle_: 3nsl E: [182518]
        automated match to d1ksoa_
        complexed with gol; mutant
      6. 1994586Domain d3nslf_: 3nsl F: [182519]
        automated match to d1ksoa_
        complexed with gol; mutant
    28. Domains for 3nso:
      1. 1994587Domain d3nsoa1: 3nso A:2-94 [182520]
        automated match to d1ksoa_
      2. 1994588Domain d3nsob1: 3nso B:3-94 [182521]
        automated match to d1ksoa_
    29. Domains for 3zwh:
      1. 1994628Domain d3zwha_: 3zwh A: [195645]
        automated match to d1m31a_
        complexed with act, azi, ca; mutant
      2. 1994629Domain d3zwhb_: 3zwh B: [195646]
        automated match to d1m31a_
        complexed with act, azi, ca; mutant
    30. Domain for 4aqi:
    31. Domain for 4aqj:
    32. Domains for 4cfq:
      1. 1994589Domain d4cfqa_: 4cfq A: [256604]
        automated match to d2rgia_
        complexed with ca
      2. 1994590Domain d4cfqb_: 4cfq B: [262572]
        automated match to d2rgia_
        complexed with ca
      3. 1994591Domain d4cfqc_: 4cfq C: [262573]
        automated match to d2rgia_
        complexed with ca
      4. 1994592Domain d4cfqd_: 4cfq D: [262574]
        automated match to d2rgia_
        complexed with ca
    33. Domains for 4cfr:
      1. 1994593Domain d4cfra_: 4cfr A: [256605]
        automated match to d1m31a_
        complexed with ca; mutant
      2. 1994594Domain d4cfrb_: 4cfr B: [262575]
        automated match to d1m31a_
        complexed with ca; mutant
    34. Domains for 4duq:
      1. 1994579Domain d4duqa_: 4duq A: [192349]
        complexed with 15p, ca
      2. 1994580Domain d4duqb_: 4duq B: [192350]
        complexed with 15p, ca
    35. Domains for 4ggf:
      1. 1994600Domain d4ggfc_: 4ggf C: [202261]
        Other proteins in same PDB: d4ggfa_, d4ggfk_, d4ggfs_, d4ggfu_
        automated match to d3nsib_
        complexed with ca, gol, mn, so4
      2. 1994601Domain d4ggfl_: 4ggf L: [202263]
        Other proteins in same PDB: d4ggfa_, d4ggfk_, d4ggfs_, d4ggfu_
        automated match to d3nsib_
        complexed with ca, gol, mn, so4
      3. 1994602Domain d4ggft_: 4ggf T: [202264]
        Other proteins in same PDB: d4ggfa_, d4ggfk_, d4ggfs_, d4ggfu_
        automated match to d3nsib_
        complexed with ca, gol, mn, so4
      4. 1994603Domain d4ggfv_: 4ggf V: [202265]
        Other proteins in same PDB: d4ggfa_, d4ggfk_, d4ggfs_, d4ggfu_
        automated match to d3nsib_
        complexed with ca, gol, mn, so4
    36. Domains for 4xjk:
      1. 1994634Domain d4xjkb_: 4xjk B: [271563]
        Other proteins in same PDB: d4xjka_, d4xjkc_, d4xjke_, d4xjkg_, d4xjki_
        automated match to d4ggfl_
        complexed with ca, mn, na
      2. 1994635Domain d4xjkd_: 4xjk D: [271564]
        Other proteins in same PDB: d4xjka_, d4xjkc_, d4xjke_, d4xjkg_, d4xjki_
        automated match to d4ggfl_
        complexed with ca, mn, na
      3. 1994636Domain d4xjkf_: 4xjk F: [271567]
        Other proteins in same PDB: d4xjka_, d4xjkc_, d4xjke_, d4xjkg_, d4xjki_
        automated match to d4ggfl_
        complexed with ca, mn, na
      4. 1994637Domain d4xjkh_: 4xjk H: [271574]
        Other proteins in same PDB: d4xjka_, d4xjkc_, d4xjke_, d4xjkg_, d4xjki_
        automated match to d4ggfl_
        complexed with ca, mn, na
      5. 1994638Domain d4xjkj_: 4xjk J: [271571]
        Other proteins in same PDB: d4xjka_, d4xjkc_, d4xjke_, d4xjkg_, d4xjki_
        automated match to d4ggfl_
        complexed with ca, mn, na
    37. Domain for 4ybh:
    38. Domains for 5hlo:
      1. 2274843Domain d5hloc1: 5hlo C:2-93 [318144]
        Other proteins in same PDB: d5hloa2, d5hlob2, d5hloc2, d5hlod2
        automated match to d2y5ie_
        complexed with act, ca, cac, cl, zn
      2. 2274867Domain d5hloa1: 5hlo A:2-89 [318168]
        Other proteins in same PDB: d5hloa2, d5hlob2, d5hloc2, d5hlod2
        automated match to d2y5ie_
        complexed with act, ca, cac, cl, zn
      3. 2274869Domain d5hlob1: 5hlo B:2-93 [318170]
        Other proteins in same PDB: d5hloa2, d5hlob2, d5hloc2, d5hlod2
        automated match to d2y5ie_
        complexed with act, ca, cac, cl, zn
      4. 2274925Domain d5hlod1: 5hlo D:2-93 [318226]
        Other proteins in same PDB: d5hloa2, d5hlob2, d5hloc2, d5hlod2
        automated match to d2y5ie_
        complexed with act, ca, cac, cl, zn
    39. Domains for 5hlv:
      1. 2274837Domain d5hlvb1: 5hlv B:2-89 [318138]
        Other proteins in same PDB: d5hlva2, d5hlvb2, d5hlvd2, d5hlve2, d5hlvf2, d5hlvg2, d5hlvh2
        automated match to d2y5ie_
        complexed with act, ca, cl, zn
      2. 2274845Domain d5hlvg1: 5hlv G:2-90 [318146]
        Other proteins in same PDB: d5hlva2, d5hlvb2, d5hlvd2, d5hlve2, d5hlvf2, d5hlvg2, d5hlvh2
        automated match to d2y5ie_
        complexed with act, ca, cl, zn
      3. 2274847Domain d5hlvh1: 5hlv H:2-89 [318148]
        Other proteins in same PDB: d5hlva2, d5hlvb2, d5hlvd2, d5hlve2, d5hlvf2, d5hlvg2, d5hlvh2
        automated match to d2y5ie_
        complexed with act, ca, cl, zn
      4. 2274850Domain d5hlvd1: 5hlv D:2-89 [318151]
        Other proteins in same PDB: d5hlva2, d5hlvb2, d5hlvd2, d5hlve2, d5hlvf2, d5hlvg2, d5hlvh2
        automated match to d2y5ie_
        complexed with act, ca, cl, zn
      5. 2274858Domain d5hlve1: 5hlv E:2-88 [318159]
        Other proteins in same PDB: d5hlva2, d5hlvb2, d5hlvd2, d5hlve2, d5hlvf2, d5hlvg2, d5hlvh2
        automated match to d2y5ie_
        complexed with act, ca, cl, zn
      6. 2274888Domain d5hlvf1: 5hlv F:2-88 [318189]
        Other proteins in same PDB: d5hlva2, d5hlvb2, d5hlvd2, d5hlve2, d5hlvf2, d5hlvg2, d5hlvh2
        automated match to d2y5ie_
        complexed with act, ca, cl, zn
      7. 2274914Domain d5hlvc_: 5hlv C: [318215]
        Other proteins in same PDB: d5hlva2, d5hlvb2, d5hlvd2, d5hlve2, d5hlvf2, d5hlvg2, d5hlvh2
        automated match to d2y5ie_
        complexed with act, ca, cl, zn
      8. 2274919Domain d5hlva1: 5hlv A:2-89 [318220]
        Other proteins in same PDB: d5hlva2, d5hlvb2, d5hlvd2, d5hlve2, d5hlvf2, d5hlvg2, d5hlvh2
        automated match to d2y5ie_
        complexed with act, ca, cl, zn
    40. Domains for 5hyd:
      1. 2285903Domain d5hydb_: 5hyd B: [329204]
        automated match to d2y5ic_
      2. 2285913Domain d5hydd_: 5hyd D: [329214]
        automated match to d2y5ic_
      3. 2285932Domain d5hyda_: 5hyd A: [329233]
        automated match to d2y5ic_
      4. 2285978Domain d5hydc_: 5hyd C: [329279]
        automated match to d2y5ic_
    41. Domains for 5i8n:
      1. 2278595Domain d5i8nb_: 5i8n B: [321896]
        automated match to d4ggfl_
      2. 2278610Domain d5i8na_: 5i8n A: [321911]
        automated match to d4ggfl_
    42. Domains for 5w1f:
      1. 2292174Domain d5w1fh_: 5w1f H: [335475]
        Other proteins in same PDB: d5w1fa_, d5w1fc_, d5w1fe_, d5w1fg_
        automated match to d5i8nb_
        complexed with ca, na, ni
      2. 2292179Domain d5w1fb_: 5w1f B: [335480]
        Other proteins in same PDB: d5w1fa_, d5w1fc_, d5w1fe_, d5w1fg_
        automated match to d5i8nb_
        complexed with ca, na, ni
      3. 2292181Domain d5w1fd_: 5w1f D: [335482]
        Other proteins in same PDB: d5w1fa_, d5w1fc_, d5w1fe_, d5w1fg_
        automated match to d5i8nb_
        complexed with ca, na, ni
      4. 2292228Domain d5w1ff_: 5w1f F: [335529]
        Other proteins in same PDB: d5w1fa_, d5w1fc_, d5w1fe_, d5w1fg_
        automated match to d5i8nb_
        complexed with ca, na, ni
  3. 1994669Mouse (Mus musculus) [TaxId:10090] [269737] (1 PDB entry)
  4. 1994671Zebrafish (Danio rerio) [TaxId:7955] [189706] (1 PDB entry)

More info for Protein automated matches from a.39.1.2: S100 proteins

Timeline for Protein automated matches from a.39.1.2: S100 proteins: