Lineage for Protein: automated matches

  1. Root: SCOPe 2.05
  2. 1886641Class d: Alpha and beta proteins (a+b) [53931] (381 folds)
  3. 1898312Fold d.20: UBC-like [54494] (1 superfamily)
    alpha-beta(4)-alpha(3); core: meander beta-sheet plus one helix 2
  4. 1898313Superfamily d.20.1: UBC-like [54495] (5 families) (S)
  5. 1898682Family d.20.1.0: automated matches [191322] (1 protein)
    not a true family
  6. 1898683Protein automated matches [190120] (6 species)
    not a true protein

Species:

  1. 1898684Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [226239] (1 PDB entry)
  2. 1898686Cow (Bos taurus) [TaxId:9913] [186972] (1 PDB entry)
  3. 1898688Human (Homo sapiens) [TaxId:9606] [186843] (16 PDB entries)
    1. Domain for 1wzv:
    2. Domain for 1wzw:
    3. Domain for 1zdn:
    4. Domain for 2ebk:
    5. Domain for 2ebm:
    6. Domain for 2edi:
    7. Domain for 2ob4:
    8. Domain for 3fn1:
    9. Domains for 3rz3:
      1. 1898695Domain d3rz3a_: 3rz3 A: [216129]
        automated match to d2cyxa_
        complexed with u94
      2. 1898696Domain d3rz3b_: 3rz3 B: [216130]
        automated match to d2cyxa_
        complexed with u94
      3. 1898697Domain d3rz3c_: 3rz3 C: [216131]
        automated match to d2cyxa_
        complexed with u94
      4. 1898698Domain d3rz3d_: 3rz3 D: [216132]
        automated match to d2cyxa_
        complexed with u94
    10. Domain for 4ip3:
    11. Domains for 4mdk:
      1. 1898702Domain d4mdka_: 4mdk A: [229757]
        Other proteins in same PDB: d4mdke_, d4mdkf_, d4mdkg_, d4mdkh_
        automated match to d2ob4a_
        complexed with u94
      2. 1898703Domain d4mdkb_: 4mdk B: [229680]
        Other proteins in same PDB: d4mdke_, d4mdkf_, d4mdkg_, d4mdkh_
        automated match to d2ob4a_
        complexed with u94
      3. 1898704Domain d4mdkc_: 4mdk C: [229685]
        Other proteins in same PDB: d4mdke_, d4mdkf_, d4mdkg_, d4mdkh_
        automated match to d2ob4a_
        complexed with u94
      4. 1898705Domain d4mdkd_: 4mdk D: [229681]
        Other proteins in same PDB: d4mdke_, d4mdkf_, d4mdkg_, d4mdkh_
        automated match to d2ob4a_
        complexed with u94
    12. Domain for 4q5e:
    13. Domain for 4q5h:
    14. Domain for 4w5v:
    15. Domain for 4y1l:
    16. Domain for 4yii:
  4. 1898711Plasmodium falciparum [TaxId:36329] [187332] (2 PDB entries)
    1. Domain for 2q0v:
    2. Domain for 3e95:
  5. 1898714Plasmodium yoelii [TaxId:5861] [255550] (1 PDB entry)
  6. 1898716Trypanosoma cruzi [TaxId:5693] [234333] (1 PDB entry)

More info for Protein automated matches from d.20.1.0: automated matches

Timeline for Protein automated matches from d.20.1.0: automated matches: