Lineage for Protein: automated matches

  1. Root: SCOPe 2.04
  2. 1631855Class d: Alpha and beta proteins (a+b) [53931] (380 folds)
  3. 1642804Fold d.20: UBC-like [54494] (1 superfamily)
    alpha-beta(4)-alpha(3); core: meander beta-sheet plus one helix 2
  4. 1642805Superfamily d.20.1: UBC-like [54495] (5 families) (S)
  5. 1643148Family d.20.1.0: automated matches [191322] (1 protein)
    not a true family
  6. 1643149Protein automated matches [190120] (6 species)
    not a true protein

Species:

  1. 1643150Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [226239] (1 PDB entry)
  2. 1643152Cow (Bos taurus) [TaxId:9913] [186972] (1 PDB entry)
  3. 1643154Human (Homo sapiens) [TaxId:9606] [186843] (11 PDB entries)
    1. Domain for 1wzv:
    2. Domain for 1wzw:
    3. Domain for 1zdn:
    4. Domain for 2ebm:
    5. Domain for 2edi:
    6. Domain for 2ob4:
    7. Domain for 3fn1:
    8. Domains for 3rz3:
      1. 1643159Domain d3rz3a_: 3rz3 A: [216129]
        automated match to d2cyxa_
        complexed with u94
      2. 1643160Domain d3rz3b_: 3rz3 B: [216130]
        automated match to d2cyxa_
        complexed with u94
      3. 1643161Domain d3rz3c_: 3rz3 C: [216131]
        automated match to d2cyxa_
        complexed with u94
      4. 1643162Domain d3rz3d_: 3rz3 D: [216132]
        automated match to d2cyxa_
        complexed with u94
    9. Domain for 4ip3:
    10. Domains for 4mdk:
      1. 1643166Domain d4mdka_: 4mdk A: [229757]
        Other proteins in same PDB: d4mdke_, d4mdkf_, d4mdkg_, d4mdkh_
        automated match to d2ob4a_
        complexed with u94
      2. 1643167Domain d4mdkb_: 4mdk B: [229680]
        Other proteins in same PDB: d4mdke_, d4mdkf_, d4mdkg_, d4mdkh_
        automated match to d2ob4a_
        complexed with u94
      3. 1643168Domain d4mdkc_: 4mdk C: [229685]
        Other proteins in same PDB: d4mdke_, d4mdkf_, d4mdkg_, d4mdkh_
        automated match to d2ob4a_
        complexed with u94
      4. 1643169Domain d4mdkd_: 4mdk D: [229681]
        Other proteins in same PDB: d4mdke_, d4mdkf_, d4mdkg_, d4mdkh_
        automated match to d2ob4a_
        complexed with u94
    11. Domain for 4q5e:
  4. 1643172Plasmodium falciparum [TaxId:36329] [187332] (2 PDB entries)
    1. Domain for 2q0v:
    2. Domain for 3e95:
  5. 1643175Plasmodium yoelii [TaxId:5861] [255550] (1 PDB entry)
  6. 1643177Trypanosoma cruzi [TaxId:5693] [234333] (1 PDB entry)

More info for Protein automated matches from d.20.1.0: automated matches

Timeline for Protein automated matches from d.20.1.0: automated matches: