Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. Fold d.15: beta-Grasp (ubiquitin-like) [54235] (15 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. Superfamily d.15.1: Ubiquitin-like [54236] (11 families) (S)
  5. Family d.15.1.1: Ubiquitin-related [54237] (39 proteins)
    Pfam PF00240
  6. Protein automated matches [190118] (16 species)
    not a true protein

Species:

  1. African clawed frog (Xenopus laevis) [TaxId:8355] [255337] (1 PDB entry)
  2. Autographa californica multiple nucleopolyhedrovirus [TaxId:307456] [387734] (1 PDB entry)
  3. Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [189675] (2 PDB entries)
    1. Domain for 3olm:
    2. Domains for 3qht:
      1. Domain d3qhta_: 3qht A: [184386]
        Other proteins in same PDB: d3qhtc_, d3qhtd_
        automated match to d1euvb_
        complexed with gol
      2. Domain d3qhtb_: 3qht B: [184387]
        Other proteins in same PDB: d3qhtc_, d3qhtd_
        automated match to d1euvb_
        complexed with gol
  4. Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [193751] (7 PDB entries)
    1. Domain for 3v60:
    2. Domain for 3v61:
    3. Domains for 3v62:
      1. Domain d3v62a_: 3v62 A: [201201]
        Other proteins in same PDB: d3v62b1, d3v62b2, d3v62e1, d3v62e2
        automated match to d3v62d_
        protein/DNA complex; complexed with neq, so4
      2. Domain d3v62d_: 3v62 D: [193752]
        Other proteins in same PDB: d3v62b1, d3v62b2, d3v62e1, d3v62e2
        automated match to d1euvb_
        protein/DNA complex; complexed with neq, so4
    4. Domain for 4q5e:
    5. Domain for 4q5h:
    6. Domain for 5d6j:
    7. Domains for 5jne:
      1. Domain d5jnec_: 5jne C: [321052]
        Other proteins in same PDB: d5jneb1, d5jneb2, d5jned1, d5jned2, d5jnef_, d5jneh1, d5jneh2
        automated match to d1euvb_
        complexed with 6ln, gol, zn
      2. Domain d5jneg_: 5jne G: [321087]
        Other proteins in same PDB: d5jneb1, d5jneb2, d5jned1, d5jned2, d5jnef_, d5jneh1, d5jneh2
        automated match to d1euvb_
        complexed with 6ln, gol, zn
  5. Cow (Bos taurus) [TaxId:9913] [197078] (4 PDB entries)
    1. Domain for 1v80:
    2. Domain for 1v81:
    3. Domains for 3h1u:
      1. Domain d3h1ua_: 3h1u A: [246462]
        automated match to d4auqc_
        complexed with cd
      2. Domain d3h1ub_: 3h1u B: [246463]
        automated match to d4auqc_
        complexed with cd
    4. Domain for 4bbn:
  6. Entamoeba (Entamoeba histolytica) [TaxId:5759] [193323] (2 PDB entries)
    1. Domains for 4gsw:
      1. Domain d4gswa1: 4gsw A:4-75 [193324]
        Other proteins in same PDB: d4gswa2
        automated match to d3nheb_
        complexed with so4
      2. Domain d4gswb_: 4gsw B: [202298]
        Other proteins in same PDB: d4gswa2
        automated match to d4gswa_
        complexed with so4
    2. Domain for 4gu2:
  7. House fly (Musca domestica) [TaxId:7370] [341246] (1 PDB entry)
  8. Human (Homo sapiens) [TaxId:9606] [189560] (112 PDB entries)
    1. Domain for 1wyw:
    2. Domain for 1xqq:
    3. Domains for 1y8r:
      1. Domain d1y8rc_: 1y8r C: [122761]
        automated match to d1a5r__
        complexed with atp, mg, zn
      2. Domain d1y8rf_: 1y8r F: [122762]
        automated match to d1a5r__
        complexed with atp, mg, zn
    4. Domain for 1z5s:
    5. Domain for 2awt:
    6. Domains for 2bgf:
      1. Domain d2bgfa_: 2bgf A: [128476]
        automated match to d4auqc_
      2. Domain d2bgfb_: 2bgf B: [128477]
        automated match to d4auqc_
    7. Domain for 2bkr:
    8. Domain for 2c9w:
    9. Domain for 2d07:
    10. Domains for 2g4d:
      1. Domain d2g4db_: 2g4d B: [134590]
        Other proteins in same PDB: d2g4da1, d2g4dc_
        automated match to d1y8rc_
        mutant
      2. Domain d2g4dd_: 2g4d D: [134591]
        Other proteins in same PDB: d2g4da1, d2g4dc_
        automated match to d1y8rc_
        mutant
    11. Domains for 2gbj:
      1. Domain d2gbja_: 2gbj A: [164626]
        automated match to d1aara_
        mutant
      2. Domain d2gbjb_: 2gbj B: [164627]
        automated match to d1aara_
        mutant
    12. Domains for 2gbk:
      1. Domain d2gbka_: 2gbk A: [164628]
        automated match to d1aara_
        mutant
      2. Domain d2gbkb_: 2gbk B: [164629]
        automated match to d1aara_
        mutant
      3. Domain d2gbkc_: 2gbk C: [164630]
        automated match to d1aara_
        mutant
      4. Domain d2gbkd_: 2gbk D: [164631]
        automated match to d1aara_
        mutant
    13. Domains for 2gbm:
      1. Domain d2gbma_: 2gbm A: [164632]
        automated match to d1aara_
        complexed with ars; mutant
      2. Domain d2gbmb_: 2gbm B: [164633]
        automated match to d1aara_
        complexed with ars; mutant
      3. Domain d2gbmc_: 2gbm C: [164634]
        automated match to d1aara_
        complexed with ars; mutant
      4. Domain d2gbmd_: 2gbm D: [164635]
        automated match to d1aara_
        complexed with ars; mutant
    14. Domain for 2gbn:
    15. Domains for 2gbr:
      1. Domain d2gbra_: 2gbr A: [164637]
        automated match to d1aara_
        complexed with cd; mutant
      2. Domain d2gbrb_: 2gbr B: [164638]
        automated match to d1aara_
        complexed with cd; mutant
      3. Domain d2gbrc_: 2gbr C: [164639]
        automated match to d1aara_
        complexed with cd; mutant
    16. Domains for 2io1:
      1. Domain d2io1b_: 2io1 B: [137537]
        Other proteins in same PDB: d2io1a_, d2io1c_, d2io1e_
        automated match to d1wm2a_
      2. Domain d2io1d_: 2io1 D: [137538]
        Other proteins in same PDB: d2io1a_, d2io1c_, d2io1e_
        automated match to d1wm2a_
      3. Domain d2io1f_: 2io1 F: [137539]
        Other proteins in same PDB: d2io1a_, d2io1c_, d2io1e_
        automated match to d1wm2a_
    17. Domain for 2izv:
    18. Domain for 2jz3:
    19. Domain for 2klg:
    20. Domain for 2kx3:
    21. Domain for 2l0t:
    22. Domain for 2lgd:
    23. Domain for 2lj5:
    24. Domain for 2m0x:
    25. Domain for 2m17:
    26. Domain for 2mjb:
    27. Domain for 2n1w:
    28. Domain for 2nbd:
      • Domain d2nbda1: 2nbd A:1-59 [317559]
        Other proteins in same PDB: d2nbda2
        automated match to d2k39a_
        mutant

        fragment; missing more than one-third of the common structure and/or sequence
    29. Domain for 2nbe:
    30. Domain for 2nr2:
    31. Domains for 2o6v:
      1. Domain d2o6vb_: 2o6v B: [138923]
        Other proteins in same PDB: d2o6va_, d2o6vc_, d2o6vd1, d2o6ve_, d2o6vg_, d2o6vh_
        automated match to d1aara_
        complexed with mes, so4
      2. Domain d2o6vf_: 2o6v F: [138926]
        Other proteins in same PDB: d2o6va_, d2o6vc_, d2o6vd1, d2o6ve_, d2o6vg_, d2o6vh_
        automated match to d1aara_
        complexed with mes, so4
    32. Domains for 2pe9:
      1. Domain d2pe9a_: 2pe9 A: [149399]
        automated match to d4auqc_
      2. Domain d2pe9b_: 2pe9 B: [149400]
        automated match to d4auqc_
    33. Domains for 2pea:
      1. Domain d2peaa_: 2pea A: [149401]
        automated match to d4auqc_
      2. Domain d2peab_: 2pea B: [149402]
        automated match to d4auqc_
    34. Domains for 2w9n:
      1. Domain d2w9na1: 2w9n A:1-76 [244066]
        automated match to d4auqc_
        complexed with cl, zn
      2. Domain d2w9na2: 2w9n A:77-149 [244067]
        automated match to d4auqc_
        complexed with cl, zn
    35. Domain for 2wyq:
    36. Domains for 2xk5:
      1. Domain d2xk5a_: 2xk5 A: [244533]
        automated match to d4auqc_
        complexed with zn
      2. Domain d2xk5b_: 2xk5 B: [244534]
        automated match to d4auqc_
        complexed with zn
    37. Domains for 2y5b:
      1. Domain d2y5bb1: 2y5b B:1-73 [239020]
        Other proteins in same PDB: d2y5ba_, d2y5be_
        automated match to d3nobh_
        complexed with so4, zn
      2. Domain d2y5bb2: 2y5b B:76-152 [239021]
        Other proteins in same PDB: d2y5ba_, d2y5be_
        automated match to d3nobh_
        complexed with so4, zn
      3. Domain d2y5bf1: 2y5b F:1-75 [239022]
        Other proteins in same PDB: d2y5ba_, d2y5be_
        automated match to d3nobh_
        complexed with so4, zn
      4. Domain d2y5bf2: 2y5b F:76-152 [239023]
        Other proteins in same PDB: d2y5ba_, d2y5be_
        automated match to d3nobh_
        complexed with so4, zn
    38. Domains for 2zcb:
      1. Domain d2zcba_: 2zcb A: [154336]
        automated match to d1aara_
        complexed with zn
      2. Domain d2zcbb_: 2zcb B: [161592]
        automated match to d1aara_
        complexed with zn
      3. Domain d2zcbc_: 2zcb C: [161593]
        automated match to d1aara_
        complexed with zn
    39. Domains for 2zvn:
      1. Domain d2zvna1: 2zvn A:1-76 [244990]
        Other proteins in same PDB: d2zvnc3
        automated match to d4auqc_
      2. Domain d2zvna2: 2zvn A:77-148 [244991]
        Other proteins in same PDB: d2zvnc3
        automated match to d4auqc_
      3. Domain d2zvnc1: 2zvn C:1-76 [244992]
        Other proteins in same PDB: d2zvnc3
        automated match to d4auqc_
      4. Domain d2zvnc2: 2zvn C:77-148 [244993]
        Other proteins in same PDB: d2zvnc3
        automated match to d4auqc_
      5. Domain d2zvne1: 2zvn E:1-76 [244994]
        Other proteins in same PDB: d2zvnc3
        automated match to d4auqc_
      6. Domain d2zvne2: 2zvn E:77-146 [244995]
        Other proteins in same PDB: d2zvnc3
        automated match to d4auqc_
      7. Domain d2zvng1: 2zvn G:1-76 [244996]
        Other proteins in same PDB: d2zvnc3
        automated match to d4auqc_
      8. Domain d2zvng2: 2zvn G:77-146 [244997]
        Other proteins in same PDB: d2zvnc3
        automated match to d4auqc_
    40. Domains for 2zvo:
      1. Domain d2zvoa1: 2zvo A:1-76 [244998]
        Other proteins in same PDB: d2zvoa3
        automated match to d4auqc_
      2. Domain d2zvoa2: 2zvo A:77-148 [244999]
        Other proteins in same PDB: d2zvoa3
        automated match to d4auqc_
      3. Domain d2zvog1: 2zvo G:1-76 [245000]
        Other proteins in same PDB: d2zvoa3
        automated match to d4auqc_
      4. Domain d2zvog2: 2zvo G:77-146 [245001]
        Other proteins in same PDB: d2zvoa3
        automated match to d4auqc_
    41. Domain for 3jsv:
    42. Domain for 3k9p:
    43. Domains for 3nob:
      1. Domain d3noba1: 3nob A:1-75 [182440]
        Other proteins in same PDB: d3noba2, d3nobc2, d3nobd2, d3nobe2, d3nobh2
        automated match to d1aara_
        complexed with so4
      2. Domain d3nobb_: 3nob B: [182441]
        Other proteins in same PDB: d3noba2, d3nobc2, d3nobd2, d3nobe2, d3nobh2
        automated match to d1aara_
        complexed with so4
      3. Domain d3nobc1: 3nob C:1-74 [182442]
        Other proteins in same PDB: d3noba2, d3nobc2, d3nobd2, d3nobe2, d3nobh2
        automated match to d1aara_
        complexed with so4
      4. Domain d3nobd1: 3nob D:1-74 [182443]
        Other proteins in same PDB: d3noba2, d3nobc2, d3nobd2, d3nobe2, d3nobh2
        automated match to d1aara_
        complexed with so4
      5. Domain d3nobe1: 3nob E:1-74 [182444]
        Other proteins in same PDB: d3noba2, d3nobc2, d3nobd2, d3nobe2, d3nobh2
        automated match to d1aara_
        complexed with so4
      6. Domain d3nobf_: 3nob F: [182445]
        Other proteins in same PDB: d3noba2, d3nobc2, d3nobd2, d3nobe2, d3nobh2
        automated match to d1aara_
        complexed with so4
      7. Domain d3nobg_: 3nob G: [182446]
        Other proteins in same PDB: d3noba2, d3nobc2, d3nobd2, d3nobe2, d3nobh2
        automated match to d1aara_
        complexed with so4
      8. Domain d3nobh1: 3nob H:1-76 [182447]
        Other proteins in same PDB: d3noba2, d3nobc2, d3nobd2, d3nobe2, d3nobh2
        automated match to d1aara_
        complexed with so4
    44. Domain for 3phd:
      • Domain d3phdf_: 3phd F: [248503]
        automated match to d4auqc_
        complexed with zn

        fragment; missing more than one-third of the common structure and/or sequence
    45. Domains for 3pse:
      1. Domain d3pseb1: 3pse B:4-78 [233268]
        automated match to d1z2ma1
        complexed with 3cn, gol
      2. Domain d3pseb2: 3pse B:79-156 [233269]
        automated match to d1z2ma2
        complexed with 3cn, gol
    46. Domains for 3r66:
      1. Domain d3r66c2: 3r66 C:79-154 [233411]
        Other proteins in same PDB: d3r66a_, d3r66b_, d3r66c1, d3r66d1
        automated match to d1z2ma2
      2. Domain d3r66d2: 3r66 D:79-154 [233412]
        Other proteins in same PDB: d3r66a_, d3r66b_, d3r66c1, d3r66d1
        automated match to d1z2ma2
    47. Domains for 3rt3:
      1. Domain d3rt3b1: 3rt3 B:3-78 [233498]
        Other proteins in same PDB: d3rt3c_
        automated match to d1z2ma1
        complexed with sin
      2. Domain d3rt3b2: 3rt3 B:79-155 [233499]
        Other proteins in same PDB: d3rt3c_
        automated match to d1z2ma2
        complexed with sin
    48. Domains for 3rzw:
      1. Domain d3rzwc_: 3rzw C: [185230]
        Other proteins in same PDB: d3rzwa_, d3rzwb_
        automated match to d1a5ra_
        complexed with gol
      2. Domain d3rzwd_: 3rzw D: [185231]
        Other proteins in same PDB: d3rzwa_, d3rzwb_
        automated match to d1a5ra_
        complexed with gol
    49. Domains for 3sdl:
      1. Domain d3sdlc2: 3sdl C:79-154 [239725]
        Other proteins in same PDB: d3sdla_, d3sdlb_, d3sdlc1, d3sdld1
        automated match to d3r66c2
      2. Domain d3sdld2: 3sdl D:79-154 [239727]
        Other proteins in same PDB: d3sdla_, d3sdlb_, d3sdlc1, d3sdld1
        automated match to d3r66c2
    50. Domain for 3uin:
    51. Domain for 3uio:
    52. Domains for 3zkj:
      1. Domain d3zkjc_: 3zkj C: [201328]
        Other proteins in same PDB: d3zkjb_, d3zkje_
        complexed with cl, edo, peg
        fragment; missing more than one-third of the common structure and/or sequence
      2. Domain d3zkjf_: 3zkj F: [201330]
        Other proteins in same PDB: d3zkjb_, d3zkje_
        complexed with cl, edo, peg
    53. Domains for 3znz:
      1. Domain d3znzb1: 3znz B:1-76 [250808]
        automated match to d4auqc_
        complexed with so4
      2. Domain d3znzb2: 3znz B:77-146 [250809]
        automated match to d4auqc_
        complexed with so4
    54. Domain for 3zo5:
    55. Domains for 4ap4:
      1. Domain d4ap4c_: 4ap4 C: [194912]
        Other proteins in same PDB: d4ap4b1, d4ap4b2, d4ap4e_
        automated match to d3nobh_
        complexed with zn
      2. Domain d4ap4f_: 4ap4 F: [194913]
        Other proteins in same PDB: d4ap4b1, d4ap4b2, d4ap4e_
        automated match to d3nobh_
        complexed with zn
    56. Domains for 4auq:
      1. Domain d4auqc1: 4auq C:1-76 [194816]
        Other proteins in same PDB: d4auqa_, d4auqc2, d4auqd_
        automated match to d3nheb_
        complexed with zn
      2. Domain d4auqf_: 4auq F: [194818]
        Other proteins in same PDB: d4auqa_, d4auqc2, d4auqd_
        automated match to d3nheb_
        complexed with zn
    57. Domain for 4b95:
    58. Domain for 4bkg:
    59. Domains for 4boz:
      1. Domain d4bozb_: 4boz B: [251292]
        automated match to d4auqc_
        complexed with gol
      2. Domain d4bozc_: 4boz C: [251293]
        automated match to d4auqc_
        complexed with gol
      3. Domain d4boze_: 4boz E: [251294]
        automated match to d4auqc_
        complexed with gol
    60. Domains for 4dwf:
      1. Domain d4dwfa1: 4dwf A:13-90 [195743]
        Other proteins in same PDB: d4dwfa2, d4dwfb2
        automated match to d1wx9a1
        complexed with so4
      2. Domain d4dwfb1: 4dwf B:13-90 [201746]
        Other proteins in same PDB: d4dwfa2, d4dwfb2
        automated match to d4dwfa_
        complexed with so4
    61. Domains for 4eew:
      1. Domain d4eewa_: 4eew A: [201835]
        automated match to d4eewb_
      2. Domain d4eewb_: 4eew B: [195625]
        automated match to d1wx9a1
    62. Domain for 4hjk:
    63. Domains for 4hk2:
      1. Domain d4hk2a1: 4hk2 A:1-72 [202442]
        Other proteins in same PDB: d4hk2a2, d4hk2b2, d4hk2c2, d4hk2d2
        automated match to d4hk2c_
        complexed with so4
      2. Domain d4hk2b1: 4hk2 B:1-72 [202443]
        Other proteins in same PDB: d4hk2a2, d4hk2b2, d4hk2c2, d4hk2d2
        automated match to d4hk2c_
        complexed with so4
      3. Domain d4hk2c1: 4hk2 C:1-73 [193362]
        Other proteins in same PDB: d4hk2a2, d4hk2b2, d4hk2c2, d4hk2d2
        automated match to d3nobh_
        complexed with so4
      4. Domain d4hk2d1: 4hk2 D:1-74 [202444]
        Other proteins in same PDB: d4hk2a2, d4hk2b2, d4hk2c2, d4hk2d2
        automated match to d4hk2c_
        complexed with so4
    64. Domains for 4icu:
      1. Domain d4icua_: 4icu A: [256776]
        automated match to d1wjna_
      2. Domain d4icub_: 4icu B: [262716]
        automated match to d1wjna_
      3. Domain d4icuc_: 4icu C: [262717]
        automated match to d1wjna_
      4. Domain d4icud_: 4icu D: [262718]
        automated match to d1wjna_
    65. Domain for 4icv:
    66. Domains for 4msm:
      1. Domain d4msmb_: 4msm B: [266767]
        automated match to d3dbhi_
        complexed with edo, po4, zn; mutant
      2. Domain d4msmd_: 4msm D: [266768]
        automated match to d3dbhi_
        complexed with edo, po4, zn; mutant
    67. Domains for 4msq:
      1. Domain d4msqb1: 4msq B:1-76 [266771]
        Other proteins in same PDB: d4msqb2
        automated match to d3dbhi_
        complexed with edo, po4, zn
      2. Domain d4msqd_: 4msq D: [266772]
        Other proteins in same PDB: d4msqb2
        automated match to d3dbhi_
        complexed with edo, po4, zn
    68. Domains for 4pig:
      1. Domain d4piga_: 4pig A: [263493]
        automated match to d4pigd_
        complexed with ca, cl, na; mutant
      2. Domain d4pigb_: 4pig B: [263494]
        automated match to d4pigd_
        complexed with ca, cl, na; mutant
      3. Domain d4pigc_: 4pig C: [263495]
        automated match to d4pigd_
        complexed with ca, cl, na; mutant
      4. Domain d4pigd_: 4pig D: [260735]
        automated match to d4auqc_
        complexed with ca, cl, na; mutant
    69. Domains for 4pih:
      1. Domain d4piha_: 4pih A: [260737]
        automated match to d4auqc_
        complexed with ca, cl; mutant
      2. Domain d4pihb_: 4pih B: [263496]
        automated match to d4piha_
        complexed with ca, cl; mutant
    70. Domains for 4pij:
      1. Domain d4pija_: 4pij A: [260736]
        automated match to d3rula_
        complexed with gol, so4; mutant
      2. Domain d4pijb_: 4pij B: [263497]
        automated match to d4pija_
        complexed with gol, so4; mutant
    71. Domain for 4pqt:
    72. Domain for 4r62:
    73. Domains for 4s1z:
      1. Domain d4s1za_: 4s1z A: [271239]
        automated match to d2murb_
        complexed with zn
      2. Domain d4s1zb_: 4s1z B: [271237]
        automated match to d2murb_
        complexed with zn
      3. Domain d4s1zc_: 4s1z C: [271238]
        automated match to d2murb_
        complexed with zn
      4. Domain d4s1zd_: 4s1z D: [271236]
        automated match to d2murb_
        complexed with zn
      5. Domain d4s1ze_: 4s1z E: [271235]
        automated match to d2murb_
        complexed with zn
    74. Domains for 4v3k:
      1. Domain d4v3kb1: 4v3k B:1-76 [271276]
        Other proteins in same PDB: d4v3ka_, d4v3kb2, d4v3kd_, d4v3ke2
        automated match to d3dbhi_
        complexed with cl, edo, zn
      2. Domain d4v3ke1: 4v3k E:1-76 [271279]
        Other proteins in same PDB: d4v3ka_, d4v3kb2, d4v3kd_, d4v3ke2
        automated match to d3dbhi_
        complexed with cl, edo, zn
    75. Domains for 4v3l:
      1. Domain d4v3lb1: 4v3l B:1-76 [271283]
        Other proteins in same PDB: d4v3la_, d4v3lb2, d4v3ld2
        automated match to d3dbhi_
        complexed with edo, zn
      2. Domain d4v3ld1: 4v3l D:1-71 [271284]
        Other proteins in same PDB: d4v3la_, d4v3lb2, d4v3ld2
        automated match to d3dbhi_
        complexed with edo, zn
    76. Domain for 4wjn:
    77. Domain for 4wjo:
    78. Domains for 5af4:
      1. Domain d5af4a_: 5af4 A: [270195]
        automated match to d2murb_
        complexed with gol, so4
      2. Domain d5af4b_: 5af4 B: [270190]
        automated match to d2murb_
        complexed with gol, so4
      3. Domain d5af4c_: 5af4 C: [270193]
        automated match to d2murb_
        complexed with gol, so4
      4. Domain d5af4d_: 5af4 D: [270198]
        automated match to d2murb_
        complexed with gol, so4
      5. Domain d5af4e_: 5af4 E: [270197]
        automated match to d2murb_
        complexed with gol, so4
      6. Domain d5af4f_: 5af4 F: [270192]
        automated match to d2murb_
        complexed with gol, so4
      7. Domain d5af4g_: 5af4 G: [270191]
        automated match to d2murb_
        complexed with gol, so4
      8. Domain d5af4h_: 5af4 H: [270194]
        automated match to d2murb_
        complexed with gol, so4
    79. Domain for 5af5:
    80. Domain for 5b7a:
    81. Domain for 5ghd:
    82. Domain for 5hpk:
    83. Domains for 5hpl:
      1. Domain d5hplc1: 5hpl C:2-77 [316735]
        Other proteins in same PDB: d5hpla_, d5hplb_, d5hplc2, d5hpld2
        automated match to d4bbnf_
      2. Domain d5hpld1: 5hpl D:2-77 [316741]
        Other proteins in same PDB: d5hpla_, d5hplb_, d5hplc2, d5hpld2
        automated match to d4bbnf_
    84. Domain for 5j26:
    85. Domain for 5oxh:
    86. Domains for 5oxi:
      1. Domain d5oxia_: 5oxi A: [341859]
        automated match to d2k39a_
        complexed with so4; mutant
      2. Domain d5oxib_: 5oxi B: [341847]
        automated match to d2k39a_
        complexed with so4; mutant
    87. Domain for 5v69:
    88. Domains for 5vzw:
      1. Domain d5vzwc1: 5vzw C:1-76 [337633]
        Other proteins in same PDB: d5vzwa_, d5vzwb_, d5vzwc2, d5vzwd2
        automated match to d4k1rb_
        complexed with zn
      2. Domain d5vzwd1: 5vzw D:1-76 [337724]
        Other proteins in same PDB: d5vzwa_, d5vzwb_, d5vzwc2, d5vzwd2
        automated match to d4k1rb_
        complexed with zn
    89. Domains for 6cpm:
      1. Domain d6cpme_: 6cpm E: [362691]
        Other proteins in same PDB: d6cpmc1, d6cpmc2, d6cpmd1, d6cpmd2
        automated match to d3rula_
        complexed with ca, edo, gol, na, zn
      2. Domain d6cpmf_: 6cpm F: [362648]
        Other proteins in same PDB: d6cpmc1, d6cpmc2, d6cpmd1, d6cpmd2
        automated match to d3rula_
        complexed with ca, edo, gol, na, zn
    90. Domain for 6d4p:
    91. Domains for 6d68:
      1. Domain d6d68c1: 6d68 C:1-74 [369654]
        Other proteins in same PDB: d6d68c2, d6d68d2
        automated match to d5o6tc_
      2. Domain d6d68d1: 6d68 D:1-72 [369657]
        Other proteins in same PDB: d6d68c2, d6d68d2
        automated match to d5o6tc_
    92. Domains for 6dc6:
      1. Domain d6dc6b_: 6dc6 B: [358594]
        automated match to d4k1rb_
        complexed with mg, pop
      2. Domain d6dc6d_: 6dc6 D: [358442]
        automated match to d4k1rb_
        complexed with mg, pop
    93. Domains for 6dj9:
      1. Domain d6dj9g_: 6dj9 G: [362697]
        Other proteins in same PDB: d6dj9a_, d6dj9b_, d6dj9c_, d6dj9d_, d6dj9e_, d6dj9f_
        automated match to d4kskc_
      2. Domain d6dj9h_: 6dj9 H: [362731]
        Other proteins in same PDB: d6dj9a_, d6dj9b_, d6dj9c_, d6dj9d_, d6dj9e_, d6dj9f_
        automated match to d4kskc_
      3. Domain d6dj9i_: 6dj9 I: [362655]
        Other proteins in same PDB: d6dj9a_, d6dj9b_, d6dj9c_, d6dj9d_, d6dj9e_, d6dj9f_
        automated match to d4kskc_
      4. Domain d6dj9j_: 6dj9 J: [362658]
        Other proteins in same PDB: d6dj9a_, d6dj9b_, d6dj9c_, d6dj9d_, d6dj9e_, d6dj9f_
        automated match to d4kskc_
      5. Domain d6dj9k_: 6dj9 K: [362690]
        Other proteins in same PDB: d6dj9a_, d6dj9b_, d6dj9c_, d6dj9d_, d6dj9e_, d6dj9f_
        automated match to d4kskc_
      6. Domain d6dj9l_: 6dj9 L: [362659]
        Other proteins in same PDB: d6dj9a_, d6dj9b_, d6dj9c_, d6dj9d_, d6dj9e_, d6dj9f_
        automated match to d4kskc_
    94. Domain for 6j4i:
    95. Domain for 6nnq:
    96. Domains for 6ob1:
      1. Domain d6ob1a_: 6ob1 A: [373044]
        automated match to d4kskc_
      2. Domain d6ob1b_: 6ob1 B: [373031]
        automated match to d4kskc_
    97. Domains for 6uyo:
      1. Domain d6uyoa_: 6uyo A: [377623]
        automated match to d1y8rc_
        complexed with aly
      2. Domain d6uyoc_: 6uyo C: [377622]
        automated match to d1y8rc_
        complexed with aly
    98. Domain for 6uyp:
    99. Domain for 6uyq:
    100. Domain for 6uyr:
    101. Domains for 6uys:
      1. Domain d6uysa_: 6uys A: [377624]
        automated match to d1y8rc_
        complexed with aly, sep
      2. Domain d6uysc_: 6uys C: [377626]
        automated match to d1y8rc_
        complexed with aly, sep
    102. Domain for 6uyt:
    103. Domains for 6uyu:
      1. Domain d6uyua_: 6uyu A: [377612]
        automated match to d1y8rc_
        complexed with aly, sep
      2. Domain d6uyuc_: 6uyu C: [377614]
        automated match to d1y8rc_
        complexed with aly, sep
    104. Domain for 6uyv:
    105. Domains for 6uyx:
      1. Domain d6uyxa_: 6uyx A: [377621]
        automated match to d1y8rc_
        complexed with aly, sep
      2. Domain d6uyxc_: 6uyx C: [377618]
        automated match to d1y8rc_
        complexed with aly, sep
    106. Domain for 6uyy:
    107. Domains for 6uyz:
      1. Domain d6uyza_: 6uyz A: [377627]
        automated match to d1y8rc_
        complexed with aly, sep
      2. Domain d6uyzc_: 6uyz C: [377625]
        automated match to d1y8rc_
        complexed with aly, sep
    108. Domains for 6v7p:
      1. Domain d6v7pa_: 6v7p A: [383486]
        automated match to d1y8rc_
      2. Domain d6v7pc_: 6v7p C: [383457]
        automated match to d1y8rc_
    109. Domains for 6v7q:
      1. Domain d6v7qa_: 6v7q A: [383283]
        automated match to d1y8rc_
        complexed with sep
      2. Domain d6v7qc_: 6v7q C: [383274]
        automated match to d1y8rc_
        complexed with sep
    110. Domains for 6v7r:
      1. Domain d6v7ra_: 6v7r A: [383240]
        automated match to d1y8rc_
        complexed with aly
      2. Domain d6v7rc_: 6v7r C: [383222]
        automated match to d1y8rc_
        complexed with aly
    111. Domains for 6v7s:
      1. Domain d6v7sa_: 6v7s A: [383224]
        automated match to d1y8rc_
        complexed with aly, sep
      2. Domain d6v7sc_: 6v7s C: [383225]
        automated match to d1y8rc_
        complexed with aly, sep
    112. Domain for 6xog:
  9. Mouse (Mus musculus) [TaxId:10090] [187278] (3 PDB entries)
    1. Domains for 2znv:
      1. Domain d2znvb_: 2znv B: [154707]
        Other proteins in same PDB: d2znva_, d2znvc_, d2znvd_, d2znvf_
        automated match to d1aara_
        complexed with edo, zn
      2. Domain d2znve_: 2znv E: [154709]
        Other proteins in same PDB: d2znva_, d2znvc_, d2znvd_, d2znvf_
        automated match to d1aara_
        complexed with edo, zn
    2. Domain for 3b1l:
    3. Domain for 4jgh:
  10. Naegleria gruberi [TaxId:5762] [334686] (1 PDB entry)
  11. Paramecium tetraurelia strain d4-2 [TaxId:412030] [161334] (1 PDB entry)
  12. Pseudozyma antarctica [TaxId:84753] [329779] (1 PDB entry)
  13. Schistosoma margrebowiei [TaxId:48269] [378241] (1 PDB entry)
  14. Schizosaccharomyces pombe [TaxId:284812] [196615] (2 PDB entries)
    1. Domain for 4ii2:
    2. Domains for 4ii3:
      1. Domain d4ii3b_: 4ii3 B: [223182]
        automated match to d3dbhi_
        complexed with atp, ca, mg
      2. Domain d4ii3d_: 4ii3 D: [223183]
        automated match to d3dbhi_
        complexed with atp, ca, mg
  15. Fission yeast (Schizosaccharomyces pombe) [TaxId:4896] [372588] (1 PDB entry)
  16. Wheat (Triticum aestivum) [TaxId:4565] [372585] (1 PDB entry)

More info for Protein automated matches from d.15.1.1: Ubiquitin-related

Timeline for Protein automated matches from d.15.1.1: Ubiquitin-related: