| Class c: Alpha and beta proteins (a/b) [51349] (147 folds) |
| Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies) contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678 the first seven superfamilies have similar phosphate-binding sites |
Superfamily c.1.10: Aldolase [51569] (9 families) ![]() Common fold covers whole protein structure |
| Family c.1.10.0: automated matches [191319] (1 protein) not a true family |
| Protein automated matches [190115] (32 species) not a true protein |
| Acinetobacter baumannii [TaxId:575584] [189578] (10 PDB entries) |
| Domain d3puda_: 3pud A: [183974] automated match to d1dhpa_ complexed with gol, so4 |
| Domain d3pudb_: 3pud B: [183975] automated match to d1dhpa_ complexed with gol, so4 |
| Domain d3puea_: 3pue A: [183976] automated match to d1dhpa_ complexed with gol, lys, so4 |
| Domain d3pueb_: 3pue B: [183977] automated match to d1dhpa_ complexed with gol, lys, so4 |
| Domain d3pula_: 3pul A: [183978] automated match to d1dhpa_ complexed with act, gol, lys, so4 |
| Domain d3pulb_: 3pul B: [183979] automated match to d1dhpa_ complexed with act, gol, lys, so4 |
| Domain d3rk8a_: 3rk8 A: [185001] automated match to d1dhpa_ complexed with cl, gol, peg, pyr |
| Domain d3rk8b_: 3rk8 B: [185002] automated match to d1dhpa_ complexed with cl, gol, peg, pyr |
| Domain d3takb_: 3tak B: [192141] automated match to d3puda_ complexed with gol, peg, pyr |
| Domain d3tceb_: 3tce B: [192142] automated match to d3puda_ complexed with lyz |
| Domain d3tdfb_: 3tdf B: [192143] automated match to d3puda_ complexed with 2kt |
| Domain d3u8ga_: 3u8g A: [186110] automated match to d1dhpa_ complexed with oxl |
| Domain d3u8gb_: 3u8g B: [186111] automated match to d1dhpa_ complexed with oxl |
| Domain d3uqna_: 3uqn A: [186374] automated match to d1dhpa_ complexed with gol, oxm |
| Domain d3uqnb_: 3uqn B: [186375] automated match to d1dhpa_ complexed with gol, oxm |
| Domain d4dxva_: 4dxv A: [192351] automated match to d3puda_ complexed with cl, gol, mg |
| Domain d4dxvb_: 4dxv B: [192352] automated match to d3puda_ complexed with cl, gol, mg |
| Agrobacterium tumefaciens [TaxId:176299] [188284] (1 PDB entry) |
| Domain d3b4ua_: 3b4u A: [172425] automated match to d1xkya1 complexed with mg |
| Domain d3b4ub_: 3b4u B: [172426] automated match to d1xkya1 complexed with mg |
| Aquifex aeolicus [TaxId:63363] [187668] (1 PDB entry) |
| Domain d2ehha_: 2ehh A: [164030] automated match to d1xkya1 complexed with po4 |
| Domain d2ehhc_: 2ehh C: [164031] automated match to d1xkya1 complexed with po4 |
| Domain d2ehhd_: 2ehh D: [164032] automated match to d1xkya1 complexed with po4 |
| Domain d2ehhe_: 2ehh E: [164033] automated match to d1xkya1 complexed with po4 |
| Bacillus anthracis [TaxId:261594] [189622] (1 PDB entry) |
| Domain d3q94a_: 3q94 A: [184280] automated match to d1rv8a_ complexed with 13p, act, na, zn |
| Domain d3q94b_: 3q94 B: [184281] automated match to d1rv8a_ complexed with 13p, act, na, zn |
| Bacillus clausii [TaxId:66692] [188586] (1 PDB entry) |
| Domain d3e96a_: 3e96 A: [174769] automated match to d1xkya1 |
| Domain d3e96b_: 3e96 B: [174770] automated match to d1xkya1 |
| Bacillus subtilis [TaxId:1423] [193173] (1 PDB entry) |
| Domain d3r8rp_: 3r8r P: [193174] automated match to d1vpxe_ complexed with gol, so4 |
| Bartonella henselae [TaxId:38323] [189345] (1 PDB entry) |
| Domain d3mmta_: 3mmt A: [181427] automated match to d1j4ea_ complexed with 2fp |
| Domain d3mmtb_: 3mmt B: [181428] automated match to d1j4ea_ complexed with 2fp |
| Domain d3mmtc_: 3mmt C: [181429] automated match to d1j4ea_ complexed with 2fp |
| Domain d3mmtd_: 3mmt D: [181430] automated match to d1j4ea_ complexed with 2fp |
| Burkholderia ambifaria [TaxId:398577] [196224] (1 PDB entry) |
| Domain d3t4cd_: 3t4c D: [196225] automated match to d3undb_ |
| Burkholderia cenocepacia [TaxId:216591] [196152] (1 PDB entry) |
| Domain d3tmld_: 3tml D: [196153] automated match to d3undb_ complexed with cl, so4 |
| Campylobacter jejuni [TaxId:197] [189316] (1 PDB entry) |
| Domain d3m5va_: 3m5v A: [180882] automated match to d1o5ka_ complexed with cl, fmt, peg, so4 |
| Domain d3m5vb_: 3m5v B: [180883] automated match to d1o5ka_ complexed with cl, fmt, peg, so4 |
| Domain d3m5vc_: 3m5v C: [180884] automated match to d1o5ka_ complexed with cl, fmt, peg, so4 |
| Domain d3m5vd_: 3m5v D: [180885] automated match to d1o5ka_ complexed with cl, fmt, peg, so4 |
| Clostridium difficile [TaxId:272563] [189051] (2 PDB entries) |
| Domain d3js3a_: 3js3 A: [178750] automated match to d1gqna_ complexed with dhs |
| Domain d3js3b_: 3js3 B: [178751] automated match to d1gqna_ complexed with dhs |
| Domain d3js3c_: 3js3 C: [178752] automated match to d1gqna_ complexed with dhs |
| Domain d3js3d_: 3js3 D: [178753] automated match to d1gqna_ complexed with dhs |
| Domain d4h3dd_: 4h3d D: [193493] automated match to d3js3a_ complexed with act, peg, pge, shl |
| Francisella tularensis [TaxId:119856] [196145] (1 PDB entry) |
| Domain d3tqka_: 3tqk A: [196146] automated match to d1kfla_ complexed with act, ca, mn |
| Francisella tularensis [TaxId:177416] [189018] (1 PDB entry) |
| Domain d3igxa_: 3igx A: [178319] automated match to d1onra_ complexed with po4 |
| Domain d3igxb_: 3igx B: [178320] automated match to d1onra_ complexed with po4 |
| Geobacillus kaustophilus [TaxId:235909] [188221] (1 PDB entry) |
| Domain d2yr1a_: 2yr1 A: [170870] automated match to d1gqna_ |
| Domain d2yr1b_: 2yr1 B: [170871] automated match to d1gqna_ |
| Giardia intestinalis [TaxId:5741] [187874] (6 PDB entries) |
| Domain d2isva_: 2isv A: [165680] automated match to d1rv8a_ complexed with pgh, zn |
| Domain d2isvb_: 2isv B: [165681] automated match to d1rv8a_ complexed with pgh, zn |
| Domain d2iswa_: 2isw A: [165682] automated match to d1rv8a_ complexed with pgh, zn |
| Domain d2iswb_: 2isw B: [165683] automated match to d1rv8a_ complexed with pgh, zn |
| Domain d3gaka_: 3gak A: [176479] automated match to d1rv8a_ complexed with so4, zn |
| Domain d3gakb_: 3gak B: [176480] automated match to d1rv8a_ complexed with so4, zn |
| Domain d3gaya_: 3gay A: [176487] automated match to d1rv8a_ complexed with p6t, zn |
| Domain d3gayb_: 3gay B: [176488] automated match to d1rv8a_ complexed with p6t, zn |
| Domain d3gb6a_: 3gb6 A: [176490] automated match to d1rv8a_ complexed with p6f, zn; mutant |
| Domain d3gb6b_: 3gb6 B: [176491] automated match to d1rv8a_ complexed with p6f, zn; mutant |
| Domain d3ohia_: 3ohi A: [183027] automated match to d1rv8a_ complexed with hdx, zn |
| Domain d3ohib_: 3ohi B: [183028] automated match to d1rv8a_ complexed with hdx, zn |
| Hahella chejuensis [TaxId:158327] [188235] (1 PDB entry) |
| Domain d2rfga_: 2rfg A: [168081] automated match to d1dhpa_ complexed with eoh, mg |
| Domain d2rfgb_: 2rfg B: [168082] automated match to d1dhpa_ complexed with eoh, mg |
| Domain d2rfgc_: 2rfg C: [168083] automated match to d1dhpa_ complexed with eoh, mg |
| Domain d2rfgd_: 2rfg D: [168084] automated match to d1dhpa_ complexed with eoh, mg |
| Helicobacter pylori [TaxId:210] [188576] (3 PDB entries) |
| Domain d3c4ua_: 3c4u A: [173042] automated match to d1rv8a_ complexed with na, zn |
| Domain d3c4ub_: 3c4u B: [173043] automated match to d1rv8a_ complexed with na, zn |
| Domain d3c52a_: 3c52 A: [173044] automated match to d1rv8a_ complexed with ca, na, pgh, zn |
| Domain d3c52b_: 3c52 B: [173045] automated match to d1rv8a_ complexed with ca, na, pgh, zn |
| Domain d3c56a_: 3c56 A: [173046] automated match to d1rv8a_ complexed with ph4, zn |
| Domain d3c56b_: 3c56 B: [173047] automated match to d1rv8a_ complexed with ph4, zn |
| Helicobacter pylori [TaxId:290847] [189516] (2 PDB entries) |
| Domain d3n9ra_: 3n9r A: [182095] automated match to d1rv8a_ complexed with cl, na, td3, zn |
| Domain d3n9rb_: 3n9r B: [182096] automated match to d1rv8a_ complexed with cl, na, td3, zn |
| Domain d3n9re_: 3n9r e: [182097] automated match to d1rv8a_ complexed with cl, na, td3, zn |
| Domain d3n9rj_: 3n9r j: [182098] automated match to d1rv8a_ complexed with cl, na, td3, zn |
| Domain d3n9rk_: 3n9r K: [182099] automated match to d1rv8a_ complexed with cl, na, td3, zn |
| Domain d3n9rp_: 3n9r P: [182100] automated match to d1rv8a_ complexed with cl, na, td3, zn |
| Domain d3n9ru_: 3n9r U: [182101] automated match to d1rv8a_ complexed with cl, na, td3, zn |
| Domain d3n9rz_: 3n9r Z: [182102] automated match to d1rv8a_ complexed with cl, na, td3, zn |
| Domain d3n9sa_: 3n9s A: [182103] automated match to d1rv8a_ complexed with ca, na, td4, zn |
| Domain d3n9sb_: 3n9s B: [182104] automated match to d1rv8a_ complexed with ca, na, td4, zn |
| Human (Homo sapiens) [TaxId:9606] [189772] (2 PDB entries) |
| Domain d3s5na_: 3s5n A: [185290] automated match to d1xkya1 complexed with edo, k, na |
| Domain d3s5oa_: 3s5o A: [185291] automated match to d1xkya1 complexed with edo, k |
| Methanocaldococcus jannaschii [TaxId:2190] [188253] (3 PDB entries) |
| Domain d2qjga_: 2qjg A: [167624] automated match to d1ojxa_ complexed with f2p |
| Domain d2qjgb_: 2qjg B: [167625] automated match to d1ojxa_ complexed with f2p |
| Domain d2qjgc_: 2qjg C: [167626] automated match to d1ojxa_ complexed with f2p |
| Domain d2qjgd_: 2qjg D: [167627] automated match to d1ojxa_ complexed with f2p |
| Domain d2qjge_: 2qjg E: [167628] automated match to d1ojxa_ complexed with f2p |
| Domain d2qjgf_: 2qjg F: [167629] automated match to d1ojxa_ complexed with f2p |
| Domain d2qjgg_: 2qjg G: [167630] automated match to d1ojxa_ complexed with f2p |
| Domain d2qjgh_: 2qjg H: [167631] automated match to d1ojxa_ complexed with f2p |
| Domain d2qjgi_: 2qjg I: [167632] automated match to d1ojxa_ complexed with f2p |
| Domain d2qjgj_: 2qjg J: [167633] automated match to d1ojxa_ complexed with f2p |
| Domain d2qjgk_: 2qjg K: [167634] automated match to d1ojxa_ complexed with f2p |
| Domain d2qjgl_: 2qjg L: [167635] automated match to d1ojxa_ complexed with f2p |
| Domain d2qjgm_: 2qjg M: [167636] automated match to d1ojxa_ complexed with f2p |
| Domain d2qjgn_: 2qjg N: [167637] automated match to d1ojxa_ complexed with f2p |
| Domain d2qjgo_: 2qjg O: [167638] automated match to d1ojxa_ complexed with f2p |
| Domain d2qjgp_: 2qjg P: [167639] automated match to d1ojxa_ complexed with f2p |
| Domain d2qjgq_: 2qjg Q: [167640] automated match to d1ojxa_ complexed with f2p |
| Domain d2qjgr_: 2qjg R: [167641] automated match to d1ojxa_ complexed with f2p |
| Domain d2qjgs_: 2qjg S: [167642] automated match to d1ojxa_ complexed with f2p |
| Domain d2qjgt_: 2qjg T: [167643] automated match to d1ojxa_ complexed with f2p |
| Domain d2qjha_: 2qjh A: [167644] automated match to d1ojxa_ complexed with 13p |
| Domain d2qjhb_: 2qjh B: [167645] automated match to d1ojxa_ complexed with 13p |
| Domain d2qjhc_: 2qjh C: [167646] automated match to d1ojxa_ complexed with 13p |
| Domain d2qjhd_: 2qjh D: [167647] automated match to d1ojxa_ complexed with 13p |
| Domain d2qjhe_: 2qjh E: [167648] automated match to d1ojxa_ complexed with 13p |
| Domain d2qjhf_: 2qjh F: [167649] automated match to d1ojxa_ complexed with 13p |
| Domain d2qjhg_: 2qjh G: [167650] automated match to d1ojxa_ complexed with 13p |
| Domain d2qjhh_: 2qjh H: [167651] automated match to d1ojxa_ complexed with 13p |
| Domain d2qjhi_: 2qjh I: [167652] automated match to d1ojxa_ complexed with 13p |
| Domain d2qjhj_: 2qjh J: [167653] automated match to d1ojxa_ complexed with 13p |
| Domain d2qjhk_: 2qjh K: [167654] automated match to d1ojxa_ complexed with 13p |
| Domain d2qjhl_: 2qjh L: [167655] automated match to d1ojxa_ complexed with 13p |
| Domain d2qjhm_: 2qjh M: [167656] automated match to d1ojxa_ complexed with 13p |
| Domain d2qjhn_: 2qjh N: [167657] automated match to d1ojxa_ complexed with 13p |
| Domain d2qjho_: 2qjh O: [167658] automated match to d1ojxa_ complexed with 13p |
| Domain d2qjhp_: 2qjh P: [167659] automated match to d1ojxa_ complexed with 13p |
| Domain d2qjhq_: 2qjh Q: [167660] automated match to d1ojxa_ complexed with 13p |
| Domain d2qjhr_: 2qjh R: [167661] automated match to d1ojxa_ complexed with 13p |
| Domain d2qjhs_: 2qjh S: [167662] automated match to d1ojxa_ complexed with 13p |
| Domain d2qjht_: 2qjh T: [167663] automated match to d1ojxa_ complexed with 13p |
| Domain d2qjia_: 2qji A: [167664] automated match to d1ojxa_ complexed with 13p, gol |
| Domain d2qjib_: 2qji B: [167665] automated match to d1ojxa_ complexed with 13p, gol |
| Domain d2qjic_: 2qji C: [167666] automated match to d1ojxa_ complexed with 13p, gol |
| Domain d2qjid_: 2qji D: [167667] automated match to d1ojxa_ complexed with 13p, gol |
| Domain d2qjie_: 2qji E: [167668] automated match to d1ojxa_ complexed with 13p, gol |
| Domain d2qjif_: 2qji F: [167669] automated match to d1ojxa_ complexed with 13p, gol |
| Domain d2qjig_: 2qji G: [167670] automated match to d1ojxa_ complexed with 13p, gol |
| Domain d2qjih_: 2qji H: [167671] automated match to d1ojxa_ complexed with 13p, gol |
| Domain d2qjii_: 2qji I: [167672] automated match to d1ojxa_ complexed with 13p, gol |
| Domain d2qjij_: 2qji J: [167673] automated match to d1ojxa_ complexed with 13p, gol |
| Domain d2qjik_: 2qji K: [167674] automated match to d1ojxa_ complexed with 13p, gol |
| Domain d2qjil_: 2qji L: [167675] automated match to d1ojxa_ complexed with 13p, gol |
| Domain d2qjim_: 2qji M: [167676] automated match to d1ojxa_ complexed with 13p, gol |
| Domain d2qjin_: 2qji N: [167677] automated match to d1ojxa_ complexed with 13p, gol |
| Domain d2qjio_: 2qji O: [167678] automated match to d1ojxa_ complexed with 13p, gol |
| Domain d2qjip_: 2qji P: [167679] automated match to d1ojxa_ complexed with 13p, gol |
| Domain d2qjiq_: 2qji Q: [167680] automated match to d1ojxa_ complexed with 13p, gol |
| Domain d2qjir_: 2qji R: [167681] automated match to d1ojxa_ complexed with 13p, gol |
| Domain d2qjis_: 2qji S: [167682] automated match to d1ojxa_ complexed with 13p, gol |
| Domain d2qjit_: 2qji T: [167683] automated match to d1ojxa_ complexed with 13p, gol |
| Mycobacterium avium [TaxId:243243] [189378] (1 PDB entry) |
| Domain d3ng3a_: 3ng3 A: [182244] automated match to d1j2wa_ complexed with cl, edo, unl |
| Domain d3ng3b_: 3ng3 B: [182245] automated match to d1j2wa_ complexed with cl, edo, unl |
| Domain d3ng3c_: 3ng3 C: [182246] automated match to d1j2wa_ complexed with cl, edo, unl |
| Domain d3ng3d_: 3ng3 D: [182247] automated match to d1j2wa_ complexed with cl, edo, unl |
| Mycobacterium smegmatis [TaxId:1772] [196434] (1 PDB entry) |
| Domain d3ndob_: 3ndo B: [196435] automated match to d3ng3a_ complexed with gol, nh4, unl |
| Neisseria meningitidis [TaxId:491] [188931] (1 PDB entry) |
| Domain d3flua_: 3flu A: [175895] automated match to d1dhpa_ complexed with gol, so4 |
| Domain d3flub_: 3flu B: [175896] automated match to d1dhpa_ complexed with gol, so4 |
| Domain d3fluc_: 3flu C: [175897] automated match to d1dhpa_ complexed with gol, so4 |
| Domain d3flud_: 3flu D: [175898] automated match to d1dhpa_ complexed with gol, so4 |
| Oceanobacillus iheyensis [TaxId:221109] [188435] (1 PDB entry) |
| Domain d3d0ca_: 3d0c A: [173598] automated match to d1xkya1 |
| Domain d3d0cb_: 3d0c B: [173599] automated match to d1xkya1 |
| Rhizobium meliloti (Sinorhizobium meliloti) [TaxId:382] [188471] (1 PDB entry) |
| Domain d2vc6a_: 2vc6 A: [168454] automated match to d1dhpa_ |
| Domain d2vc6b_: 2vc6 B: [168455] automated match to d1dhpa_ |
| Rhodopseudomonas palustris [TaxId:1076] [188556] (2 PDB entries) |
| Domain d3dz1a_: 3dz1 A: [174396] automated match to d1s5ta_ |
| Domain d3eb2a_: 3eb2 A: [174809] automated match to d1xkya1 complexed with pge |
| Domain d3eb2b_: 3eb2 B: [174810] automated match to d1xkya1 complexed with pge |
| Domain d3eb2c_: 3eb2 C: [174811] automated match to d1xkya1 complexed with pge |
| Domain d3eb2d_: 3eb2 D: [174812] automated match to d1xkya1 complexed with pge |
| Staphylococcus aureus [TaxId:282458] [188514] (1 PDB entry) |
| Domain d3daqa_: 3daq A: [173787] automated match to d1o5ka_ complexed with cl, gol |
| Domain d3daqb_: 3daq B: [173788] automated match to d1o5ka_ complexed with cl, gol |
| Domain d3daqc_: 3daq C: [173789] automated match to d1o5ka_ complexed with cl, gol |
| Domain d3daqd_: 3daq D: [173790] automated match to d1o5ka_ complexed with cl, gol |
| Staphylococcus aureus [TaxId:93061] [193178] (1 PDB entry) |
| Domain d4amac_: 4ama C: [193179] automated match to d1f74a_ |
| Staphylococcus aureus [TaxId:93062] [188553] (2 PDB entries) |
| Domain d3di0a_: 3di0 A: [173969] automated match to d1o5ka_ complexed with gol |
| Domain d3di0b_: 3di0 B: [173970] automated match to d1o5ka_ complexed with gol |
| Domain d3di1a_: 3di1 A: [173971] automated match to d1o5ka_ complexed with pyr |
| Domain d3di1b_: 3di1 B: [173972] automated match to d1o5ka_ complexed with pyr |
| Sulfolobus acidocaldarius [TaxId:330779] [187925] (3 PDB entries) |
| Domain d2nuwa_: 2nuw A: [166362] automated match to d1w37a_ complexed with mg |
| Domain d2nuwb_: 2nuw B: [166363] automated match to d1w37a_ complexed with mg |
| Domain d2nuxa_: 2nux A: [166364] automated match to d1w37a_ complexed with mg |
| Domain d2nuxb_: 2nux B: [166365] automated match to d1w37a_ complexed with mg |
| Domain d2nuya_: 2nuy A: [166366] automated match to d1w37a_ complexed with mg, pyr |
| Domain d2nuyb_: 2nuy B: [166367] automated match to d1w37a_ complexed with mg, pyr |
| Thermoproteus tenax [TaxId:2271] [188383] (2 PDB entries) |
| Domain d2r91a_: 2r91 A: [168013] automated match to d1w37a_ complexed with so4 |
| Domain d2r91b_: 2r91 B: [168014] automated match to d1w37a_ complexed with so4 |
| Domain d2r91c_: 2r91 C: [168015] automated match to d1w37a_ complexed with so4 |
| Domain d2r91d_: 2r91 D: [168016] automated match to d1w37a_ complexed with so4 |
| Domain d2r94a_: 2r94 A: [168017] automated match to d1w37a_ complexed with pyr |
| Domain d2r94b_: 2r94 B: [168018] automated match to d1w37a_ complexed with pyr |
| Domain d2r94c_: 2r94 C: [168019] automated match to d1w37a_ complexed with pyr |
| Domain d2r94d_: 2r94 D: [168020] automated match to d1w37a_ complexed with pyr |
| Thermus thermophilus [TaxId:300852] [186838] (2 PDB entries) |
| Domain d1wx0b_: 1wx0 B: [121383] Other proteins in same PDB: d1wx0a1 automated match to d1vpxa_ |
| Domain d1wx0c_: 1wx0 C: [121384] Other proteins in same PDB: d1wx0a1 automated match to d1vpxa_ |
| Domain d1wx0d_: 1wx0 D: [121385] Other proteins in same PDB: d1wx0a1 automated match to d1vpxa_ |
| Domain d1wx0e_: 1wx0 E: [121386] Other proteins in same PDB: d1wx0a1 automated match to d1vpxa_ |
| Domain d1wx0f_: 1wx0 F: [121387] Other proteins in same PDB: d1wx0a1 automated match to d1vpxa_ |
| Domain d1wx0g_: 1wx0 G: [121388] Other proteins in same PDB: d1wx0a1 automated match to d1vpxa_ |
| Domain d1wx0h_: 1wx0 H: [121389] Other proteins in same PDB: d1wx0a1 automated match to d1vpxa_ |
| Domain d1wx0i_: 1wx0 I: [121390] Other proteins in same PDB: d1wx0a1 automated match to d1vpxa_ |
| Domain d1wx0j_: 1wx0 J: [121391] Other proteins in same PDB: d1wx0a1 automated match to d1vpxa_ |
| Domain d2pcqa_: 2pcq A: [194640] automated match to d3s5na_ complexed with gol, k |
Timeline for Protein automated matches from c.1.10.0: automated matches: