Lineage for Protein: automated matches

  1. Root: SCOPe 2.03
  2. 1449807Class e: Multi-domain proteins (alpha and beta) [56572] (66 folds)
  3. 1453668Fold e.19: HydA/Nqo6-like [56769] (1 superfamily)
    2 domains: (1) alpa/beta; (2) Fe-S cluster-bound
  4. 1453669Superfamily e.19.1: HydA/Nqo6-like [56770] (3 families) (S)
  5. 1453670Family e.19.1.1: Nickel-iron hydrogenase, small subunit [56771] (2 proteins)
  6. 1453700Protein automated matches [190110] (5 species)
    not a true protein

Species:

  1. 1453701Desulfomicrobium baculatum [TaxId:899] [226720] (6 PDB entries)
    1. Domains for 4kl8:
      1. 1453708Domain d4kl8s_: 4kl8 S: [224353]
        Other proteins in same PDB: d4kl8l_, d4kl8m_
        automated match to d1cc1s_
        complexed with ca, cl, fco, gol, h2s, ni, sf4
      2. 1453709Domain d4kl8t_: 4kl8 T: [224354]
        Other proteins in same PDB: d4kl8l_, d4kl8m_
        automated match to d1cc1s_
        complexed with ca, cl, fco, gol, h2s, ni, sf4
    2. Domains for 4kn9:
      1. 1453702Domain d4kn9s_: 4kn9 S: [224405]
        Other proteins in same PDB: d4kn9l_, d4kn9m_
        automated match to d1cc1s_
        complexed with ca, cl, fco, gol, h2s, ni, sf4
      2. 1453703Domain d4kn9t_: 4kn9 T: [224406]
        Other proteins in same PDB: d4kn9l_, d4kn9m_
        automated match to d1cc1s_
        complexed with ca, cl, fco, gol, h2s, ni, sf4
    3. Domains for 4ko1:
      1. 1453704Domain d4ko1s_: 4ko1 S: [224417]
        Other proteins in same PDB: d4ko1l_, d4ko1m_
        automated match to d1cc1s_
        complexed with ca, fco, gol, h2s, ni, sf4
      2. 1453705Domain d4ko1t_: 4ko1 T: [224418]
        Other proteins in same PDB: d4ko1l_, d4ko1m_
        automated match to d1cc1s_
        complexed with ca, fco, gol, h2s, ni, sf4
    4. Domains for 4ko2:
      1. 1453706Domain d4ko2s_: 4ko2 S: [224421]
        Other proteins in same PDB: d4ko2l_, d4ko2m_
        automated match to d1cc1s_
        complexed with ca, fco, gol, h2s, ni, sf4
      2. 1453707Domain d4ko2t_: 4ko2 T: [224422]
        Other proteins in same PDB: d4ko2l_, d4ko2m_
        automated match to d1cc1s_
        complexed with ca, fco, gol, h2s, ni, sf4
    5. Domains for 4ko3:
      1. 1453712Domain d4ko3s_: 4ko3 S: [224425]
        Other proteins in same PDB: d4ko3l_, d4ko3m_
        automated match to d1cc1s_
        complexed with ca, cl, fco, gol, h2s, ni, sf4
      2. 1453713Domain d4ko3t_: 4ko3 T: [224426]
        Other proteins in same PDB: d4ko3l_, d4ko3m_
        automated match to d1cc1s_
        complexed with ca, cl, fco, gol, h2s, ni, sf4
    6. Domains for 4ko4:
      1. 1453710Domain d4ko4s_: 4ko4 S: [224429]
        Other proteins in same PDB: d4ko4l_, d4ko4m_
        automated match to d1cc1s_
        complexed with ca, cl, fco, gol, h2s, ni, sf4
      2. 1453711Domain d4ko4t_: 4ko4 T: [224430]
        Other proteins in same PDB: d4ko4l_, d4ko4m_
        automated match to d1cc1s_
        complexed with ca, cl, fco, gol, h2s, ni, sf4
  2. 1453714Desulfovibrio fructosovorans [TaxId:878] [188149] (5 PDB entries)
    1. Domains for 1yqw:
      1. 1453715Domain d1yqwa_: 1yqw A: [162279]
        Other proteins in same PDB: d1yqwq_, d1yqwr_, d1yqws_
        automated match to d1frfs_
        complexed with bct, f3s, fco, fe2, gol, mg, ni, per, sf4
      2. 1453716Domain d1yqwb_: 1yqw B: [162280]
        Other proteins in same PDB: d1yqwq_, d1yqwr_, d1yqws_
        automated match to d1frfs_
        complexed with bct, f3s, fco, fe2, gol, mg, ni, per, sf4
      3. 1453717Domain d1yqwc_: 1yqw C: [162281]
        Other proteins in same PDB: d1yqwq_, d1yqwr_, d1yqws_
        automated match to d1frfs_
        complexed with bct, f3s, fco, fe2, gol, mg, ni, per, sf4
    2. Domains for 1yrq:
      1. 1453718Domain d1yrqa_: 1yrq A: [162286]
        Other proteins in same PDB: d1yrqh_, d1yrqi_, d1yrqj_, d1yrqk_, d1yrqm_, d1yrqn_
        automated match to d1frfs_
        complexed with f3s, fco, mg, ni, sf4
      2. 1453719Domain d1yrqb_: 1yrq B: [162287]
        Other proteins in same PDB: d1yrqh_, d1yrqi_, d1yrqj_, d1yrqk_, d1yrqm_, d1yrqn_
        automated match to d1frfs_
        complexed with f3s, fco, mg, ni, sf4
      3. 1453720Domain d1yrqc_: 1yrq C: [162288]
        Other proteins in same PDB: d1yrqh_, d1yrqi_, d1yrqj_, d1yrqk_, d1yrqm_, d1yrqn_
        automated match to d1frfs_
        complexed with f3s, fco, mg, ni, sf4
      4. 1453721Domain d1yrqd_: 1yrq D: [162289]
        Other proteins in same PDB: d1yrqh_, d1yrqi_, d1yrqj_, d1yrqk_, d1yrqm_, d1yrqn_
        automated match to d1frfs_
        complexed with f3s, fco, mg, ni, sf4
      5. 1453722Domain d1yrqf_: 1yrq F: [162290]
        Other proteins in same PDB: d1yrqh_, d1yrqi_, d1yrqj_, d1yrqk_, d1yrqm_, d1yrqn_
        automated match to d1frfs_
        complexed with f3s, fco, mg, ni, sf4
      6. 1453723Domain d1yrqg_: 1yrq G: [162291]
        Other proteins in same PDB: d1yrqh_, d1yrqi_, d1yrqj_, d1yrqk_, d1yrqm_, d1yrqn_
        automated match to d1frfs_
        complexed with f3s, fco, mg, ni, sf4
    3. Domains for 3cur:
      1. 1453724Domain d3cura_: 3cur A: [173472]
        Other proteins in same PDB: d3curh_, d3curi_, d3curj_
        automated match to d1frfs_
        complexed with f3s, fco, gol, mg, ni, per, sf4; mutant
      2. 1453725Domain d3curb_: 3cur B: [173473]
        Other proteins in same PDB: d3curh_, d3curi_, d3curj_
        automated match to d1frfs_
        complexed with f3s, fco, gol, mg, ni, per, sf4; mutant
      3. 1453726Domain d3curc_: 3cur C: [173474]
        Other proteins in same PDB: d3curh_, d3curi_, d3curj_
        automated match to d1frfs_
        complexed with f3s, fco, gol, mg, ni, per, sf4; mutant
    4. Domains for 3cus:
      1. 1453727Domain d3cusa_: 3cus A: [173478]
        Other proteins in same PDB: d3cusq_, d3cusr_, d3cuss_
        automated match to d1frfs_
        complexed with f3s, fco, gol, mg, ni, sf4; mutant
      2. 1453728Domain d3cusb_: 3cus B: [173479]
        Other proteins in same PDB: d3cusq_, d3cusr_, d3cuss_
        automated match to d1frfs_
        complexed with f3s, fco, gol, mg, ni, sf4; mutant
      3. 1453729Domain d3cusc_: 3cus C: [173480]
        Other proteins in same PDB: d3cusq_, d3cusr_, d3cuss_
        automated match to d1frfs_
        complexed with f3s, fco, gol, mg, ni, sf4; mutant
    5. Domains for 3h3x:
      1. 1453730Domain d3h3xa_: 3h3x A: [177169]
        Other proteins in same PDB: d3h3xq_, d3h3xr_, d3h3xs_
        automated match to d1frfs_
        complexed with f3s, fco, gol, mg, ni, sf4; mutant
      2. 1453731Domain d3h3xb_: 3h3x B: [177170]
        Other proteins in same PDB: d3h3xq_, d3h3xr_, d3h3xs_
        automated match to d1frfs_
        complexed with f3s, fco, gol, mg, ni, sf4; mutant
      3. 1453732Domain d3h3xc_: 3h3x C: [177171]
        Other proteins in same PDB: d3h3xq_, d3h3xr_, d3h3xs_
        automated match to d1frfs_
        complexed with f3s, fco, gol, mg, ni, sf4; mutant
  3. 1453733Desulfovibrio gigas [TaxId:879] [186883] (1 PDB entry)
  4. 1453736Desulfovibrio vulgaris [TaxId:882] [197352] (5 PDB entries)
    1. Domain for 3ze6:
    2. Domain for 3ze7:
    3. Domain for 3ze8:
    4. Domain for 3ze9:
    5. Domain for 3zea:
  5. 1453742Desulfovibrio vulgaris [TaxId:883] [186834] (5 PDB entries)
    1. Domain for 1wuh:
    2. Domain for 1wui:
    3. Domain for 1wuj:
    4. Domain for 1wuk:
    5. Domain for 1wul:

More info for Protein automated matches from e.19.1.1: Nickel-iron hydrogenase, small subunit

Timeline for Protein automated matches from e.19.1.1: Nickel-iron hydrogenase, small subunit: