Lineage for Protein: automated matches

  1. Root: SCOPe 2.05
  2. 1715731Class a: All alpha proteins [46456] (286 folds)
  3. 1742882Fold a.102: alpha/alpha toroid [48207] (6 superfamilies)
    multihelical; up to seven alpha-hairpins are arranged in closed circular array; there may be sequence similarities between different superfamilies
  4. 1742883Superfamily a.102.1: Six-hairpin glycosidases [48208] (10 families) (S)
  5. 1743106Family a.102.1.0: automated matches [191318] (1 protein)
    not a true family
  6. 1743107Protein automated matches [190108] (11 species)
    not a true protein

Species:

  1. 1743108Anabaena sp. [TaxId:360069] [230753] (1 PDB entry)
  2. 1743111Bacillus halodurans [TaxId:272558] [186832] (1 PDB entry)
  3. 1743113Clostridium acetobutylicum [TaxId:272562] [274794] (1 PDB entry)
  4. 1743116Clostridium cellulovorans [TaxId:1493] [256855] (6 PDB entries)
    1. Domain for 4kih:
    2. Domain for 4kkf:
    3. Domain for 4kkk:
    4. Domain for 4xwl:
    5. Domain for 4xwm:
    6. Domain for 4xwn:
  5. 1743123Clostridium thermocellum [TaxId:1515] [255683] (1 PDB entry)
  6. 1743125Pneumococcus (Streptococcus pneumoniae) [TaxId:1313] [189664] (3 PDB entries)
    1. Domains for 3qpf:
      1. 1743130Domain d3qpfa_: 3qpf A: [184553]
        automated match to d2nvpa1
        complexed with edo
      2. 1743131Domain d3qpfb_: 3qpf B: [184554]
        automated match to d2nvpa1
        complexed with edo
    2. Domains for 3qry:
      1. 1743126Domain d3qrya_: 3qry A: [184599]
        automated match to d2nvpa1
        complexed with dmj, edo
      2. 1743127Domain d3qryb_: 3qry B: [184600]
        automated match to d2nvpa1
        complexed with dmj, edo
    3. Domains for 3qsp:
      1. 1743128Domain d3qspa_: 3qsp A: [184611]
        automated match to d2nvpa1
        complexed with edo
      2. 1743129Domain d3qspb_: 3qsp B: [184612]
        automated match to d2nvpa1
        complexed with edo
  7. 1743132Rhodothermus marinus [TaxId:29549] [230219] (4 PDB entries)
    1. Domain for 3wkf:
    2. Domain for 3wkg:
    3. Domain for 3wkh:
    4. Domain for 3wki:
  8. 1743137Streptococcus agalactiae [TaxId:1311] [225654] (1 PDB entry)
  9. 1743139Streptococcus agalactiae [TaxId:211110] [226492] (2 PDB entries)
    1. Domains for 3vxd:
      1. 1743140Domain d3vxda_: 3vxd A: [218140]
        automated match to d2fv1a_
        complexed with so4; mutant
      2. 1743141Domain d3vxdb_: 3vxd B: [218141]
        automated match to d2fv1a_
        complexed with so4; mutant
      3. 1743142Domain d3vxdc_: 3vxd C: [218142]
        automated match to d2fv1a_
        complexed with so4; mutant
      4. 1743143Domain d3vxdd_: 3vxd D: [218143]
        automated match to d2fv1a_
        complexed with so4; mutant
    2. Domain for 3wux:
  10. 1743145Streptococcus agalactiae [TaxId:216495] [225979] (3 PDB entries)
    1. Domain for 3ani:
    2. Domain for 3anj:
    3. Domain for 3ank:
  11. 1743149Worm (Eisenia fetida) [TaxId:6396] [256152] (1 PDB entry)

More info for Protein automated matches from a.102.1.0: automated matches

Timeline for Protein automated matches from a.102.1.0: automated matches: