Lineage for Protein: automated matches

  1. Root: SCOPe 2.04
  2. 1473060Class a: All alpha proteins [46456] (285 folds)
  3. Fold a.118: alpha-alpha superhelix [48370] (24 superfamilies)
    multihelical; 2 (curved) layers: alpha/alpha; right-handed superhelix
  4. 1501447Superfamily a.118.8: TPR-like [48452] (9 families) (S)
  5. 1501448Family a.118.8.1: Tetratricopeptide repeat (TPR) [48453] (18 proteins)
  6. 1501541Protein automated matches [190103] (4 species)
    not a true protein

Species:

  1. 1501542Bacillus subtilis [TaxId:1423] [161323] (1 PDB entry)
  2. 1501544Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [226182] (1 PDB entry)
  3. 1501546Human (Homo sapiens) [TaxId:9606] [186825] (10 PDB entries)
    1. Domain for 1wm5:
    2. Domain for 1ya0:
    3. Domain for 2c0l:
    4. Domains for 2c0m:
      1. 1501559Domain d2c0ma_: 2c0m A: [129596]
        automated match to d1fcha_
      2. 1501560Domain d2c0mb_: 2c0m B: [129597]
        automated match to d1fcha_
      3. 1501561Domain d2c0mc_: 2c0m C: [129598]
        automated match to d1fcha_
      4. 1501562Domain d2c0mf_: 2c0m F: [129599]
        automated match to d1fcha_
    5. Domains for 2j9q:
      1. 1501557Domain d2j9qa_: 2j9q A: [138152]
        automated match to d1fcha_
        complexed with sr
      2. 1501558Domain d2j9qb_: 2j9q B: [161474]
        automated match to d1fcha_
        complexed with sr
    6. Domain for 2v5f:
    7. Domains for 2vyi:
      1. 1501549Domain d2vyia_: 2vyi A: [153706]
        automated match to d2vyib_
      2. 1501550Domain d2vyib_: 2vyi B: [231362]
        automated match to d2vyia1
    8. Domains for 3r9a:
      1. 1501551Domain d3r9ab_: 3r9a B: [184856]
        Other proteins in same PDB: d3r9aa_, d3r9ac_
        automated match to d1fcha_
        complexed with btb
      2. 1501552Domain d3r9ad_: 3r9a D: [184858]
        Other proteins in same PDB: d3r9aa_, d3r9ac_
        automated match to d1fcha_
        complexed with btb
    9. Domains for 4kxk:
      1. 1501563Domain d4kxkb_: 4kxk B: [261081]
        Other proteins in same PDB: d4kxka_, d4kxkc_
        automated match to d2j9qa_
        complexed with bme, so4
      2. 1501564Domain d4kxkd_: 4kxk D: [261084]
        Other proteins in same PDB: d4kxka_, d4kxkc_
        automated match to d2j9qa_
        complexed with bme, so4
    10. Domains for 4kyo:
      1. 1501554Domain d4kyob_: 4kyo B: [261085]
        Other proteins in same PDB: d4kyoa_, d4kyoc_
        automated match to d2j9qa_
        complexed with bme, btb, so4
      2. 1501555Domain d4kyod_: 4kyo D: [261086]
        Other proteins in same PDB: d4kyoa_, d4kyoc_
        automated match to d2j9qa_
        complexed with bme, btb, so4
  4. 1501565Yersinia enterocolitica [TaxId:630] [161324] (1 PDB entry)

More info for Protein automated matches from a.118.8.1: Tetratricopeptide repeat (TPR)

Timeline for Protein automated matches from a.118.8.1: Tetratricopeptide repeat (TPR):